FFCP PHASE1:Hg19::chr17:67224950..67224970,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10349 | |EntrezGene=10349 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30 | |HGNC=30 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_uc010dfc.1_5end | |association_with_transcript=30bp_to_uc010dfc.1_5end | ||
|cluster_id=chr17:67224950..67224970,- | |||
|coexpression_cluster_id=C1791 | |||
|description=CAGE_peak_2_at_ABCA10_5end | |description=CAGE_peak_2_at_ABCA10_5end | ||
|id=chr17:67224950..67224970,- | |id=chr17:67224950..67224970,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.64e-09;3!UBERON:0003057;2.64e-09;3!UBERON:0006603;7.91e-08;65!UBERON:0005062;1.06e-07;4!UBERON:0007284;1.06e-07;4!UBERON:0006965;2.64e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.56e-66!115;UBERON:0001049!1.12e-19!57;UBERON:0005068!1.12e-19!57;UBERON:0006241!1.12e-19!57;UBERON:0007135!1.12e-19!57;UBERON:0003075!4.60e-16!86;UBERON:0007284!4.60e-16!86;UBERON:0002616!1.07e-15!59;UBERON:0002346!1.28e-15!90;UBERON:0003080!6.60e-14!42;UBERON:0001017!1.52e-13!82;UBERON:0005743!2.00e-13!86;UBERON:0000153!5.89e-13!129;UBERON:0007811!5.89e-13!129;UBERON:0000477!6.37e-13!286;UBERON:0002780!6.48e-13!41;UBERON:0001890!6.48e-13!41;UBERON:0006240!6.48e-13!41;UBERON:0000955!1.22e-12!69;UBERON:0006238!1.22e-12!69;UBERON:0004111!1.47e-12!241;UBERON:0000481!7.59e-12!347;UBERON:0000062!1.18e-11!511;UBERON:0000073!4.02e-11!94;UBERON:0001016!4.02e-11!94;UBERON:0000033!4.59e-11!123;UBERON:0002020!5.54e-11!34;UBERON:0003528!5.54e-11!34;UBERON:0001893!5.88e-11!34;UBERON:0000475!1.56e-10!365;UBERON:0002791!2.75e-10!33;UBERON:0002619!8.53e-10!22;UBERON:0002298!1.16e-09!8;UBERON:0001950!1.22e-09!20;UBERON:0001869!1.91e-09!32;UBERON:0000468!4.47e-09!659;UBERON:0004121!4.62e-09!169;UBERON:0003056!4.94e-09!61;UBERON:0000924!5.34e-09!173;UBERON:0006601!5.34e-09!173;UBERON:0000025!2.07e-08!194;UBERON:0000467!2.70e-08!625;UBERON:0000480!3.16e-08!626;UBERON:0000956!3.38e-08!25;UBERON:0000203!3.38e-08!25;UBERON:0000483!3.57e-07!309;UBERON:0000922!3.92e-07!612;UBERON:0003076!4.22e-07!15;UBERON:0003057!4.22e-07!15;UBERON:0001871!6.18e-07!7;UBERON:0000119!6.22e-07!312 | |ontology_enrichment_uberon=UBERON:0007023!2.56e-66!115;UBERON:0001049!1.12e-19!57;UBERON:0005068!1.12e-19!57;UBERON:0006241!1.12e-19!57;UBERON:0007135!1.12e-19!57;UBERON:0003075!4.60e-16!86;UBERON:0007284!4.60e-16!86;UBERON:0002616!1.07e-15!59;UBERON:0002346!1.28e-15!90;UBERON:0003080!6.60e-14!42;UBERON:0001017!1.52e-13!82;UBERON:0005743!2.00e-13!86;UBERON:0000153!5.89e-13!129;UBERON:0007811!5.89e-13!129;UBERON:0000477!6.37e-13!286;UBERON:0002780!6.48e-13!41;UBERON:0001890!6.48e-13!41;UBERON:0006240!6.48e-13!41;UBERON:0000955!1.22e-12!69;UBERON:0006238!1.22e-12!69;UBERON:0004111!1.47e-12!241;UBERON:0000481!7.59e-12!347;UBERON:0000062!1.18e-11!511;UBERON:0000073!4.02e-11!94;UBERON:0001016!4.02e-11!94;UBERON:0000033!4.59e-11!123;UBERON:0002020!5.54e-11!34;UBERON:0003528!5.54e-11!34;UBERON:0001893!5.88e-11!34;UBERON:0000475!1.56e-10!365;UBERON:0002791!2.75e-10!33;UBERON:0002619!8.53e-10!22;UBERON:0002298!1.16e-09!8;UBERON:0001950!1.22e-09!20;UBERON:0001869!1.91e-09!32;UBERON:0000468!4.47e-09!659;UBERON:0004121!4.62e-09!169;UBERON:0003056!4.94e-09!61;UBERON:0000924!5.34e-09!173;UBERON:0006601!5.34e-09!173;UBERON:0000025!2.07e-08!194;UBERON:0000467!2.70e-08!625;UBERON:0000480!3.16e-08!626;UBERON:0000956!3.38e-08!25;UBERON:0000203!3.38e-08!25;UBERON:0000483!3.57e-07!309;UBERON:0000922!3.92e-07!612;UBERON:0003076!4.22e-07!15;UBERON:0003057!4.22e-07!15;UBERON:0001871!6.18e-07!7;UBERON:0000119!6.22e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.73e-10;3!UBERON:0000946;3.73e-10;3!UBERON:0007023;6.06e-10;114!UBERON:0002240;2.64e-09;3!UBERON:0005174;2.64e-09;3!UBERON:0001137;2.64e-09;3!UBERON:0000341;1.12e-07;2!UBERON:0001905;1.53e-07;2!UBERON:0002757;1.53e-07;2!UBERON:0010134;1.53e-07;2!UBERON:0005408;1.53e-07;2!UBERON:0001899;1.53e-07;2!UBERON:0002081;1.74e-07;2!UBERON:0002133;2.06e-07;2!UBERON:0003127;2.86e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.51e-35,114;UBERON:0003978,3.57e-10,3;UBERON:0009751,3.57e-10,3;UBERON:0000946,3.57e-10,3;UBERON:0002523,3.57e-10,3;UBERON:0005983,3.57e-10,3;UBERON:0002165,3.57e-10,3;UBERON:0002062,3.57e-10,3;UBERON:0007280,3.57e-10,3;UBERON:0002240,2.57e-09,3;UBERON:0005174,2.57e-09,3;UBERON:0001137,2.57e-09,3;UBERON:0000341,1.12e-07,2;UBERON:0003103,1.25e-07,68;UBERON:0001905,1.58e-07,2;UBERON:0002757,1.58e-07,2;UBERON:0010134,1.58e-07,2;UBERON:0005408,1.58e-07,2;UBERON:0001899,1.58e-07,2;UBERON:0002081,1.69e-07,2;UBERON:0010227,1.69e-07,2;UBERON:0002133,1.91e-07,2;UBERON:0004797,3.00e-07,7;UBERON:0003127,3.14e-07,2 | |||
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|short_description=p2@ABCA10 | |short_description=p2@ABCA10 | ||
}} | }} |
Latest revision as of 01:10, 17 September 2015
Short description: | p2@ABCA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABCA10_5end |
Coexpression cluster: | C1791_skin_lung_heart_trachea_left_throat_uterus |
Association with transcript: | 30bp_to_uc010dfc.1_5end |
EntrezGene: | ABCA10 |
HGNC: | 30 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.51e-35 | 114 |
valve | 3.57e-10 | 3 |
cardiac mesenchyme | 3.57e-10 | 3 |
cardial valve | 3.57e-10 | 3 |
tunica intima | 3.57e-10 | 3 |
heart layer | 3.57e-10 | 3 |
endocardium | 3.57e-10 | 3 |
endocardial cushion | 3.57e-10 | 3 |
presumptive endocardium | 3.57e-10 | 3 |
spinal cord | 2.57e-09 | 3 |
dorsal region element | 2.57e-09 | 3 |
dorsum | 2.57e-09 | 3 |
throat | 1.12e-07 | 2 |
compound organ | 1.25e-07 | 68 |
pineal body | 1.58e-07 | 2 |
regional part of epithalamus | 1.58e-07 | 2 |
secretory circumventricular organ | 1.58e-07 | 2 |
circumventricular organ | 1.58e-07 | 2 |
epithalamus | 1.58e-07 | 2 |
cardiac atrium | 1.69e-07 | 2 |
future cardiac atrium | 1.69e-07 | 2 |
atrioventricular valve | 1.91e-07 | 2 |
blood vessel layer | 3.00e-07 | 7 |
open tracheal system trachea | 3.14e-07 | 2 |