FFCP PHASE1:Hg19::chr17:67057203..67057228,-: Difference between revisions
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|id=chr17:67057203..67057228,-
|short_description=p4@ABCA9
|description=CAGE_peak_4_at_ABCA9_5end
|association_with_transcript=-67bp_to_ENST00000340001,ENST00000370...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10350 | |EntrezGene=10350 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=39 | |HGNC=39 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IUA7,F8W6V5 | |UniProt=Q8IUA7,F8W6V5 | ||
|association_with_transcript=-67bp_to_ENST00000340001,ENST00000370732,ENST00000453749,NM_080283,uc002jhu.2,uc002jhv.2_5end | |||
|cluster_id=chr17:67057203..67057228,- | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_4_at_ABCA9_5end | |||
|id=chr17:67057203..67057228,- | |||
|ontology_enrichment_celltype=CL:0002595!1.43e-10!5;CL:1000306!1.60e-07!4;CL:0002547!1.60e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.81e-40;1!CL:0002625;1.81e-40;1!CL:0000216;1.81e-40;1!CL:1000306;2.53e-11;4!CL:0002547;2.53e-11;4!CL:0000154;6.55e-08;6!CL:0002548;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.48e-40,1;CL:0002625,1.48e-40,1;CL:0000216,1.48e-40,1;CL:1000306,2.53e-11,4;CL:0002547,2.53e-11,4;CL:0000154,6.34e-08,6;CL:0002548,6.78e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.51e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!5.19e-20!84;UBERON:0003914!6.18e-17!118;UBERON:0004573!2.41e-15!33;UBERON:0004571!2.41e-15!33;UBERON:0001637!3.42e-15!42;UBERON:0003509!3.42e-15!42;UBERON:0004572!3.42e-15!42;UBERON:0004535!9.97e-15!110;UBERON:0001009!3.84e-14!113;UBERON:0001981!1.07e-13!60;UBERON:0007500!1.07e-13!60;UBERON:0004537!1.07e-13!60;UBERON:0006965!1.07e-13!60;UBERON:0000055!1.03e-12!69;UBERON:0000025!8.26e-12!194;UBERON:0002049!1.07e-11!79;UBERON:0007798!1.07e-11!79;UBERON:0000948!2.99e-11!24;UBERON:0005498!2.99e-11!24;UBERON:0004140!2.99e-11!24;UBERON:0009881!2.99e-11!24;UBERON:0004141!2.99e-11!24;UBERON:0003084!2.99e-11!24;UBERON:0007005!2.99e-11!24;UBERON:0004139!2.99e-11!24;UBERON:0004291!2.99e-11!24;UBERON:0003834!1.43e-10!5;UBERON:0001533!1.43e-10!5;UBERON:0004111!4.95e-10!241;UBERON:0007100!9.21e-10!27;UBERON:0000477!8.24e-09!286;UBERON:0000991!2.17e-08!21;UBERON:0009196!2.17e-08!21;UBERON:0009117!2.17e-08!21;UBERON:0005564!2.17e-08!21;UBERON:0000119!2.43e-08!312;UBERON:0000992!3.62e-08!13;UBERON:0004176!6.09e-08!22;UBERON:0000483!6.83e-08!309;UBERON:0002119!1.12e-07!4;UBERON:0004531!1.12e-07!4;UBERON:0005904!1.17e-07!4;UBERON:0000415!1.60e-07!4;UBERON:0007240!1.60e-07!4;UBERON:0005742!1.60e-07!4;UBERON:0005734!1.60e-07!4;UBERON:0004664!1.60e-07!4;UBERON:0004663!1.60e-07!4;UBERON:0000490!3.48e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.81e-40;1!UBERON:0001343;1.81e-40;1!UBERON:0004910;1.81e-40;1!UBERON:0004813;1.81e-40;1!UBERON:0004909;5.15e-21;2!UBERON:0004797;2.53e-11;4!UBERON:0000415;2.53e-11;4!UBERON:0007240;2.53e-11;4!UBERON:0005742;2.53e-11;4!UBERON:0005734;2.53e-11;4!UBERON:0004664;2.53e-11;4!UBERON:0004663;2.53e-11;4!UBERON:0005904;3.26e-11;4!UBERON:0002119;3.26e-11;4!UBERON:0000947;1.34e-08;21!UBERON:0010191;1.34e-08;21!UBERON:0000991;1.48e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.48e-40,1;UBERON:0001343,1.48e-40,1;UBERON:0004910,1.48e-40,1;UBERON:0005154,1.48e-40,1;UBERON:0005295,1.48e-40,1;UBERON:0004813,1.48e-40,1;UBERON:0005297,1.48e-40,1;UBERON:0005294,1.48e-40,1;UBERON:0010141,1.48e-40,1;UBERON:0005891,1.48e-40,1;UBERON:0004909,4.66e-21,2;UBERON:0000415,2.53e-11,4;UBERON:0007240,2.53e-11,4;UBERON:0005742,2.53e-11,4;UBERON:0005734,2.53e-11,4;UBERON:0004664,2.53e-11,4;UBERON:0004663,2.53e-11,4;UBERON:0002119,2.80e-11,4;UBERON:0005904,3.10e-11,4;UBERON:0000991,1.37e-08,21;UBERON:0009196,1.37e-08,21;UBERON:0009117,1.37e-08,21;UBERON:0005564,1.37e-08,21;UBERON:0000947,1.42e-08,21;UBERON:0010191,1.42e-08,21;UBERON:0004872,2.69e-08,83;UBERON:0004176,3.04e-08,22;UBERON:0004797,5.08e-07,7 | |||
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| ||
|short_description=p4@ABCA9 | |||
}} | }} |
Latest revision as of 00:55, 17 September 2015
Short description: | p4@ABCA9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ABCA9_5end |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | -67bp_to_ENST00000340001, ENST00000370732, ENST00000453749, NM_080283, uc002jhu.2, uc002jhv.2_5end |
EntrezGene: | ABCA9 |
HGNC: | 39 |
UniProt: | Q8IUA7F8W6V5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.48e-40 | 1 |
seminiferous tubule epithelial cell | 1.48e-40 | 1 |
Sertoli cell | 1.48e-40 | 1 |
fibroblast of tunica adventitia of artery | 2.53e-11 | 4 |
fibroblast of the aortic adventitia | 2.53e-11 | 4 |
protein secreting cell | 6.34e-08 | 6 |
cardiac fibroblast | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.48e-40 | 1 |
seminiferous tubule of testis | 1.48e-40 | 1 |
epithelium of male gonad | 1.48e-40 | 1 |
epithelial cord | 1.48e-40 | 1 |
sex cord | 1.48e-40 | 1 |
seminiferous tubule epithelium | 1.48e-40 | 1 |
testis sex cord | 1.48e-40 | 1 |
genital ridge | 1.48e-40 | 1 |
primitive sex cord of indifferent gonad | 1.48e-40 | 1 |
coelomic epithelium | 1.48e-40 | 1 |
epithelium of gonad | 4.66e-21 | 2 |
artery wall | 2.53e-11 | 4 |
tunica adventitia of artery | 2.53e-11 | 4 |
adventitia | 2.53e-11 | 4 |
tunica adventitia of blood vessel | 2.53e-11 | 4 |
aorta tunica adventitia | 2.53e-11 | 4 |
aorta wall | 2.53e-11 | 4 |
left ovary | 2.80e-11 | 4 |
duct of male reproductive system | 3.10e-11 | 4 |
gonad | 1.37e-08 | 21 |
indifferent external genitalia | 1.37e-08 | 21 |
indifferent gonad | 1.37e-08 | 21 |
gonad primordium | 1.37e-08 | 21 |
aorta | 1.42e-08 | 21 |
aortic system | 1.42e-08 | 21 |
splanchnic layer of lateral plate mesoderm | 2.69e-08 | 83 |
external genitalia | 3.04e-08 | 22 |
blood vessel layer | 5.08e-07 | 7 |