FFCP PHASE1:Hg19::chr11:17757300..17757307,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3746 | |EntrezGene=3746 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6233 | |HGNC=6233 | ||
|TSSclassifier=strong | |||
|UniProt=P48547,Q3KNS8 | |UniProt=P48547,Q3KNS8 | ||
|association_with_transcript=-187bp_to_NM_001112741,NM_004976,uc001mnk.3,uc009yhc.1_5end | |association_with_transcript=-187bp_to_NM_001112741,NM_004976,uc001mnk.3,uc009yhc.1_5end | ||
|cluster_id=chr11:17757300..17757307,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_14_at_KCNC1_5end | |description=CAGE_peak_14_at_KCNC1_5end | ||
|id=chr11:17757300..17757307,+ | |id=chr11:17757300..17757307,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.98e-131;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.52e-27!57;UBERON:0005068!6.52e-27!57;UBERON:0006241!6.52e-27!57;UBERON:0007135!6.52e-27!57;UBERON:0005743!1.64e-26!86;UBERON:0002616!5.95e-26!59;UBERON:0007023!1.61e-25!115;UBERON:0000955!2.72e-25!69;UBERON:0006238!2.72e-25!69;UBERON:0001017!2.26e-24!82;UBERON:0000073!7.76e-24!94;UBERON:0001016!7.76e-24!94;UBERON:0003075!2.21e-23!86;UBERON:0007284!2.21e-23!86;UBERON:0002346!2.95e-22!90;UBERON:0000033!1.54e-20!123;UBERON:0000153!1.74e-19!129;UBERON:0007811!1.74e-19!129;UBERON:0001869!4.70e-18!32;UBERON:0002780!8.39e-18!41;UBERON:0001890!8.39e-18!41;UBERON:0006240!8.39e-18!41;UBERON:0002791!1.69e-17!33;UBERON:0003080!2.31e-17!42;UBERON:0002020!5.68e-17!34;UBERON:0003528!5.68e-17!34;UBERON:0001893!5.68e-17!34;UBERON:0001950!2.19e-16!20;UBERON:0002037!4.08e-16!6;UBERON:0006215!4.08e-16!6;UBERON:0002619!6.24e-15!22;UBERON:0003056!1.88e-14!61;UBERON:0004121!3.19e-14!169;UBERON:0005383!3.87e-14!3;UBERON:0005382!3.87e-14!3;UBERON:0000924!7.68e-14!173;UBERON:0006601!7.68e-14!173;UBERON:0004733!8.55e-14!12;UBERON:0002028!8.55e-14!12;UBERON:0007277!8.55e-14!12;UBERON:0000956!3.62e-13!25;UBERON:0000203!3.62e-13!25;UBERON:0004732!9.46e-13!13;UBERON:0003112!1.18e-11!1;UBERON:0000032!1.18e-11!1;UBERON:0005253!1.18e-11!1;UBERON:0003128!1.18e-11!1;UBERON:0002241!1.18e-11!1;UBERON:0001703!1.18e-11!1;UBERON:0004761!1.18e-11!1;UBERON:0009617!1.18e-11!1;UBERON:0001874!2.68e-11!1;UBERON:0002902!2.96e-11!1;UBERON:0009899!2.96e-11!1;UBERON:0003076!4.45e-11!15;UBERON:0003057!4.45e-11!15;UBERON:0002022!6.00e-11!1;UBERON:0002680!6.25e-11!9;UBERON:0001895!6.25e-11!9;UBERON:0010092!6.25e-11!9;UBERON:0000369!7.72e-11!4;UBERON:0002435!7.72e-11!4;UBERON:0000204!7.72e-11!4;UBERON:0010082!7.72e-11!4;UBERON:0001872!7.55e-09!5;UBERON:0000064!8.06e-08!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.83e-66;6!UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.97e-34;12!UBERON:0002028;5.97e-34;12!UBERON:0004732;1.86e-31;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.83e-66,6;UBERON:0006215,2.83e-66,6;UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p14@KCNC1 | |short_description=p14@KCNC1 | ||
}} | }} |
Latest revision as of 01:05, 17 September 2015
Short description: | p14@KCNC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_KCNC1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -187bp_to_NM_001112741, NM_004976, uc001mnk.3, uc009yhc.1_5end |
EntrezGene: | KCNC1 |
HGNC: | 6233 |
UniProt: | P48547Q3KNS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.83e-66 | 6 |
rhombic lip | 2.83e-66 | 6 |
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |