FFCP PHASE1:Hg19::chr10:128076861..128076899,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8038 | |EntrezGene=8038 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=190 | |HGNC=190 | ||
|TSSclassifier=strong | |||
|UniProt=O43184,Q5JRP2 | |UniProt=O43184,Q5JRP2 | ||
|association_with_transcript=124bp_to_ENST00000368676,ENST00000368679,ENST00000448723_5end | |association_with_transcript=124bp_to_ENST00000368676,ENST00000368679,ENST00000448723_5end | ||
|cluster_id=chr10:128076861..128076899,- | |||
|description=CAGE_peak_3_at_ADAM12_5end | |description=CAGE_peak_3_at_ADAM12_5end | ||
|id=chr10:128076861..128076899,- | |id=chr10:128076861..128076899,- | ||
|ontology_enrichment_celltype=CL:0000055!7.17e-35!180;CL:0000680!1.30e-16!57;CL:0000056!1.30e-16!57;CL:0000355!1.30e-16!57;CL:0000057!7.28e-16!75;CL:0000187!3.05e-15!54;CL:0000183!4.70e-15!59;CL:0000192!2.16e-13!42;CL:0000514!2.16e-13!42;CL:0000393!5.54e-12!60;CL:0000211!5.54e-12!60;CL:0000359!1.89e-11!32;CL:0000048!1.91e-08!430;CL:0000136!3.60e-08!15;CL:0000723!8.97e-08!436;CL:0002620!1.44e-07!23;CL:0000034!3.14e-07!444;CL:0000499!8.42e-07!27 | |ontology_enrichment_celltype=CL:0000055!7.17e-35!180;CL:0000680!1.30e-16!57;CL:0000056!1.30e-16!57;CL:0000355!1.30e-16!57;CL:0000057!7.28e-16!75;CL:0000187!3.05e-15!54;CL:0000183!4.70e-15!59;CL:0000192!2.16e-13!42;CL:0000514!2.16e-13!42;CL:0000393!5.54e-12!60;CL:0000211!5.54e-12!60;CL:0000359!1.89e-11!32;CL:0000048!1.91e-08!430;CL:0000136!3.60e-08!15;CL:0000723!8.97e-08!436;CL:0002620!1.44e-07!23;CL:0000034!3.14e-07!444;CL:0000499!8.42e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.75e-12;32!CL:0000192;9.90e-11;43!CL:0000134;1.10e-10;55!CL:0000723;8.67e-10;61!CL:0000048;1.08e-09;58!CL:0000187;2.34e-09;55!CL:0002320;1.52e-08;188!CL:0000499;1.94e-08;28!CL:0002620;2.45e-08;23!CL:0000136;4.44e-08;13!CL:0000393;5.00e-08;61!CL:0000211;5.00e-08;61!CL:0002334;3.66e-07;12!CL:0000057;3.67e-07;73!CL:0000034;5.09e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.12e-18,58;CL:0000056,1.12e-18,58;CL:0000355,1.12e-18,58;CL:0000057,6.98e-18,76;CL:0000048,1.63e-17,427;CL:0000187,4.70e-17,55;CL:0000723,1.09e-16,433;CL:0000034,3.24e-15,441;CL:0000192,4.87e-15,43;CL:0000514,4.87e-15,43;CL:0000393,3.04e-14,61;CL:0000211,3.04e-14,61;CL:0000359,5.72e-13,32;CL:0000136,1.57e-09,15;CL:0000499,2.01e-08,28;CL:0002620,2.87e-08,23;CL:0002320,7.36e-08,361;CL:0000222,9.69e-08,121;CL:0002334,2.94e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;9.90e-11;43!CL:0000355;9.02e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!7.29e-08!14 | |ontology_enrichment_disease=DOID:2394!7.29e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.75e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.86e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.95e-17!83;UBERON:0002329!3.95e-17!83;UBERON:0003077!3.95e-17!83;UBERON:0003059!3.95e-17!83;UBERON:0007282!3.95e-17!83;UBERON:0009618!3.95e-17!83;UBERON:0007285!3.95e-17!83;UBERON:0004290!6.45e-17!70;UBERON:0001134!7.26e-16!61;UBERON:0002036!7.26e-16!61;UBERON:0003082!7.26e-16!61;UBERON:0002385!2.45e-15!63;UBERON:0001015!2.45e-15!63;UBERON:0000383!2.45e-15!63;UBERON:0000486!6.49e-14!82;UBERON:0000475!5.42e-09!365;UBERON:0001637!1.16e-08!42;UBERON:0003509!1.16e-08!42;UBERON:0004572!1.16e-08!42;UBERON:0004573!3.00e-08!33;UBERON:0004571!3.00e-08!33;UBERON:0005256!1.45e-07!143;UBERON:0004872!3.67e-07!84;UBERON:0001013!5.43e-07!14;UBERON:0002049!5.63e-07!79;UBERON:0007798!5.63e-07!79;UBERON:0002199!5.75e-07!45;UBERON:0002416!5.75e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.84e-08;198!UBERON:0002385;2.38e-08;31!UBERON:0001015;2.38e-08;31!UBERON:0000383;2.38e-08;31!UBERON:0001013;4.68e-08;14!UBERON:0004573;5.17e-08;33!UBERON:0004571;5.17e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.82e-18,71;UBERON:0003059,1.82e-18,71;UBERON:0007282,1.82e-18,71;UBERON:0004290,1.82e-18,71;UBERON:0009618,1.82e-18,71;UBERON:0007524,2.55e-18,73;UBERON:0003077,6.75e-18,72;UBERON:0007285,6.75e-18,72;UBERON:0001134,1.20e-17,62;UBERON:0002036,1.20e-17,62;UBERON:0003082,1.20e-17,62;UBERON:0002385,1.85e-16,64;UBERON:0001015,1.85e-16,64;UBERON:0000383,1.85e-16,64;UBERON:0007503,7.66e-16,78;UBERON:0000486,7.35e-15,83;UBERON:0001637,1.33e-09,42;UBERON:0003509,1.33e-09,42;UBERON:0004572,1.33e-09,42;UBERON:0005256,4.20e-09,122;UBERON:0004573,5.92e-09,33;UBERON:0004571,5.92e-09,33;UBERON:0002384,1.41e-08,371;UBERON:0001013,4.12e-08,14;UBERON:0003104,1.21e-07,160;UBERON:0009142,1.21e-07,160;UBERON:0002199,3.29e-07,46;UBERON:0002416,3.29e-07,46;UBERON:0002049,5.06e-07,78;UBERON:0007798,5.06e-07,78 | |||
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| ||
|short_description=p3@ADAM12 | |short_description=p3@ADAM12 | ||
}} | }} |
Latest revision as of 00:22, 17 September 2015
Short description: | p3@ADAM12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ADAM12_5end |
Coexpression cluster: | NA |
Association with transcript: | 124bp_to_ENST00000368676, ENST00000368679, ENST00000448723_5end |
EntrezGene: | ADAM12 |
HGNC: | 190 |
UniProt: | O43184Q5JRP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.12e-18 | 58 |
myoblast | 1.12e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.12e-18 | 58 |
fibroblast | 6.98e-18 | 76 |
multi fate stem cell | 1.63e-17 | 427 |
muscle cell | 4.70e-17 | 55 |
somatic stem cell | 1.09e-16 | 433 |
stem cell | 3.24e-15 | 441 |
smooth muscle cell | 4.87e-15 | 43 |
smooth muscle myoblast | 4.87e-15 | 43 |
electrically responsive cell | 3.04e-14 | 61 |
electrically active cell | 3.04e-14 | 61 |
vascular associated smooth muscle cell | 5.72e-13 | 32 |
fat cell | 1.57e-09 | 15 |
stromal cell | 2.01e-08 | 28 |
skin fibroblast | 2.87e-08 | 23 |
connective tissue cell | 7.36e-08 | 361 |
mesodermal cell | 9.69e-08 | 121 |
preadipocyte | 2.94e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
somite | 1.82e-18 | 71 |
presomitic mesoderm | 1.82e-18 | 71 |
presumptive segmental plate | 1.82e-18 | 71 |
dermomyotome | 1.82e-18 | 71 |
trunk paraxial mesoderm | 1.82e-18 | 71 |
dense mesenchyme tissue | 2.55e-18 | 73 |
paraxial mesoderm | 6.75e-18 | 72 |
presumptive paraxial mesoderm | 6.75e-18 | 72 |
skeletal muscle tissue | 1.20e-17 | 62 |
striated muscle tissue | 1.20e-17 | 62 |
myotome | 1.20e-17 | 62 |
muscle tissue | 1.85e-16 | 64 |
musculature | 1.85e-16 | 64 |
musculature of body | 1.85e-16 | 64 |
epithelial vesicle | 7.66e-16 | 78 |
multilaminar epithelium | 7.35e-15 | 83 |
artery | 1.33e-09 | 42 |
arterial blood vessel | 1.33e-09 | 42 |
arterial system | 1.33e-09 | 42 |
trunk mesenchyme | 4.20e-09 | 122 |
systemic artery | 5.92e-09 | 33 |
systemic arterial system | 5.92e-09 | 33 |
connective tissue | 1.41e-08 | 371 |
adipose tissue | 4.12e-08 | 14 |
mesenchyme | 1.21e-07 | 160 |
entire embryonic mesenchyme | 1.21e-07 | 160 |
integument | 3.29e-07 | 46 |
integumental system | 3.29e-07 | 46 |
vasculature | 5.06e-07 | 78 |
vascular system | 5.06e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.86e-09 | 14 |