FFCP PHASE1:Hg19::chr2:133427767..133427797,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:133427767..133427797,- to FFCP PHASE1:Hg19::chr2:133427767..133427797,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116372 | |EntrezGene=116372 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28431 | |HGNC=28431 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N2G4,F8WD77 | |UniProt=Q8N2G4,F8WD77 | ||
|association_with_transcript=0bp_to_ENST00000397463,ENST00000449209,uc002ttm.3_5end | |||
|cluster_id=chr2:133427767..133427797,- | |||
|description=CAGE_peak_1_at_LYPD1_5end | |||
|id=chr2:133427767..133427797,- | |||
|ontology_enrichment_celltype=CL:0000359!1.95e-15!32;CL:0000222!4.41e-15!119;CL:0000055!2.26e-13!180;CL:0000183!1.46e-11!59;CL:0002321!1.51e-11!248;CL:0000220!2.17e-11!246;CL:0000192!2.25e-11!42;CL:0000514!2.25e-11!42;CL:0000393!2.56e-11!60;CL:0000211!2.56e-11!60;CL:0000187!4.93e-10!54;CL:0000680!9.10e-09!57;CL:0000056!9.10e-09!57;CL:0000355!9.10e-09!57;CL:0000133!2.74e-07!59;CL:0002539!3.45e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.28e-14;32!CL:0002539;8.78e-08;10!CL:0000192;1.08e-07;43!CL:1000497;2.86e-07;17!CL:0002518;2.86e-07;17!CL:1000449;5.61e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.89e-15,32;CL:0000222,1.24e-12,121;CL:0002321,3.24e-10,250;CL:0000192,8.97e-10,43;CL:0000514,8.97e-10,43;CL:0000393,2.45e-09,61;CL:0000211,2.45e-09,61;CL:0000187,5.22e-08,55;CL:0002539,8.68e-08,10;CL:1000497,3.03e-07,17;CL:0002518,3.03e-07,17;CL:1000449,5.70e-07,15;CL:0000680,6.94e-07,58;CL:0000056,6.94e-07,58;CL:0000355,6.94e-07,58;CL:0000133,7.00e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000514;1.08e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;6.78e-19;42!UBERON:0003509;6.78e-19;42!UBERON:0004572;6.78e-19;42!UBERON:0004573;6.86e-18;33!UBERON:0004571;6.86e-18;33!UBERON:0003528;1.85e-12;34!UBERON:0002020;1.85e-12;34!UBERON:0001869;2.29e-12;32!UBERON:0002791;2.82e-12;32!UBERON:0001893;4.66e-12;34!UBERON:0000947;7.08e-12;21!UBERON:0010191;7.08e-12;21!UBERON:0000073;7.16e-12;53!UBERON:0002616;7.16e-12;53!UBERON:0003914;1.13e-11;74!UBERON:0002780;2.01e-11;41!UBERON:0001890;2.01e-11;41!UBERON:0007500;3.91e-11;56!UBERON:0001981;3.91e-11;56!UBERON:0004537;3.91e-11;56!UBERON:0000956;1.13e-10;25!UBERON:0000203;1.13e-10;25!UBERON:0000955;2.01e-09;68!UBERON:0001017;2.77e-09;75!UBERON:0002619;5.29e-09;22!UBERON:0001016;1.19e-08;83!UBERON:0000055;1.97e-08;65!UBERON:0001950;5.65e-08;20!UBERON:0004237;8.78e-08;10!UBERON:0004695;8.78e-08;10!UBERON:0002111;8.78e-08;10!UBERON:0004178;8.78e-08;10!UBERON:0002049;9.20e-08;75!UBERON:0007798;9.20e-08;75!UBERON:0006555;5.61e-07;15!UBERON:0004819;5.61e-07;15!UBERON:0001285;5.61e-07;15!UBERON:0007684;5.61e-07;15!UBERON:0000489;7.62e-07;29!UBERON:0000025;8.91e-07;93 | |||
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| ||
|short_description=p1@LYPD1 | |||
}} | }} |
Latest revision as of 00:36, 17 September 2015
Short description: | p1@LYPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LYPD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397463, ENST00000449209, uc002ttm.3_5end |
EntrezGene: | LYPD1 |
HGNC: | 28431 |
UniProt: | Q8N2G4F8WD77 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.89e-15 | 32 |
mesodermal cell | 1.24e-12 | 121 |
embryonic cell | 3.24e-10 | 250 |
smooth muscle cell | 8.97e-10 | 43 |
smooth muscle myoblast | 8.97e-10 | 43 |
electrically responsive cell | 2.45e-09 | 61 |
electrically active cell | 2.45e-09 | 61 |
muscle cell | 5.22e-08 | 55 |
aortic smooth muscle cell | 8.68e-08 | 10 |
kidney cell | 3.03e-07 | 17 |
kidney epithelial cell | 3.03e-07 | 17 |
epithelial cell of nephron | 5.70e-07 | 15 |
muscle precursor cell | 6.94e-07 | 58 |
myoblast | 6.94e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.94e-07 | 58 |
neurectodermal cell | 7.00e-07 | 59 |