FFCP PHASE1:Hg19::chr12:123215306..123215366,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:123215306..123215366,- to FFCP PHASE1:Hg19::chr12:123215306..123215366,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27198 | |EntrezGene=27198 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4532 | |HGNC=4532 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXC0 | |UniProt=Q9BXC0 | ||
|association_with_transcript=23bp_to_ENST00000356987,ENST00000436083,uc001ucw.1_5end | |||
|cluster_id=chr12:123215306..123215366,- | |||
|description=CAGE_peak_1_at_HCAR1_5end | |||
|id=chr12:123215306..123215366,- | |||
|ontology_enrichment_celltype=CL:0000136!1.79e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000669;1.73e-11;4!CL:0000136;6.81e-10;13!CL:0002564;3.22e-09;3!CL:0000039;6.78e-09;7!CL:0000586;6.78e-09;7!CL:0000708;7.03e-09;3!CL:0002602;6.21e-07;2!CL:0002575;6.66e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,2.04e-11,4;CL:0002564,2.70e-09,3;CL:0000708,4.91e-09,3;CL:0000039,7.55e-09,7;CL:0000586,7.55e-09,7;CL:0000136,2.12e-08,15;CL:0002602,5.97e-07,2;CL:0002575,6.87e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;5.46e-12;4!DOID:1612;5.46e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.26e-12,4;DOID:1612,5.26e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.40e-17!115;UBERON:0002553!1.87e-10!70;UBERON:0003886!1.08e-09!63;UBERON:0002323!6.05e-09!46;UBERON:0000464!6.77e-09!104;UBERON:0005177!7.76e-09!107;UBERON:0004458!1.05e-08!49;UBERON:0000466!1.62e-08!126;UBERON:0002075!2.97e-08!18;UBERON:0000481!4.72e-08!347;UBERON:0002100!2.61e-07!216;UBERON:0000475!2.82e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.79e-14;5!UBERON:0002216;1.79e-14;5!UBERON:0011134;1.79e-14;5!UBERON:0002209;1.79e-14;5!UBERON:0002213;1.79e-14;5!UBERON:0007844;1.79e-14;5!UBERON:0011138;1.79e-14;5!UBERON:0001130;1.79e-14;5!UBERON:0001066;1.79e-14;5!UBERON:0001468;1.79e-14;5!UBERON:0003135;1.57e-10;11!UBERON:0003101;1.56e-09;22!UBERON:0000079;1.56e-09;22!UBERON:0002242;3.22e-09;3!UBERON:0003210;7.03e-09;3!UBERON:0004905;7.27e-09;8!UBERON:0000982;7.27e-09;8!UBERON:0004770;7.27e-09;8!UBERON:0006947;2.77e-08;3!UBERON:0004054;2.77e-08;3!UBERON:0000473;9.73e-08;8!UBERON:0000310;4.76e-07;10!UBERON:0006444;6.21e-07;2!UBERON:0001995;6.21e-07;2!UBERON:0004715;6.21e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.45e-14,5;UBERON:0002216,1.45e-14,5;UBERON:0011134,1.45e-14,5;UBERON:0002209,1.45e-14,5;UBERON:0002213,1.45e-14,5;UBERON:0005856,1.45e-14,5;UBERON:0005866,1.45e-14,5;UBERON:0005863,1.45e-14,5;UBERON:0007844,1.45e-14,5;UBERON:0011138,1.45e-14,5;UBERON:0001130,1.45e-14,5;UBERON:0001066,1.45e-14,5;UBERON:0001468,1.45e-14,5;UBERON:0002553,1.36e-11,61;UBERON:0003135,1.49e-10,11;UBERON:0003101,1.42e-09,22;UBERON:0000079,1.42e-09,22;UBERON:0003886,2.29e-09,54;UBERON:0002242,2.70e-09,3;UBERON:0003068,2.70e-09,3;UBERON:0002328,2.70e-09,3;UBERON:0004880,2.70e-09,3;UBERON:0003210,4.91e-09,3;UBERON:0004905,6.40e-09,8;UBERON:0000982,6.40e-09,8;UBERON:0004770,6.40e-09,8;UBERON:0006947,2.92e-08,3;UBERON:0004054,2.92e-08,3;UBERON:0002100,5.29e-08,199;UBERON:0000473,8.13e-08,8;UBERON:0002323,1.30e-07,46;UBERON:0003887,4.47e-07,12;UBERON:0000310,4.71e-07,10;UBERON:0004458,5.80e-07,49;UBERON:0006444,5.97e-07,2;UBERON:0001995,5.97e-07,2;UBERON:0004715,5.97e-07,2 | |||
|phase1_expression=0.181678379270557,0.856402095563933,1.26858963686374,0,5.81049422755474,0,0,0.631719873426831,3.65659879479774,0,0,0,0,7.54974753056284,9.94192127183747,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.933633106199299,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,2.58275720940538,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3216351836742,5.15091697256924,0,0,0,0,0,0,0,0.871901815541886,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,4.03671903643299,14.8226423403315,1.98013371716565,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64380861908043,14.004774589671,2.44138521329762,0.623912584592421,0,0,0,0,0,0,0,0,0,6.2656370388077,9.60801586670397,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,1.93375119346596,0,0,0,0,0,0,0,1.56869953835371,0,0.105551628892876,0,0,0.431831832204279,0,2.43851793789468,2.00675909541941,0,0,0.671624264166535,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,1.54048617114644,1.07452572308291,0,0.107420244868274,0,0.170453254832202,0,0,0.384380134730212,0.127612712494584,0,0,0,0,0,0,0,0,0,3.34942532423701,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3908847515827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51619630252546,0,0,0,0.71623345421307,0,0,0,0.281338832821026,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,5.72941074387513,11.5447199994978,7.24999575434793,0,8.13611680936852,0,0,0,0,0,0,0,0.331737779793674,0.295547618953547,1.09692698576986,0,0,0.153900517007594,0.113942055847001,0,1.16684937732704,0.325942115766024,0.957003479195758,0.549585560411174,9.06159119231679,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.353830258013357,0,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,1.76098157038881,0,6.31335044559025,0,0.61214552326098,0.31593289814244,0,0,1.32930774541437,0.330991955875499,1.56966459203613,2.38944859545918,0,0,0.520679215005393,0,0,1.22308667769421,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.316553979779393,0.391102765469606,0.160317640503067,0.640358984218058,0,1.29681375438695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.687481272035051,0,0.199679000498991,0,0,0.0671834724867263,0,0,1.96957955768059,1.64831716762333,1.88729922791718,1.67326718575073,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0.121499113316049,0,0.394028536495991,1.20645552710496,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,2.03961764736226,0,0,0,0,0,2.11444506695002,0.533937062838473,0.314408610199332,0.414239055347196,0,0,0,0,11.424373870759,12.534494701135,12.2538230705385,21.6395936268471,0,0,0,0.250381861413,0,0.665574309221114,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0.205116364240755,0,0.414943514785307,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0.163771917510097,0,0.135075169236789,0,0,0.126831620387814,0,2.19303106742873,0,0,0,0,0,0,0,0.532214220975833,0,0,0.271878931907327,0.131545547125698,0,2.66955364540966,1.0989032999072,0,1.68163297988273,0,0,0.47775168788705,1.28657779517981,0,4.88213986546126,0,0,0,0,0,5.59295566466361,0.118332000730565,0.511280428554946,1.69354820076372,0.4582137370881,0,0,0,0,0,0,0,2.3196288626764,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,1.96308467114945,0.297046400327086,1.2679671827502,0,2.16163011353663,3.35181017462601,0,0,0,0,0.730336388246517,2.2936464170227,0.430018749454354,0,0.203974470572744,1.30905207102113,0,0,0,0,0,0,0,2.2437542543236,2.40495664739004,1.8378979906969,2.25636785363138,0.303114792872958,0,0,0,0.639701945702943,1.1903221573187,0,0.248298857183432,0,1.2729431655633,5.05292972395548,0.217716747896961,0.342233301085281,0.336760265072938,2.438554983351,1.99596213927608,2.84911440138411,0,0,0.538951212639521,0,0,0,1.33151354837103,3.62292828463847,0 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| ||
|short_description=p1@HCAR1 | |||
}} | }} |
Latest revision as of 00:30, 17 September 2015
Short description: | p1@HCAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HCAR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000356987, ENST00000436083, uc001ucw.1_5end |
EntrezGene: | HCAR1 |
HGNC: | 4532 |
UniProt: | Q9BXC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 2.04e-11 | 4 |
nucleus pulposus cell of intervertebral disc | 2.70e-09 | 3 |
leptomeningeal cell | 4.91e-09 | 3 |
germ line cell | 7.55e-09 | 7 |
germ cell | 7.55e-09 | 7 |
fat cell | 2.12e-08 | 15 |
annulus pulposus cell | 5.97e-07 | 2 |
central nervous system pericyte | 6.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.26e-12 | 4 |
breast cancer | 5.26e-12 | 4 |