FFCP PHASE1:Hg19::chr1:2487854..2487876,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8764 | |EntrezGene=8764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11912 | |HGNC=11912 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000482074_5end | |association_with_transcript=9bp_to_ENST00000482074_5end | ||
|cluster_id=chr1:2487854..2487876,+ | |||
|description=CAGE_peak_6_at_TNFRSF14_5end | |description=CAGE_peak_6_at_TNFRSF14_5end | ||
|id=chr1:2487854..2487876,+ | |id=chr1:2487854..2487876,+ | ||
|ontology_enrichment_celltype=CL:0000557!1.24e-18!71;CL:0000766!4.19e-18!76;CL:0000839!1.95e-17!70;CL:0002009!3.55e-16!65;CL:0002057!1.86e-15!42;CL:0002194!2.00e-15!63;CL:0000576!2.00e-15!63;CL:0000040!2.00e-15!63;CL:0000559!2.00e-15!63;CL:0000860!8.15e-13!45;CL:0000763!2.65e-11!112;CL:0000049!2.65e-11!112;CL:0000738!5.54e-11!140;CL:0002031!9.98e-11!124;CL:0000115!2.80e-10!35;CL:0002087!4.98e-09!119;CL:0002139!4.77e-08!24;CL:0002032!7.40e-08!165;CL:0000837!7.40e-08!165;CL:0000988!8.60e-08!182;CL:0000037!1.39e-07!172;CL:0000566!1.39e-07!172;CL:0002078!4.51e-07!44 | |ontology_enrichment_celltype=CL:0000557!1.24e-18!71;CL:0000766!4.19e-18!76;CL:0000839!1.95e-17!70;CL:0002009!3.55e-16!65;CL:0002057!1.86e-15!42;CL:0002194!2.00e-15!63;CL:0000576!2.00e-15!63;CL:0000040!2.00e-15!63;CL:0000559!2.00e-15!63;CL:0000860!8.15e-13!45;CL:0000763!2.65e-11!112;CL:0000049!2.65e-11!112;CL:0000738!5.54e-11!140;CL:0002031!9.98e-11!124;CL:0000115!2.80e-10!35;CL:0002087!4.98e-09!119;CL:0002139!4.77e-08!24;CL:0002032!7.40e-08!165;CL:0000837!7.40e-08!165;CL:0000988!8.60e-08!182;CL:0000037!1.39e-07!172;CL:0000566!1.39e-07!172;CL:0002078!4.51e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.95e-15;39!CL:0000234;2.95e-15;39!CL:0000860;3.34e-13;33!CL:0002057;3.34e-13;33!CL:0000576;1.16e-11;48!CL:0000115;3.87e-11;36!CL:0000766;6.33e-11;69!CL:0002139;2.18e-09;24!CL:0000235;2.75e-07;6 | |ontology_enrichment_celltype_v019=CL:0000473;2.95e-15;39!CL:0000234;2.95e-15;39!CL:0000860;3.34e-13;33!CL:0002057;3.34e-13;33!CL:0000576;1.16e-11;48!CL:0000115;3.87e-11;36!CL:0000766;6.33e-11;69!CL:0002139;2.18e-09;24!CL:0000235;2.75e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,6.73e-27,67;CL:0000766,1.29e-25,72;CL:0000839,1.24e-24,66;CL:0002009,8.99e-24,61;CL:0000473,1.11e-22,48;CL:0000234,1.11e-22,48;CL:0002194,1.17e-22,59;CL:0000576,1.17e-22,59;CL:0000040,1.17e-22,59;CL:0000559,1.17e-22,59;CL:0000860,1.53e-17,42;CL:0002057,1.53e-17,42;CL:0000763,1.31e-15,108;CL:0000049,1.31e-15,108;CL:0000115,4.58e-13,36;CL:0002031,5.77e-12,120;CL:0000738,1.54e-11,136;CL:0002087,1.21e-09,115;CL:0002139,1.98e-09,24;CL:0002078,1.52e-08,45;CL:0002032,2.34e-08,161;CL:0000837,2.34e-08,161;CL:0000037,5.95e-08,168;CL:0000988,6.06e-08,177;CL:0000235,3.17e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;5.56e-12;42 | |ontology_enrichment_development_v019=CL:0002057;5.56e-12;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.69e-23!112;UBERON:0002390!9.56e-20!102;UBERON:0003061!9.56e-20!102;UBERON:0002405!9.11e-19!115;UBERON:0002371!2.41e-16!80;UBERON:0001474!4.08e-14!86;UBERON:0004765!1.79e-12!101;UBERON:0001434!1.79e-12!101;UBERON:0003081!2.01e-10!216 | |ontology_enrichment_uberon=UBERON:0002193!5.69e-23!112;UBERON:0002390!9.56e-20!102;UBERON:0003061!9.56e-20!102;UBERON:0002405!9.11e-19!115;UBERON:0002371!2.41e-16!80;UBERON:0001474!4.08e-14!86;UBERON:0004765!1.79e-12!101;UBERON:0001434!1.79e-12!101;UBERON:0003081!2.01e-10!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.34e-31,108;UBERON:0002405,1.72e-28,93;UBERON:0002390,4.03e-27,98;UBERON:0003061,4.03e-27,98;UBERON:0002371,4.52e-23,76;UBERON:0001474,9.12e-21,82;UBERON:0004765,1.44e-20,90;UBERON:0003081,1.53e-18,203;UBERON:0001434,4.35e-17,100;UBERON:0000926,8.16e-10,315;UBERON:0004120,8.16e-10,315;UBERON:0006603,8.16e-10,315;UBERON:0002204,7.55e-08,167 | |||
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| ||
|short_description=p6@TNFRSF14 | |short_description=p6@TNFRSF14 | ||
}} | }} |
Latest revision as of 01:00, 17 September 2015
Short description: | p6@TNFRSF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TNFRSF14_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000482074_5end |
EntrezGene: | TNFRSF14 |
HGNC: | 11912 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 6.73e-27 | 67 |
myeloid leukocyte | 1.29e-25 | 72 |
myeloid lineage restricted progenitor cell | 1.24e-24 | 66 |
macrophage dendritic cell progenitor | 8.99e-24 | 61 |
defensive cell | 1.11e-22 | 48 |
phagocyte | 1.11e-22 | 48 |
monopoietic cell | 1.17e-22 | 59 |
monocyte | 1.17e-22 | 59 |
monoblast | 1.17e-22 | 59 |
promonocyte | 1.17e-22 | 59 |
classical monocyte | 1.53e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.53e-17 | 42 |
myeloid cell | 1.31e-15 | 108 |
common myeloid progenitor | 1.31e-15 | 108 |
endothelial cell | 4.58e-13 | 36 |
hematopoietic lineage restricted progenitor cell | 5.77e-12 | 120 |
leukocyte | 1.54e-11 | 136 |
nongranular leukocyte | 1.21e-09 | 115 |
endothelial cell of vascular tree | 1.98e-09 | 24 |
meso-epithelial cell | 1.52e-08 | 45 |
hematopoietic oligopotent progenitor cell | 2.34e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.34e-08 | 161 |
hematopoietic stem cell | 5.95e-08 | 168 |
hematopoietic cell | 6.06e-08 | 177 |
macrophage | 3.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.34e-31 | 108 |
immune system | 1.72e-28 | 93 |
hematopoietic system | 4.03e-27 | 98 |
blood island | 4.03e-27 | 98 |
bone marrow | 4.52e-23 | 76 |
bone element | 9.12e-21 | 82 |
skeletal element | 1.44e-20 | 90 |
lateral plate mesoderm | 1.53e-18 | 203 |
skeletal system | 4.35e-17 | 100 |
mesoderm | 8.16e-10 | 315 |
mesoderm-derived structure | 8.16e-10 | 315 |
presumptive mesoderm | 8.16e-10 | 315 |
musculoskeletal system | 7.55e-08 | 167 |