FFCP PHASE1:Hg19::chr9:2621798..2621828,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7436 | |EntrezGene=7436 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12698 | |HGNC=12698 | ||
|TSSclassifier=strong | |||
|UniProt=P98155,Q5VVF5,A8K0G2 | |UniProt=P98155,Q5VVF5,A8K0G2 | ||
|association_with_transcript=-5bp_to_,5bp_to_ENST00000382100,NM_001018056,NM_003383,uc003zhk.1,uc003zhl.1,uc003zhm.1,uc003zhn.1_5end | |association_with_transcript=-5bp_to_,5bp_to_ENST00000382100,NM_001018056,NM_003383,uc003zhk.1,uc003zhl.1,uc003zhm.1,uc003zhn.1_5end | ||
|cluster_id=chr9:2621798..2621828,+ | |||
|coexpression_cluster_id=C4816 | |coexpression_cluster_id=C4816 | ||
|description=CAGE_peak_4_at_VLDLR_5end | |description=CAGE_peak_4_at_VLDLR_5end | ||
|id=chr9:2621798..2621828,+ | |id=chr9:2621798..2621828,+ | ||
|ontology_enrichment_celltype=CL:0000325!6.82e-08!39 | |ontology_enrichment_celltype=CL:0000325!6.82e-08!39 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.64e-15!94;UBERON:0001016!2.64e-15!94;UBERON:0005743!2.79e-15!86;UBERON:0001049!1.12e-14!57;UBERON:0005068!1.12e-14!57;UBERON:0006241!1.12e-14!57;UBERON:0007135!1.12e-14!57;UBERON:0001017!1.25e-14!82;UBERON:0007023!2.10e-14!115;UBERON:0003075!1.05e-12!86;UBERON:0007284!1.05e-12!86;UBERON:0000955!1.26e-11!69;UBERON:0006238!1.26e-11!69;UBERON:0002616!1.26e-11!59;UBERON:0003080!1.57e-11!42;UBERON:0002346!3.12e-11!90;UBERON:0002780!3.45e-11!41;UBERON:0001890!3.45e-11!41;UBERON:0006240!3.45e-11!41;UBERON:0001893!8.25e-11!34;UBERON:0004121!1.06e-10!169;UBERON:0002791!1.84e-10!33;UBERON:0002020!2.79e-10!34;UBERON:0003528!2.79e-10!34;UBERON:0000924!8.13e-10!173;UBERON:0006601!8.13e-10!173;UBERON:0001869!9.42e-10!32;UBERON:0003056!1.97e-09!61;UBERON:0004111!5.43e-09!241;UBERON:0000025!1.04e-08!194;UBERON:0000956!1.23e-08!25;UBERON:0000203!1.23e-08!25;UBERON:0000475!4.35e-08!365;UBERON:0000064!8.99e-08!219;UBERON:0000033!1.42e-07!123;UBERON:0000483!1.52e-07!309;UBERON:0000119!1.58e-07!312;UBERON:0005156!3.42e-07!59;UBERON:0000990!3.42e-07!59;UBERON:0002619!3.47e-07!22;UBERON:0000153!3.53e-07!129;UBERON:0007811!3.53e-07!129;UBERON:0000477!5.64e-07!286 | |ontology_enrichment_uberon=UBERON:0000073!2.64e-15!94;UBERON:0001016!2.64e-15!94;UBERON:0005743!2.79e-15!86;UBERON:0001049!1.12e-14!57;UBERON:0005068!1.12e-14!57;UBERON:0006241!1.12e-14!57;UBERON:0007135!1.12e-14!57;UBERON:0001017!1.25e-14!82;UBERON:0007023!2.10e-14!115;UBERON:0003075!1.05e-12!86;UBERON:0007284!1.05e-12!86;UBERON:0000955!1.26e-11!69;UBERON:0006238!1.26e-11!69;UBERON:0002616!1.26e-11!59;UBERON:0003080!1.57e-11!42;UBERON:0002346!3.12e-11!90;UBERON:0002780!3.45e-11!41;UBERON:0001890!3.45e-11!41;UBERON:0006240!3.45e-11!41;UBERON:0001893!8.25e-11!34;UBERON:0004121!1.06e-10!169;UBERON:0002791!1.84e-10!33;UBERON:0002020!2.79e-10!34;UBERON:0003528!2.79e-10!34;UBERON:0000924!8.13e-10!173;UBERON:0006601!8.13e-10!173;UBERON:0001869!9.42e-10!32;UBERON:0003056!1.97e-09!61;UBERON:0004111!5.43e-09!241;UBERON:0000025!1.04e-08!194;UBERON:0000956!1.23e-08!25;UBERON:0000203!1.23e-08!25;UBERON:0000475!4.35e-08!365;UBERON:0000064!8.99e-08!219;UBERON:0000033!1.42e-07!123;UBERON:0000483!1.52e-07!309;UBERON:0000119!1.58e-07!312;UBERON:0005156!3.42e-07!59;UBERON:0000990!3.42e-07!59;UBERON:0002619!3.47e-07!22;UBERON:0000153!3.53e-07!129;UBERON:0007811!3.53e-07!129;UBERON:0000477!5.64e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.52e-09;53!UBERON:0002616;2.52e-09;53!UBERON:0001893;4.16e-09;34!UBERON:0003528;4.27e-09;34!UBERON:0002020;4.27e-09;34!UBERON:0002780;5.22e-09;41!UBERON:0001890;5.22e-09;41!UBERON:0002791;5.93e-09;32!UBERON:0000956;6.37e-09;25!UBERON:0000203;6.37e-09;25!UBERON:0001869;8.89e-09;32!UBERON:0002619;3.23e-07;22 | |||
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| ||
|short_description=p4@VLDLR | |short_description=p4@VLDLR | ||
}} | }} |
Latest revision as of 00:27, 17 September 2015
Short description: | p4@VLDLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_VLDLR_5end |
Coexpression cluster: | C4816_mature_Fibroblast_pancreatic_Smooth_non_left_ovary |
Association with transcript: | -5bp_to_, 5bp_to_ENST00000382100, NM_001018056, NM_003383, uc003zhk.1, uc003zhl.1, uc003zhm.1, uc003zhn.1_5end |
EntrezGene: | VLDLR |
HGNC: | 12698 |
UniProt: | P98155Q5VVF5A8K0G2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data