FFCP PHASE1:Hg19::chr11:17741206..17741215,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4654 | |EntrezGene=4654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7611 | |HGNC=7611 | ||
|TSSclassifier=strong | |||
|UniProt=P15172 | |UniProt=P15172 | ||
|association_with_transcript=91bp_to_ENST00000250003_5end | |association_with_transcript=91bp_to_ENST00000250003_5end | ||
|cluster_id=chr11:17741206..17741215,+ | |||
|coexpression_cluster_id=C797 | |||
|description=CAGE_peak_6_at_MYOD1_5end | |description=CAGE_peak_6_at_MYOD1_5end | ||
|id=chr11:17741206..17741215,+ | |id=chr11:17741206..17741215,+ | ||
|ontology_enrichment_celltype=CL:0000188!3.66e-41!9;CL:0000515!1.97e-31!4;CL:0000680!6.24e-12!57;CL:0000056!6.24e-12!57;CL:0000355!6.24e-12!57;CL:0002603!3.99e-11!3;CL:0002242!2.82e-09!1;CL:0000228!2.82e-09!1;CL:0002372!2.82e-09!1;CL:0000183!2.44e-07!59 | |ontology_enrichment_celltype=CL:0000188!3.66e-41!9;CL:0000515!1.97e-31!4;CL:0000680!6.24e-12!57;CL:0000056!6.24e-12!57;CL:0000355!6.24e-12!57;CL:0002603!3.99e-11!3;CL:0002242!2.82e-09!1;CL:0000228!2.82e-09!1;CL:0002372!2.82e-09!1;CL:0000183!2.44e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000228;8.64e-26;1!CL:0002372;8.64e-26;1!CL:0000056;1.84e-25;4!CL:0000680;5.04e-15;7!CL:0002575;8.82e-14;2!CL:0000188;5.52e-12;9!CL:0000515;1.60e-09;3!CL:0000669;1.54e-07;4!CL:0002321;1.59e-07;15!CL:0000737;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.26e-25,1;CL:0002372,1.26e-25,1;CL:0000515,2.36e-25,4;CL:0002575,9.40e-14,2;CL:0000188,5.83e-12,9;CL:0000669,1.59e-07,4;CL:0000737,2.04e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.84e-25;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!2.83e-22!61;UBERON:0002036!2.83e-22!61;UBERON:0003082!2.83e-22!61;UBERON:0002385!1.73e-21!63;UBERON:0001015!1.73e-21!63;UBERON:0000383!1.73e-21!63;UBERON:0004290!4.39e-19!70;UBERON:0001630!9.26e-17!2;UBERON:0005090!9.26e-17!2;UBERON:0000486!6.43e-16!82;UBERON:0000914!1.07e-15!83;UBERON:0002329!1.07e-15!83;UBERON:0003077!1.07e-15!83;UBERON:0003059!1.07e-15!83;UBERON:0007282!1.07e-15!83;UBERON:0009618!1.07e-15!83;UBERON:0007285!1.07e-15!83;UBERON:0001723!4.42e-11!3;UBERON:0001033!4.42e-11!3;UBERON:0010056!4.42e-11!3;UBERON:0000490!8.21e-10!138;UBERON:0005256!2.26e-09!143;UBERON:0002426!2.40e-09!1;UBERON:0003831!2.40e-09!1;UBERON:0003898!2.40e-09!1;UBERON:0004830!2.40e-09!1;UBERON:0001774!2.40e-09!1;UBERON:0003830!2.40e-09!1;UBERON:0005175!2.40e-09!1;UBERON:0003897!2.40e-09!1;UBERON:0001103!2.40e-09!1;UBERON:0010084!2.40e-09!1;UBERON:0005418!3.88e-09!1;UBERON:0001389!3.88e-09!1;UBERON:0000026!3.88e-09!1;UBERON:0008784!3.88e-09!1;UBERON:0006058!3.88e-09!1;UBERON:0003663!3.88e-09!1;UBERON:0001383!3.88e-09!1;UBERON:0004256!3.88e-09!1;UBERON:0002529!3.88e-09!1;UBERON:0004708!3.88e-09!1;UBERON:0002101!3.88e-09!1;UBERON:0004709!3.88e-09!1;UBERON:0003661!3.88e-09!1;UBERON:0002471!3.88e-09!1;UBERON:0004357!3.88e-09!1;UBERON:0009872!3.88e-09!1;UBERON:0004347!3.88e-09!1;UBERON:0005420!3.88e-09!1;UBERON:0005732!3.88e-09!1;UBERON:0006057!3.88e-09!1;UBERON:0000978!3.88e-09!1;UBERON:0002103!3.88e-09!1;UBERON:0001665!3.88e-09!1;UBERON:0003823!3.88e-09!1;UBERON:0000154!3.88e-09!1;UBERON:0005733!3.88e-09!1;UBERON:0005730!3.88e-09!1;UBERON:0002204!1.30e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.22e-38;16!UBERON:0002036;1.22e-38;16!UBERON:0002426;8.64e-26;1!UBERON:0003831;8.64e-26;1!UBERON:0003898;8.64e-26;1!UBERON:0004830;8.64e-26;1!UBERON:0003830;8.64e-26;1!UBERON:0005175;8.64e-26;1!UBERON:0001774;8.64e-26;1!UBERON:0001103;8.64e-26;1!UBERON:0002385;4.22e-20;31!UBERON:0001015;4.22e-20;31!UBERON:0000383;4.22e-20;31!UBERON:0005090;1.29e-13;2!UBERON:0001630;1.29e-13;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,7.62e-26,1;UBERON:0003831,7.62e-26,1;UBERON:0003898,7.62e-26,1;UBERON:0004830,7.62e-26,1;UBERON:0003830,7.62e-26,1;UBERON:0005175,7.62e-26,1;UBERON:0001774,7.62e-26,1;UBERON:0001103,7.62e-26,1;UBERON:0010084,7.62e-26,1;UBERON:0005090,1.21e-13,2;UBERON:0001630,1.21e-13,2;UBERON:0001134,3.25e-10,62;UBERON:0002036,3.25e-10,62;UBERON:0003082,3.25e-10,62;UBERON:0002385,6.68e-10,64;UBERON:0001015,6.68e-10,64;UBERON:0000383,6.68e-10,64;UBERON:0002329,6.04e-09,71;UBERON:0003059,6.04e-09,71;UBERON:0007282,6.04e-09,71;UBERON:0004290,6.04e-09,71;UBERON:0009618,6.04e-09,71;UBERON:0003077,8.00e-09,72;UBERON:0007285,8.00e-09,72;UBERON:0007524,1.05e-08,73;UBERON:0007503,3.70e-08,78;UBERON:0000486,1.12e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.434343920002738,0.410952645100767,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,2.70678011217942,0.308097234229289,0.460511024178389,0.137836572484531,0,0,0.255679882248303,0.801288320820636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60052752859992,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869291361512897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,6.95888658802919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.434343920002738,0.410952645100767,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,2.70678011217942,0.308097234229289,0.460511024178389,0.137836572484531,0,0,0.255679882248303,0.801288320820636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60052752859992,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869291361512897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,6.95888658802919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@MYOD1 | |short_description=p6@MYOD1 | ||
}} | }} |
Latest revision as of 00:40, 17 September 2015
Short description: | p6@MYOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MYOD1_5end |
Coexpression cluster: | C797_mesenchymal_skeletal_Endothelial_Pericytes_Skeletal_Astrocyte_left |
Association with transcript: | 91bp_to_ENST00000250003_5end |
EntrezGene: | MYOD1 |
HGNC: | 7611 |
UniProt: | P15172 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.26e-25 | 1 |
myotube | 1.26e-25 | 1 |
skeletal muscle myoblast | 2.36e-25 | 4 |
central nervous system pericyte | 9.40e-14 | 2 |
cell of skeletal muscle | 5.83e-12 | 9 |
pericyte cell | 1.59e-07 | 4 |
striated muscle cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 7.62e-26 | 1 |
respiratory system muscle | 7.62e-26 | 1 |
skeletal muscle of trunk | 7.62e-26 | 1 |
respiratory system skeletal muscle | 7.62e-26 | 1 |
thoracic segment muscle | 7.62e-26 | 1 |
chest organ | 7.62e-26 | 1 |
muscle of trunk | 7.62e-26 | 1 |
diaphragm | 7.62e-26 | 1 |
future diaphragm | 7.62e-26 | 1 |
muscle structure | 1.21e-13 | 2 |
muscle organ | 1.21e-13 | 2 |
skeletal muscle tissue | 3.25e-10 | 62 |
striated muscle tissue | 3.25e-10 | 62 |
myotome | 3.25e-10 | 62 |
muscle tissue | 6.68e-10 | 64 |
musculature | 6.68e-10 | 64 |
musculature of body | 6.68e-10 | 64 |
somite | 6.04e-09 | 71 |
presomitic mesoderm | 6.04e-09 | 71 |
presumptive segmental plate | 6.04e-09 | 71 |
dermomyotome | 6.04e-09 | 71 |
trunk paraxial mesoderm | 6.04e-09 | 71 |
paraxial mesoderm | 8.00e-09 | 72 |
presumptive paraxial mesoderm | 8.00e-09 | 72 |
dense mesenchyme tissue | 1.05e-08 | 73 |
epithelial vesicle | 3.70e-08 | 78 |
multilaminar epithelium | 1.12e-07 | 83 |