FFCP PHASE1:Hg19::chr1:2487548..2487559,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8764 | |EntrezGene=8764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11912 | |HGNC=11912 | ||
|TSSclassifier=strong | |||
|UniProt=B9A034 | |UniProt=B9A034 | ||
|association_with_transcript=-101bp_to_ENST00000409119_5end | |association_with_transcript=-101bp_to_ENST00000409119_5end | ||
|cluster_id=chr1:2487548..2487559,+ | |||
|coexpression_cluster_id=C806 | |||
|description=CAGE_peak_11_at_TNFRSF14_5end | |description=CAGE_peak_11_at_TNFRSF14_5end | ||
|id=chr1:2487548..2487559,+ | |id=chr1:2487548..2487559,+ | ||
|ontology_enrichment_celltype=CL:0000766!5.67e-50!76;CL:0000738!7.87e-46!140;CL:0000839!1.89e-45!70;CL:0000557!1.65e-44!71;CL:0002194!1.84e-44!63;CL:0000576!1.84e-44!63;CL:0000040!1.84e-44!63;CL:0000559!1.84e-44!63;CL:0002009!1.77e-42!65;CL:0002087!2.44e-41!119;CL:0002057!2.53e-40!42;CL:0002031!3.71e-40!124;CL:0000860!1.45e-36!45;CL:0000988!2.08e-36!182;CL:0000037!1.08e-35!172;CL:0000566!1.08e-35!172;CL:0002032!7.32e-34!165;CL:0000837!7.32e-34!165;CL:0000763!4.92e-31!112;CL:0000049!4.92e-31!112;CL:0000219!1.73e-10!390;CL:0000134!7.61e-10!358;CL:0002393!1.11e-09!9;CL:0002397!1.11e-09!9;CL:0002320!1.38e-09!365 | |ontology_enrichment_celltype=CL:0000766!5.67e-50!76;CL:0000738!7.87e-46!140;CL:0000839!1.89e-45!70;CL:0000557!1.65e-44!71;CL:0002194!1.84e-44!63;CL:0000576!1.84e-44!63;CL:0000040!1.84e-44!63;CL:0000559!1.84e-44!63;CL:0002009!1.77e-42!65;CL:0002087!2.44e-41!119;CL:0002057!2.53e-40!42;CL:0002031!3.71e-40!124;CL:0000860!1.45e-36!45;CL:0000988!2.08e-36!182;CL:0000037!1.08e-35!172;CL:0000566!1.08e-35!172;CL:0002032!7.32e-34!165;CL:0000837!7.32e-34!165;CL:0000763!4.92e-31!112;CL:0000049!4.92e-31!112;CL:0000219!1.73e-10!390;CL:0000134!7.61e-10!358;CL:0002393!1.11e-09!9;CL:0002397!1.11e-09!9;CL:0002320!1.38e-09!365 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.61e-56;39!CL:0000234;2.61e-56;39!CL:0000860;4.51e-56;33!CL:0002057;4.51e-56;33!CL:0000576;1.28e-39;48!CL:0000766;1.44e-34;69!CL:0000148;6.00e-18;10!CL:0000235;3.00e-14;6!CL:0000763;4.40e-13;100!CL:0000147;1.69e-12;14!CL:0002567;2.49e-12;3!CL:0000738;1.18e-11;136!CL:0002619;6.28e-11;3!CL:0002087;1.87e-10;104!CL:0000710;2.06e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.17e-80,59;CL:0000576,1.17e-80,59;CL:0000040,1.17e-80,59;CL:0000559,1.17e-80,59;CL:0000766,8.41e-80,72;CL:0002009,9.57e-78,61;CL:0000839,4.54e-75,66;CL:0000557,8.03e-74,67;CL:0000473,1.69e-72,48;CL:0000234,1.69e-72,48;CL:0000860,1.52e-59,42;CL:0002057,1.52e-59,42;CL:0000763,4.57e-50,108;CL:0000049,4.57e-50,108;CL:0000738,8.53e-40,136;CL:0002031,2.37e-39,120;CL:0002087,2.93e-39,115;CL:0002032,4.70e-32,161;CL:0000837,4.70e-32,161;CL:0000037,2.69e-30,168;CL:0000988,8.36e-30,177;CL:0000148,5.79e-18,10;CL:0000541,5.79e-18,10;CL:0000235,2.33e-14,6;CL:0000219,7.57e-13,386;CL:0000147,1.65e-12,14;CL:0002567,2.50e-12,3;CL:0002619,5.10e-11,3;CL:0000134,4.33e-09,354;CL:0002320,1.01e-08,361;CL:0000710,2.02e-08,20 | |||
|ontology_enrichment_development_v019=CL:0002057;2.75e-45;42!CL:0000049;1.13e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;3.84e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.57e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.96e-43!112;UBERON:0002390!2.06e-42!102;UBERON:0003061!2.06e-42!102;UBERON:0002371!2.99e-40!80;UBERON:0001474!7.27e-40!86;UBERON:0002405!3.02e-35!115;UBERON:0004765!1.23e-30!101;UBERON:0001434!1.23e-30!101;UBERON:0002204!5.30e-13!167;UBERON:0003081!2.61e-12!216;UBERON:0002384!1.29e-08!375 | |ontology_enrichment_uberon=UBERON:0002193!3.96e-43!112;UBERON:0002390!2.06e-42!102;UBERON:0003061!2.06e-42!102;UBERON:0002371!2.99e-40!80;UBERON:0001474!7.27e-40!86;UBERON:0002405!3.02e-35!115;UBERON:0004765!1.23e-30!101;UBERON:0001434!1.23e-30!101;UBERON:0002204!5.30e-13!167;UBERON:0003081!2.61e-12!216;UBERON:0002384!1.29e-08!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.75e-64,76;UBERON:0001474,1.03e-58,82;UBERON:0004765,1.09e-52,90;UBERON:0002405,1.07e-50,93;UBERON:0002390,2.97e-50,98;UBERON:0003061,2.97e-50,98;UBERON:0001434,1.66e-46,100;UBERON:0002193,9.87e-45,108;UBERON:0002204,4.44e-24,167;UBERON:0003081,1.51e-20,203;UBERON:0000926,8.31e-10,315;UBERON:0004120,8.31e-10,315;UBERON:0006603,8.31e-10,315;UBERON:0002384,3.17e-08,371 | |||
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|short_description=p11@TNFRSF14 | |short_description=p11@TNFRSF14 | ||
}} | }} |
Latest revision as of 00:55, 17 September 2015
Short description: | p11@TNFRSF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TNFRSF14_5end |
Coexpression cluster: | C806_Melanocyte_CD14_Monocytederived_Macrophage_granulocyte_Mast_Eosinophils |
Association with transcript: | -101bp_to_ENST00000409119_5end |
EntrezGene: | TNFRSF14 |
HGNC: | 11912 |
UniProt: | B9A034 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.75e-64 | 76 |
bone element | 1.03e-58 | 82 |
skeletal element | 1.09e-52 | 90 |
immune system | 1.07e-50 | 93 |
hematopoietic system | 2.97e-50 | 98 |
blood island | 2.97e-50 | 98 |
skeletal system | 1.66e-46 | 100 |
hemolymphoid system | 9.87e-45 | 108 |
musculoskeletal system | 4.44e-24 | 167 |
lateral plate mesoderm | 1.51e-20 | 203 |
mesoderm | 8.31e-10 | 315 |
mesoderm-derived structure | 8.31e-10 | 315 |
presumptive mesoderm | 8.31e-10 | 315 |
connective tissue | 3.17e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.57e-08 | 2 |