FFCP PHASE1:Hg19::chr17:6676791..6676834,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54739 | |EntrezGene=54739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=30932 | |HGNC=30932 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-152bp_to_AK091799_5end | |association_with_transcript=-152bp_to_AK091799_5end | ||
|cluster_id=chr17:6676791..6676834,+ | |||
|description=CAGE_peak_7_at_XAF1_5end | |description=CAGE_peak_7_at_XAF1_5end | ||
|id=chr17:6676791..6676834,+ | |id=chr17:6676791..6676834,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.38e-17!42;CL:0000860!9.92e-16!45;CL:0002087!4.66e-15!119;CL:0002031!2.04e-14!124;CL:0002194!9.18e-14!63;CL:0000576!9.18e-14!63;CL:0000040!9.18e-14!63;CL:0000559!9.18e-14!63;CL:0000839!1.03e-13!70;CL:0000766!1.41e-13!76;CL:0000738!1.72e-13!140;CL:0000557!2.36e-13!71;CL:0002009!5.32e-13!65;CL:0002032!6.37e-12!165;CL:0000837!6.37e-12!165;CL:0000037!9.26e-12!172;CL:0000566!9.26e-12!172;CL:0000988!1.18e-10!182;CL:0000763!1.27e-09!112;CL:0000049!1.27e-09!112 | |ontology_enrichment_celltype=CL:0002057!1.38e-17!42;CL:0000860!9.92e-16!45;CL:0002087!4.66e-15!119;CL:0002031!2.04e-14!124;CL:0002194!9.18e-14!63;CL:0000576!9.18e-14!63;CL:0000040!9.18e-14!63;CL:0000559!9.18e-14!63;CL:0000839!1.03e-13!70;CL:0000766!1.41e-13!76;CL:0000738!1.72e-13!140;CL:0000557!2.36e-13!71;CL:0002009!5.32e-13!65;CL:0002032!6.37e-12!165;CL:0000837!6.37e-12!165;CL:0000037!9.26e-12!172;CL:0000566!9.26e-12!172;CL:0000988!1.18e-10!182;CL:0000763!1.27e-09!112;CL:0000049!1.27e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.25e-15;33!CL:0002057;3.25e-15;33!CL:0000473;5.00e-14;39!CL:0000234;5.00e-14;39!CL:0000576;1.56e-09;48!CL:1000415;2.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.26e-15,48;CL:0000234,9.26e-15,48;CL:0000860,4.27e-13,42;CL:0002057,4.27e-13,42;CL:0000766,6.03e-12,72;CL:0002194,1.22e-11,59;CL:0000576,1.22e-11,59;CL:0000040,1.22e-11,59;CL:0000559,1.22e-11,59;CL:0002009,3.08e-11,61;CL:0000839,2.46e-10,66;CL:0000557,3.59e-10,67;CL:0000763,1.23e-07,108;CL:0000049,1.23e-07,108;CL:1000415,2.15e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;6.05e-13;1!CL:0002057;4.49e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.77e-12!80;UBERON:0002390!1.59e-11!102;UBERON:0003061!1.59e-11!102;UBERON:0001474!3.17e-11!86;UBERON:0002193!2.49e-09!112;UBERON:0004765!4.02e-09!101;UBERON:0001434!4.02e-09!101;UBERON:0002405!3.16e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;6.05e-13;1!UBERON:0002146;6.05e-13;1!UBERON:0002171;6.05e-13;1!UBERON:0008811;6.05e-13;1!UBERON:0005623;6.05e-13;1!UBERON:0006518;6.05e-13;1!UBERON:0008949;6.05e-13;1!UBERON:0000101;6.05e-13;1!UBERON:0002167;6.05e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,3.33e-13,1;UBERON:0008811,3.33e-13,1;UBERON:0006258,3.33e-13,1;UBERON:0005876,3.33e-13,1;UBERON:0004874,3.33e-13,1;UBERON:0002171,5.38e-13,1;UBERON:0006518,5.38e-13,1;UBERON:0008949,5.38e-13,1;UBERON:0000101,5.38e-13,1;UBERON:0002167,5.38e-13,1;UBERON:0002146,6.06e-13,1;UBERON:0005623,6.06e-13,1;UBERON:0002371,7.02e-09,76;UBERON:0001474,3.57e-08,82;UBERON:0004765,2.24e-07,90;UBERON:0002405,4.11e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0,0.157421562627358,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0.553995408531877,0.401088894940283,0.217010870715852,0.223915474239924,0,0.257575567634187,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0.619412741790207,1.43846196161075,0.512321413058201,0.709446689665756,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,1.79517291859469,0.852449501065388,5.5139755339431,1.13477044938228,0.622822248995575,1.7587406567972,3.12889751052121,0.65156653411535,1.81619850790011,0.736555271975129,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.32145117339416,0,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.822405995998037,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0.25618263945135,0.130059347559878,0.657751618414705,0.276350017785848,0,0.14828656316206,0,0,0,0.383220493601921,0,0.759059076058509,0,0,0,0,0.127986611154418,0,0,0,0,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0.385029108839245,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0.415941723061614,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.974853958525138,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.637705090915289,0,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0.281338832821026,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0.171986032471617,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0.0633107959558787,7.03984977845291,0,0.426905989478705,0.39961921916426,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.273810757783986,0,0,0,0.837847203816763,1.60412296808179,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0.146552233678082,0,0.258565912723101,0.66116300871345,0,0,0.533937062838473,0.157204305099666,1.65695622138878,0,0,0,0.638341257770182,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0.573409195690071,0.110929051536852,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0.829412415681711,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.428883182749851,0.521988583930423,0,0,4.89473409012935,0,0,0,0,0,1.01365464391844,0,0,0.911579868532147,0,0,0,0,0.327609848846413,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0.183428598521679,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0.413373593002368,0.0634158101939068,0,0,1.98484471355718,0,0.511049710558381,0,0,0,0,0.177404740325278,0.345701962667338,0,0,0,0,0,0,0.314231179832004,0,0,0.431855182437243,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0.098150233615243,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0,0.799529247399431,0,0,0.0802413666891683,0,0,0.286679166302903,0,0,0,1.0580536810308,0.743990036333503,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0,0.112131862580613,0,0.606351566874658,0,0,0,0.0717222053926763,0.332660356546013,0,0.320182037633146,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0,0.157421562627358,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0.553995408531877,0.401088894940283,0.217010870715852,0.223915474239924,0,0.257575567634187,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0.619412741790207,1.43846196161075,0.512321413058201,0.709446689665756,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,1.79517291859469,0.852449501065388,5.5139755339431,1.13477044938228,0.622822248995575,1.7587406567972,3.12889751052121,0.65156653411535,1.81619850790011,0.736555271975129,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.32145117339416,0,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.822405995998037,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0.25618263945135,0.130059347559878,0.657751618414705,0.276350017785848,0,0.14828656316206,0,0,0,0.383220493601921,0,0.759059076058509,0,0,0,0,0.127986611154418,0,0,0,0,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0.385029108839245,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0.415941723061614,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.974853958525138,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.637705090915289,0,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0.281338832821026,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0.171986032471617,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0.0633107959558787,7.03984977845291,0,0.426905989478705,0.39961921916426,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.273810757783986,0,0,0,0.837847203816763,1.60412296808179,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0.146552233678082,0,0.258565912723101,0.66116300871345,0,0,0.533937062838473,0.157204305099666,1.65695622138878,0,0,0,0.638341257770182,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0.573409195690071,0.110929051536852,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0.829412415681711,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.428883182749851,0.521988583930423,0,0,4.89473409012935,0,0,0,0,0,1.01365464391844,0,0,0.911579868532147,0,0,0,0,0.327609848846413,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0.183428598521679,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0.413373593002368,0.0634158101939068,0,0,1.98484471355718,0,0.511049710558381,0,0,0,0,0.177404740325278,0.345701962667338,0,0,0,0,0,0,0.314231179832004,0,0,0.431855182437243,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0.098150233615243,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0,0.799529247399431,0,0,0.0802413666891683,0,0,0.286679166302903,0,0,0,1.0580536810308,0.743990036333503,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0,0.112131862580613,0,0.606351566874658,0,0,0,0.0717222053926763,0.332660356546013,0,0.320182037633146,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p7@XAF1 | |short_description=p7@XAF1 | ||
}} | }} |
Latest revision as of 00:46, 17 September 2015
Short description: | p7@XAF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_XAF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -152bp_to_AK091799_5end |
EntrezGene: | XAF1 |
HGNC: | 30932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.26e-15 | 48 |
phagocyte | 9.26e-15 | 48 |
classical monocyte | 4.27e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.27e-13 | 42 |
myeloid leukocyte | 6.03e-12 | 72 |
monopoietic cell | 1.22e-11 | 59 |
monocyte | 1.22e-11 | 59 |
monoblast | 1.22e-11 | 59 |
promonocyte | 1.22e-11 | 59 |
macrophage dendritic cell progenitor | 3.08e-11 | 61 |
myeloid lineage restricted progenitor cell | 2.46e-10 | 66 |
granulocyte monocyte progenitor cell | 3.59e-10 | 67 |
myeloid cell | 1.23e-07 | 108 |
common myeloid progenitor | 1.23e-07 | 108 |
epithelial cell of gall bladder | 2.15e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
penis | 3.33e-13 | 1 |
intromittent organ | 3.33e-13 | 1 |
lateral plate mesenchyme | 3.33e-13 | 1 |
undifferentiated genital tubercle | 3.33e-13 | 1 |
somatopleure | 3.33e-13 | 1 |
lower lobe of right lung | 5.38e-13 | 1 |
right lung lobe | 5.38e-13 | 1 |
lower lobe of lung | 5.38e-13 | 1 |
lobe of lung | 5.38e-13 | 1 |
right lung | 5.38e-13 | 1 |
pulmonary valve | 6.06e-13 | 1 |
semi-lunar valve | 6.06e-13 | 1 |
bone marrow | 7.02e-09 | 76 |
bone element | 3.57e-08 | 82 |
skeletal element | 2.24e-07 | 90 |
immune system | 4.11e-07 | 93 |