FFCP PHASE1:Hg19::chr13:29293144..29293155,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283537 | |EntrezGene=283537 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27501 | |HGNC=27501 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z3Q1 | |UniProt=Q7Z3Q1 | ||
|association_with_transcript=0bp_to_NM_001135919,NM_181785,uc001ush.2,uc001usj.2_5end | |association_with_transcript=0bp_to_NM_001135919,NM_181785,uc001ush.2,uc001usj.2_5end | ||
|cluster_id=chr13:29293144..29293155,- | |||
|description=CAGE_peak_4_at_SLC46A3_5end | |description=CAGE_peak_4_at_SLC46A3_5end | ||
|id=chr13:29293144..29293155,- | |id=chr13:29293144..29293155,- | ||
|ontology_enrichment_celltype=CL:0000037!2.12e-17!172;CL:0000566!2.12e-17!172;CL:0000542!2.77e-17!53;CL:0000051!2.77e-17!53;CL:0000738!3.34e-17!140;CL:0000838!6.91e-17!52;CL:0000988!5.52e-15!182;CL:0002087!5.64e-15!119;CL:0002032!1.08e-14!165;CL:0000837!1.08e-14!165;CL:0002031!4.89e-14!124;CL:0000791!3.73e-13!18;CL:0000789!3.73e-13!18;CL:0002420!3.73e-13!18;CL:0002419!3.73e-13!18;CL:0000790!3.73e-13!18;CL:0000084!1.96e-10!25;CL:0000827!1.96e-10!25;CL:0000625!4.35e-10!11;CL:0000945!1.55e-07!24;CL:0000826!1.55e-07!24 | |ontology_enrichment_celltype=CL:0000037!2.12e-17!172;CL:0000566!2.12e-17!172;CL:0000542!2.77e-17!53;CL:0000051!2.77e-17!53;CL:0000738!3.34e-17!140;CL:0000838!6.91e-17!52;CL:0000988!5.52e-15!182;CL:0002087!5.64e-15!119;CL:0002032!1.08e-14!165;CL:0000837!1.08e-14!165;CL:0002031!4.89e-14!124;CL:0000791!3.73e-13!18;CL:0000789!3.73e-13!18;CL:0002420!3.73e-13!18;CL:0002419!3.73e-13!18;CL:0000790!3.73e-13!18;CL:0000084!1.96e-10!25;CL:0000827!1.96e-10!25;CL:0000625!4.35e-10!11;CL:0000945!1.55e-07!24;CL:0000826!1.55e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000625;6.98e-15;11!CL:0000451;1.44e-09;10!CL:0000784;1.49e-09;3!CL:0000791;5.19e-09;18!CL:0000789;5.19e-09;18!CL:0002419;5.19e-09;18!CL:0000236;3.06e-08;13!CL:0002032;8.77e-08;1!CL:0000557;8.77e-08;1!CL:0000542;7.44e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.49e-15,11;CL:0000784,7.15e-10,3;CL:0000451,7.47e-10,10;CL:0000791,4.51e-09,18;CL:0000789,4.51e-09,18;CL:0002420,4.51e-09,18;CL:0002419,4.51e-09,18;CL:0000790,4.51e-09,18;CL:0000838,7.41e-09,52;CL:0000542,1.16e-08,53;CL:0000051,1.16e-08,53;CL:0000236,1.03e-07,14;CL:0000037,9.86e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;5.19e-09;18!CL:0000051;7.44e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.51e-14!115 | |ontology_enrichment_uberon=UBERON:0007023!5.51e-14!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.53e-14;2!UBERON:0005058;2.53e-14;2!UBERON:0009113;2.53e-14;2!UBERON:0000029;8.77e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.33e-08,1;UBERON:0002370,1.15e-07,4;UBERON:0005058,1.15e-07,4;UBERON:0009113,1.15e-07,4;UBERON:0003295,1.15e-07,4;UBERON:0005562,1.15e-07,4 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0.383829398097213,0,0,0,0,0.697204805222715,0.426507697462265,0,0.553995408531877,0.200544447470142,0.434021741431704,0.895661896959697,0.32389366601898,0.257575567634187,0,0.377875943688809,0,0.464858073811369,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0.211255286311942,0,0,0.336985893439485,0.150176892841506,0,0.285012743741249,0,0,1.75996244461323,0.546138611262131,0,0,2.00197993518006,0.574752439954483,1.32208974556972,0,1.1384259382189,0.587237189370939,0.382273228125229,2.64342657158052,0,0.263384084775077,0.786839080455332,0.393010762749165,0.411202997999018,1.00311897234407,0,0,0,0.334231370655521,0.294605907474837,1.32920336750173,0.541607727530031,0.25618263945135,0.910415432919148,0.986627427622057,1.10540007114339,0.289803085735052,0.741432815810302,0.802622484269139,0,1.13309342697566,0.383220493601921,1.37450978193052,1.26509846009751,0.318565414324097,1.30216690771284,2.85135613334512,0.301150238155546,0.639933055772092,1.24930726552346,2.13099526839615,1.64225599384209,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,1.29818957461873,1.74129737299267,0.398873881556595,0.953962497221368,1.71598473234038,1.48583000531826,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0.492434012174795,0,0.445893486866185,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.264145302039678,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,1.00451418286425,0,0,0,0,0,0,0,0.560425719967636,0,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0.325378394664303,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,1.08890984861323,0.188287601553558,0,0,0,0,0,0,0.569647187174163,1.19115887728894,1.23408681925858,0,1.08006287447623,0.79312517629427,0,0,0,0.185803175125719,0.28853842595289,0.569134746787313,0.478278818186467,0,0.191505370132367,0,0,1.68478306868075,0.456469358066384,0.156679895773023,0,0.169291777801603,0.1605880751037,0,0.425846237690326,0.343505344755765,0,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0.828851746593443,0,0.20453736500431,0.123084805461069,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0.437299999980979,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0.591095237907095,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0.265372693510018,0,0,0,0,0.337005664903385,0,0.702793337176017,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0,0,1.27746588066972,0,0,0,0.229160424011684,0,0,0.429226048136571,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.303747783290123,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0.732761168390412,0,0.258565912723101,0,0,0,0.320362237703084,0,0,1.48849806543585,0,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.18628920882415,0.276697269872462,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0.558644917973244,0,1.02520268501629,0,0,0.3062454773532,0.513833800771676,0,0.159633859057151,0.205116364240755,0,0.484100767249525,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0.405225507710368,0,0,0.126831620387814,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0.455324382702595,0.0887023701626388,0.460935950223117,0,0.135939465953663,0,0,0,0.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|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0.383829398097213,0,0,0,0,0.697204805222715,0.426507697462265,0,0.553995408531877,0.200544447470142,0.434021741431704,0.895661896959697,0.32389366601898,0.257575567634187,0,0.377875943688809,0,0.464858073811369,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0.211255286311942,0,0,0.336985893439485,0.150176892841506,0,0.285012743741249,0,0,1.75996244461323,0.546138611262131,0,0,2.00197993518006,0.574752439954483,1.32208974556972,0,1.1384259382189,0.587237189370939,0.382273228125229,2.64342657158052,0,0.263384084775077,0.786839080455332,0.393010762749165,0.411202997999018,1.00311897234407,0,0,0,0.334231370655521,0.294605907474837,1.32920336750173,0.541607727530031,0.25618263945135,0.910415432919148,0.986627427622057,1.10540007114339,0.289803085735052,0.741432815810302,0.802622484269139,0,1.13309342697566,0.383220493601921,1.37450978193052,1.26509846009751,0.318565414324097,1.30216690771284,2.85135613334512,0.301150238155546,0.639933055772092,1.24930726552346,2.13099526839615,1.64225599384209,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,1.29818957461873,1.74129737299267,0.398873881556595,0.953962497221368,1.71598473234038,1.48583000531826,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0.492434012174795,0,0.445893486866185,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.264145302039678,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,1.00451418286425,0,0,0,0,0,0,0,0.560425719967636,0,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0.325378394664303,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,1.08890984861323,0.188287601553558,0,0,0,0,0,0,0.569647187174163,1.19115887728894,1.23408681925858,0,1.08006287447623,0.79312517629427,0,0,0,0.185803175125719,0.28853842595289,0.569134746787313,0.478278818186467,0,0.191505370132367,0,0,1.68478306868075,0.456469358066384,0.156679895773023,0,0.169291777801603,0.1605880751037,0,0.425846237690326,0.343505344755765,0,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0.828851746593443,0,0.20453736500431,0.123084805461069,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0.437299999980979,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0.591095237907095,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0.265372693510018,0,0,0,0,0.337005664903385,0,0.702793337176017,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0,0,1.27746588066972,0,0,0,0.229160424011684,0,0,0.429226048136571,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.303747783290123,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0.732761168390412,0,0.258565912723101,0,0,0,0.320362237703084,0,0,1.48849806543585,0,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.18628920882415,0.276697269872462,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0.558644917973244,0,1.02520268501629,0,0,0.3062454773532,0.513833800771676,0,0.159633859057151,0.205116364240755,0,0.484100767249525,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0.405225507710368,0,0,0.126831620387814,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0.455324382702595,0.0887023701626388,0.460935950223117,0,0.135939465953663,0,0,0,0.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| ||
|short_description=p4@SLC46A3 | |short_description=p4@SLC46A3 | ||
}} | }} |
Latest revision as of 00:59, 17 September 2015
Short description: | p4@SLC46A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC46A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001135919, NM_181785, uc001ush.2, uc001usj.2_5end |
EntrezGene: | SLC46A3 |
HGNC: | 27501 |
UniProt: | Q7Z3Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 5.49e-15 | 11 |
plasmacytoid dendritic cell | 7.15e-10 | 3 |
dendritic cell | 7.47e-10 | 10 |
mature alpha-beta T cell | 4.51e-09 | 18 |
alpha-beta T cell | 4.51e-09 | 18 |
immature T cell | 4.51e-09 | 18 |
mature T cell | 4.51e-09 | 18 |
immature alpha-beta T cell | 4.51e-09 | 18 |
lymphoid lineage restricted progenitor cell | 7.41e-09 | 52 |
lymphocyte | 1.16e-08 | 53 |
common lymphoid progenitor | 1.16e-08 | 53 |
B cell | 1.03e-07 | 14 |
hematopoietic stem cell | 9.86e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
lymph node | 5.33e-08 | 1 |
thymus | 1.15e-07 | 4 |
hemolymphoid system gland | 1.15e-07 | 4 |
thymic region | 1.15e-07 | 4 |
pharyngeal gland | 1.15e-07 | 4 |
thymus primordium | 1.15e-07 | 4 |