FFCP PHASE1:Hg19::chr1:24829384..24829443,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11123 | |EntrezGene=11123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3042 | |HGNC=3042 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKA8,E5L4P0 | |UniProt=Q9UKA8,E5L4P0 | ||
|association_with_transcript=0bp_to_ENST00000374395,ENST00000436717,NM_001251977,NM_001251981,NM_001251983,NM_013441,uc001bjj.2_5end | |association_with_transcript=0bp_to_ENST00000374395,ENST00000436717,NM_001251977,NM_001251981,NM_001251983,NM_013441,uc001bjj.2_5end | ||
|cluster_id=chr1:24829384..24829443,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_3_at_RCAN3_5end | |description=CAGE_peak_3_at_RCAN3_5end | ||
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|ontology_enrichment_celltype=CL:0000791!4.55e-12!18;CL:0000789!4.55e-12!18;CL:0002420!4.55e-12!18;CL:0002419!4.55e-12!18;CL:0000790!4.55e-12!18;CL:0000084!6.43e-09!25;CL:0000827!6.43e-09!25;CL:0000625!2.81e-08!11;CL:0000838!1.17e-07!52;CL:0000542!1.70e-07!53;CL:0000051!1.70e-07!53 | |ontology_enrichment_celltype=CL:0000791!4.55e-12!18;CL:0000789!4.55e-12!18;CL:0002420!4.55e-12!18;CL:0002419!4.55e-12!18;CL:0000790!4.55e-12!18;CL:0000084!6.43e-09!25;CL:0000827!6.43e-09!25;CL:0000625!2.81e-08!11;CL:0000838!1.17e-07!52;CL:0000542!1.70e-07!53;CL:0000051!1.70e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.34e-12;18!CL:0000789;2.34e-12;18!CL:0002419;2.34e-12;18!CL:0000084;3.30e-09;25!CL:0000625;1.68e-08;11 | |ontology_enrichment_celltype_v019=CL:0000791;2.34e-12;18!CL:0000789;2.34e-12;18!CL:0002419;2.34e-12;18!CL:0000084;3.30e-09;25!CL:0000625;1.68e-08;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.75e-12,18;CL:0000789,2.75e-12,18;CL:0002420,2.75e-12,18;CL:0002419,2.75e-12,18;CL:0000790,2.75e-12,18;CL:0000084,3.80e-09,25;CL:0000827,3.80e-09,25;CL:0000838,1.66e-08,52;CL:0000625,2.03e-08,11;CL:0000542,2.53e-08,53;CL:0000051,2.53e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.34e-12;18 | |ontology_enrichment_development_v019=CL:0000790;2.34e-12;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@RCAN3 | |short_description=p3@RCAN3 | ||
}} | }} |
Latest revision as of 00:44, 17 September 2015
Short description: | p3@RCAN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RCAN3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000374395, ENST00000436717, NM_001251977, NM_001251981, NM_001251983, NM_013441, uc001bjj.2_5end |
EntrezGene: | RCAN3 |
HGNC: | 3042 |
UniProt: | Q9UKA8E5L4P0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.75e-12 | 18 |
alpha-beta T cell | 2.75e-12 | 18 |
immature T cell | 2.75e-12 | 18 |
mature T cell | 2.75e-12 | 18 |
immature alpha-beta T cell | 2.75e-12 | 18 |
T cell | 3.80e-09 | 25 |
pro-T cell | 3.80e-09 | 25 |
lymphoid lineage restricted progenitor cell | 1.66e-08 | 52 |
CD8-positive, alpha-beta T cell | 2.03e-08 | 11 |
lymphocyte | 2.53e-08 | 53 |
common lymphoid progenitor | 2.53e-08 | 53 |