FFCP PHASE1:Hg19::chr2:3391873..3391896,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51112 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24284 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_ENST00000411973_5end | |||
|cluster_id=chr2:3391873..3391896,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_9_at_TRAPPC12_5end | |||
|id=chr2:3391873..3391896,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.89e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.97e-34;1!UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10!UBERON:0003056;2.74e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.97e-34;1!UBERON:0001785;5.97e-34;1!UBERON:0002464;5.97e-34;1!UBERON:0004904;5.97e-34;1!UBERON:0001021;5.97e-34;1!UBERON:0003714;9.86e-18;2!UBERON:0005162;9.86e-18;2!UBERON:0000122;9.86e-18;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.05e-34,1;UBERON:0001785,5.05e-34,1;UBERON:0002464,5.05e-34,1;UBERON:0004904,5.05e-34,1;UBERON:0001021,5.05e-34,1;UBERON:0003902,5.05e-34,1;UBERON:0005425,5.05e-34,1;UBERON:0003714,9.07e-18,2;UBERON:0005162,9.07e-18,2;UBERON:0000122,9.07e-18,2;UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0001781,1.44e-09,4;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0000966,8.48e-07,6;UBERON:0005388,8.48e-07,6;UBERON:0001802,8.48e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0.087834785693126,1.70272798147026,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0.25248486685276,0,0,1.17217447210047,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0.241718899183244,0.200506470303285,0.0920809889358963,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0.0821154570532092,0,0.0882561266915003,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0,0.161475645631851,1.42769420259154,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,1.1598144313382,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0.126166424835079,0,0.380095503034311,0.101988829741982,0,0,0,4.84983668596732,9.64670868562242,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p9@TRAPPC12 | |||
}} |
Latest revision as of 00:19, 17 September 2015
Short description: | p9@TRAPPC12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TRAPPC12_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -1bp_to_ENST00000411973_5end |
EntrezGene: | TRAPPC12 |
HGNC: | 24284 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.05e-34 | 1 |
cranial nerve | 5.05e-34 | 1 |
nerve trunk | 5.05e-34 | 1 |
nerve connecting eye with brain | 5.05e-34 | 1 |
nerve | 5.05e-34 | 1 |
retinal neural layer | 5.05e-34 | 1 |
presumptive neural retina | 5.05e-34 | 1 |
neural tissue | 9.07e-18 | 2 |
multi cell component structure | 9.07e-18 | 2 |
neuron projection bundle | 9.07e-18 | 2 |
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
layer of retina | 1.44e-09 | 4 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
retina | 8.48e-07 | 6 |
photoreceptor array | 8.48e-07 | 6 |
posterior segment of eyeball | 8.48e-07 | 6 |