FFCP PHASE1:Hg19::chr2:134326063..134326088,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=344148 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29847 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_ENST00000409213_5end | |||
|cluster_id=chr2:134326063..134326088,- | |||
|description=CAGE_peak_2_at_NCKAP5_5end | |||
|id=chr2:134326063..134326088,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000306;1.69e-07;4!CL:0002547;1.69e-07;4!CL:0002593;7.98e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,3.17e-07,4;CL:0002547,3.17e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.83e-13;14!DOID:193;3.85e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.70e-13,14;DOID:193,2.84e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.01e-21!115;UBERON:0004111!2.80e-15!241;UBERON:0000477!1.37e-14!286;UBERON:0000025!9.06e-14!194;UBERON:0001049!1.90e-12!57;UBERON:0005068!1.90e-12!57;UBERON:0006241!1.90e-12!57;UBERON:0007135!1.90e-12!57;UBERON:0000073!4.68e-12!94;UBERON:0001016!4.68e-12!94;UBERON:0002346!3.19e-11!90;UBERON:0000483!7.69e-11!309;UBERON:0000119!9.09e-11!312;UBERON:0005743!9.16e-11!86;UBERON:0001017!1.76e-10!82;UBERON:0000955!3.13e-10!69;UBERON:0006238!3.13e-10!69;UBERON:0003075!3.23e-10!86;UBERON:0007284!3.23e-10!86;UBERON:0000468!8.49e-10!659;UBERON:0002616!1.22e-09!59;UBERON:0003080!7.78e-09!42;UBERON:0000475!8.44e-09!365;UBERON:0002780!2.44e-08!41;UBERON:0001890!2.44e-08!41;UBERON:0006240!2.44e-08!41;UBERON:0000481!5.64e-08!347;UBERON:0000153!5.77e-08!129;UBERON:0007811!5.77e-08!129;UBERON:0000467!8.33e-08!625;UBERON:0000480!1.04e-07!626;UBERON:0004872!1.56e-07!84;UBERON:0000033!4.02e-07!123;UBERON:0000924!6.01e-07!173;UBERON:0006601!6.01e-07!173;UBERON:0003056!6.96e-07!61;UBERON:0000055!8.05e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;1.60e-10;5!UBERON:0000992;2.89e-08;13!UBERON:0001905;5.27e-08;2!UBERON:0002757;5.27e-08;2!UBERON:0010134;5.27e-08;2!UBERON:0005408;5.27e-08;2!UBERON:0001899;5.27e-08;2!UBERON:0004797;1.69e-07;4!UBERON:0000415;1.69e-07;4!UBERON:0007240;1.69e-07;4!UBERON:0005742;1.69e-07;4!UBERON:0005734;1.69e-07;4!UBERON:0004664;1.69e-07;4!UBERON:0004663;1.69e-07;4!UBERON:0004573;2.30e-07;33!UBERON:0004571;2.30e-07;33!UBERON:0002456;7.98e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,1.22e-10,5;UBERON:0004797,2.81e-10,7;UBERON:0000992,1.99e-08,13;UBERON:0001905,5.31e-08,2;UBERON:0002757,5.31e-08,2;UBERON:0010134,5.31e-08,2;UBERON:0005408,5.31e-08,2;UBERON:0001899,5.31e-08,2;UBERON:0001637,9.85e-08,42;UBERON:0003509,9.85e-08,42;UBERON:0004572,9.85e-08,42;UBERON:0004872,3.02e-07,83;UBERON:0000415,3.17e-07,4;UBERON:0007240,3.17e-07,4;UBERON:0005742,3.17e-07,4;UBERON:0005734,3.17e-07,4;UBERON:0004664,3.17e-07,4;UBERON:0004663,3.17e-07,4;UBERON:0004573,3.52e-07,33;UBERON:0004571,3.52e-07,33;UBERON:0007500,9.73e-07,59;UBERON:0001981,9.73e-07,59;UBERON:0004537,9.73e-07,59;UBERON:0006965,9.73e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0.672325146451775,1.20538905604795,2.19093027116212,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0.886917589850256,0.527008714158756,0.327447688744282,0,0,0,0,0,0,0,0,0.79504962946682,1.72046919021225,0.694281003215189,0,0,0,0.208994966536811,0,1.06729878806013,0.33472061276467,0.805658634218294,0.760272105718513,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,0,0,0,1.49091585508596,0,3.04541115870403,1.14734648299525,1.06400514659507,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0.300091096084402,0.412210116953756,0.515281080091258,0.37223371266318,0,0,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0,0,0,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.352226082707465,0.288732895522148,0.462985512576611,0.380508304469197,1.58040879591855,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,2.32689088364,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0,0,0,0.532685175939381,0.0821271560138091,0.519254429183621,0.348631135379878,0,0.200506470303285,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.316654886678627,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0.512900250232778,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.773365746336976,0,0,0,0,0,0.0852266274161009,0.267096106940212,0.165284915360978,0,0.255225424989168,0,0,1.88887408098384,0,0.924100740528266,0,0,0,0,0,0,0.190630193923825,0,0.855877976067841,0.318203247925937,0.78494864019923,0,0.274537029736055,0.117812402345686,0,0,2.52755073743389,0,1.46228093778771,1.05650146756755,0.682499557039929,0.282810863907425,0,0,0.66343897524122,0,0,0,1.42037263873893,0.6196469961995,0.563391205064483,0,0,1.78335525740625,0.354761064070598,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0.333926115068718,0,11.6118974470396,0.19924798825107,0.552567831062295,0.251932747854276,0.715880777515084,0,0.933118762985422,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.663475559587348,0,0.87754158861589,0,0.557694977114413,0.692552326534174,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.876214728748802,1.60515529459758,0.468528891450678,0,0,0,0,2.41981432097328,0,0.505492637027904,0,0,0,0,0,0,0,0.554698692052555,0,0,0,1.04836000945218,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0,0.189932387867636,0,0,0,0,0.144090417154106,0,0,0,1.11827282008889,0,0,0,0.101998217636322,0,0.600420288709789,0.410716136675979,0,3.86788897277961,0,1.11712960508902,1.3749625440701,0,0.798716001995964,2.57535628881943,0.223171457441873,1.5452198671947,4.68389848605125,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0,0,0,0,0.945668487590378,0.524545881349981,0.422401346077626,0.179287339332845,0,1.42939065274673,0,0,1.08599920350743,0,0.653174720218818,0,0,0.340776043570843,0,0.146552233678082,1.32506888912221,0.517131825446202,0.79339561045614,0,0,0.106787412567695,3.14408610199332,0.414239055347196,0,0,0,0,1.08803560673895,0.2506898940227,0.306345576763462,0,0,0.886068179966986,0.122026264901963,0.625954653532499,0.573409195690071,0.110929051536852,0.124192805882767,1.24513771442608,0.499921631848426,0,0,0.470531639396343,0,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0.453692771289717,1.08806040407946,0.73927574994817,1.75226443880073,0,0.310525913752519,4.97647449409027,1.32920857278997,1.5652351854352,0,0,2.03435366602331,2.00033525122815,0,3.24823631914946,1.99047944349308,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.829550616910385,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,1.57265941855896,0,0.33946505990805,0,37.3046650419597,0,1.90802610392051,54.4146040508648,0,0,0,0.642292250964595,0,0.478901577171454,0.205116364240755,0,0,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0.818859587550484,0,0.337687923091973,0,0.206686796501184,0.19024743058172,0,0.548257766857182,0.496211178389294,0.527613733078862,0,24.6422844504012,25.5575628886306,0,0,0.0887023701626388,0,0,0.611727596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| |||
|short_description=p2@NCKAP5 | |||
}} |
Latest revision as of 00:53, 17 September 2015
Short description: | p2@NCKAP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NCKAP5_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000409213_5end |
EntrezGene: | NCKAP5 |
HGNC: | 29847 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 3.17e-07 | 4 |
fibroblast of the aortic adventitia | 3.17e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
right ovary | 1.22e-10 | 5 |
blood vessel layer | 2.81e-10 | 7 |
female gonad | 1.99e-08 | 13 |
pineal body | 5.31e-08 | 2 |
regional part of epithalamus | 5.31e-08 | 2 |
secretory circumventricular organ | 5.31e-08 | 2 |
circumventricular organ | 5.31e-08 | 2 |
epithalamus | 5.31e-08 | 2 |
artery | 9.85e-08 | 42 |
arterial blood vessel | 9.85e-08 | 42 |
arterial system | 9.85e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 3.02e-07 | 83 |
artery wall | 3.17e-07 | 4 |
tunica adventitia of artery | 3.17e-07 | 4 |
adventitia | 3.17e-07 | 4 |
tunica adventitia of blood vessel | 3.17e-07 | 4 |
aorta tunica adventitia | 3.17e-07 | 4 |
aorta wall | 3.17e-07 | 4 |
systemic artery | 3.52e-07 | 33 |
systemic arterial system | 3.52e-07 | 33 |
epithelial tube open at both ends | 9.73e-07 | 59 |
blood vessel | 9.73e-07 | 59 |
blood vasculature | 9.73e-07 | 59 |
vascular cord | 9.73e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.70e-13 | 14 |
reproductive organ cancer | 2.84e-07 | 29 |