FFCP PHASE1:Hg19::chr1:2489027..2489046,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8764 | |EntrezGene=8764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11912 | |HGNC=11912 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-205bp_to_ENST00000466750_5end | |association_with_transcript=-205bp_to_ENST00000466750_5end | ||
|cluster_id=chr1:2489027..2489046,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_17_at_TNFRSF14_5end | |description=CAGE_peak_17_at_TNFRSF14_5end | ||
|id=chr1:2489027..2489046,+ | |id=chr1:2489027..2489046,+ | ||
|ontology_enrichment_celltype=CL:0000147!1.63e-25!14;CL:0000148!1.32e-22!10;CL:0000541!1.32e-22!10;CL:0002567!4.66e-15!3;CL:0000710!8.84e-11!20;CL:0000149!1.09e-10!4;CL:0000325!4.38e-08!39;CL:0000075!1.03e-07!27;CL:0002144!7.17e-07!3 | |ontology_enrichment_celltype=CL:0000147!1.63e-25!14;CL:0000148!1.32e-22!10;CL:0000541!1.32e-22!10;CL:0002567!4.66e-15!3;CL:0000710!8.84e-11!20;CL:0000149!1.09e-10!4;CL:0000325!4.38e-08!39;CL:0000075!1.03e-07!27;CL:0002144!7.17e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.00e-61;10!CL:0000147;1.92e-43;14!CL:0002567;1.96e-38;3!CL:0000710;2.72e-30;20!CL:0000075;2.54e-22;27!CL:0002077;1.25e-15;34!CL:0002566;1.10e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.49e-61,10;CL:0000541,5.49e-61,10;CL:0000147,1.81e-43,14;CL:0002567,1.84e-38,3;CL:0000710,2.60e-30,20;CL:0000075,2.46e-22,27;CL:0002077,1.24e-17,34;CL:0000333,7.91e-14,41;CL:0002566,9.73e-14,1;CL:0000133,1.42e-09,59;CL:0000221,8.82e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.72e-13;1 | |||
|ontology_enrichment_disease=DOID:1909!1.46e-10!2;DOID:4929!1.90e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.07e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.08e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!2.82e-10!35;UBERON:0000160!6.07e-09!27;UBERON:0000966!1.68e-08!5;UBERON:0005388!1.68e-08!5;UBERON:0001802!1.68e-08!5;UBERON:0002108!3.33e-07!14;UBERON:0001915!7.17e-07!3;UBERON:0001982!7.17e-07!3 | |ontology_enrichment_uberon=UBERON:0005409!2.82e-10!35;UBERON:0000160!6.07e-09!27;UBERON:0000966!1.68e-08!5;UBERON:0005388!1.68e-08!5;UBERON:0001802!1.68e-08!5;UBERON:0002108!3.33e-07!14;UBERON:0001915!7.17e-07!3;UBERON:0001982!7.17e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;8.09e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,8.29e-11,4 | |||
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| ||
|short_description=p17@TNFRSF14 | |short_description=p17@TNFRSF14 | ||
}} | }} |
Latest revision as of 01:10, 17 September 2015
Short description: | p17@TNFRSF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_TNFRSF14_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -205bp_to_ENST00000466750_5end |
EntrezGene: | TNFRSF14 |
HGNC: | 11912 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.49e-61 | 10 |
melanoblast | 5.49e-61 | 10 |
pigment cell | 1.81e-43 | 14 |
light melanocyte | 1.84e-38 | 3 |
neurecto-epithelial cell | 2.60e-30 | 20 |
columnar/cuboidal epithelial cell | 2.46e-22 | 27 |
ecto-epithelial cell | 1.24e-17 | 34 |
migratory neural crest cell | 7.91e-14 | 41 |
dark melanocyte | 9.73e-14 | 1 |
neurectodermal cell | 1.42e-09 | 59 |
ectodermal cell | 8.82e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
small intestine | 8.29e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.08e-26 | 2 |