FFCP PHASE1:Hg19::chr12:123011736..123011752,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9735 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17255 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-40bp_to_ENST00000535410_5end | |||
|cluster_id=chr12:123011736..123011752,+ | |||
|description=CAGE_peak_3_at_KNTC1_5end | |||
|id=chr12:123011736..123011752,+ | |||
|ontology_enrichment_celltype=CL:0000838!6.48e-10!52;CL:0000542!1.01e-09!53;CL:0000051!1.01e-09!53;CL:0000037!5.57e-08!172;CL:0000566!5.57e-08!172;CL:0000738!6.44e-08!140;CL:0000791!2.42e-07!18;CL:0000789!2.42e-07!18;CL:0002420!2.42e-07!18;CL:0002419!2.42e-07!18;CL:0000790!2.42e-07!18;CL:0000988!2.90e-07!182;CL:0002032!5.27e-07!165;CL:0000837!5.27e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.15e-11;18!CL:0000789;1.15e-11;18!CL:0002419;1.15e-11;18!CL:0000625;2.17e-10;11!CL:0000084;1.36e-09;25!CL:0000542;5.37e-09;53!CL:0000236;2.74e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.31e-14,52;CL:0000542,2.28e-13,53;CL:0000051,2.28e-13,53;CL:0000791,2.42e-12,18;CL:0000789,2.42e-12,18;CL:0002420,2.42e-12,18;CL:0002419,2.42e-12,18;CL:0000790,2.42e-12,18;CL:0000625,6.96e-11,11;CL:0000084,3.92e-10,25;CL:0000827,3.92e-10,25;CL:0000236,9.49e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.15e-11;18!CL:0000051;5.37e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.13e-09;15!UBERON:0000179;6.13e-09;15!UBERON:0000463;6.13e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.57e-09,15;UBERON:0000179,2.57e-09,15;UBERON:0000463,2.57e-09,15 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.704772020479856,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0.487932798790507,0.246242116153576,0,0,1.43117993565528,1.09499540058307,0.125542639594803,0.458480434487708,0.164201178899891,0.550975469195755,0.786728553697808,0,0.309632246632152,0,0,0,0.309868802321207,0.142169232487422,0.587200878669695,1.10799081706375,0.601633342410425,0.434021741431704,0.223915474239924,0.32389366601898,0.77272670290256,0.290796477559129,0.755751887377619,1.4555043671269,0.464858073811369,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0.376484679085209,0.545812300115692,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0.659702600373432,0.398927315243264,0,0.580418477257168,0,0,1.25624332628372,0.521482918420201,0,0.605399502633369,0.368277635987565,0.316462387440884,0.422510572623884,0.425208599930087,0.838634582033504,0.898629049171961,0.300353785683013,0.32145117339416,0.855038231223746,0.79566670879636,0,0,2.18455444504853,5.33705552318133,4.26730222566507,4.80475184443215,2.87376219977242,0.661044872784862,1.90810750907073,2.27685187643779,1.17447437874188,1.52909291250092,1.32171328579026,1.12101712596307,0.263384084775077,3.540775862049,0.393010762749165,0.822405995998037,3.00935691703221,2.60737813306872,1.89379122293893,0,1.11410456885174,3.24066498222321,1.77227115666897,6.22848886659536,0.768547918354051,0.780356085359269,0,0.552700035571697,1.15921234294021,2.66915813691709,4.81573490561484,0,1.0197840842781,1.91610246800961,1.37450978193052,3.28925599625354,1.27426165729639,1.95325036156926,1.90090408889675,3.16207750063323,2.17577238962511,3.74792179657038,2.60454977248419,0,2.21767417547206,1.33720097891754,1.44824403882799,0,0.670700859703636,0.383587685530591,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0,0.175669571386252,1.57174890597255,0,0,0.97364218096405,0.174129737299267,0.531831842075461,0.715471872916026,1.71598473234038,0.371457501329565,0.39752481473341,1.72046919021225,0.694281003215189,0,0.419499436209906,0.550236083880135,0.626984899610432,1.55050055501597,0.71153252537342,3.3472061276467,0.402829317109147,0,0,0.367663080345869,0,1.07159673940896,0.44905874525234,0.112611480483322,0,0,0.183201743930407,2.63560834872127,3.87780264148325,0,0,0.25326102332916,1.45650098894541,1.14734648299525,1.41867352879343,0.560677600142307,0,0,0,0.538842688278752,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,1.05691048779388,1.13311061057692,0.280901613404497,0.408308342509787,0.491337269247072,0.206651562351531,0,0,0,0,0.841680569770331,1.00094815897571,0.277064115484183,0,0,0.600952235626387,0.113432183160021,2.15267562826634,0,0.847727604638247,0.900273288253207,0.412210116953756,0.772921620136887,0,2.53164498361899,1.07180705677318,2.52433774244115,0.460249493211497,1.13152239773168,0.710019185033229,0.403008392910561,0.67824236924195,0.193260853163297,0.545492241181669,0.286804595389004,0.853815942907168,1.06023814657188,1.51052125730374,1.0366105501537,0.756962552626885,1.09493207722749,0,0,0,0.464367928031979,0,1.18306800039844,1.01150814046861,0.964044119533928,1.10293972732394,0,0.949082476444386,0.674156540800822,0.392442930250692,1.15424147083917,0,0,0,0,0,0,0.590789906681404,0.882926198829301,0.737930631258681,0.514703430895577,0.109750285408626,0,0,0.925884451585296,0.325808305310325,0,0,0.811512834825538,0.117408694235822,0.721832238805369,0.462985512576611,0.951270761172991,0.790204397959275,1.71697232418975,0.984868024349589,0.936017060556951,0.891786973732369,0,0.503946384596579,0.283550194484773,0.358234090811393,0,0.383382679165211,0.985326475791887,0.264145302039678,0.621984346622316,0.576479813667846,0.50496973370552,0.317489471460845,0.763976851116555,0,0,0.719792448923265,0,0.857479297891735,0.224262168690721,0,0.36669142910475,1.16344544182,0,0.845302752556,0.26593811658487,0,0.257207374262142,1.41849132023278,0.266422179016099,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0.718874566474748,0,1.42636905040718,0.289562613335158,0.61642896765115,0.716243852959582,0.336255431980582,2.1673383622212,1.50939302401662,1.54011643535698,0,2.60279707715243,0.773288812777695,0.167516265334349,0.637938751653163,0.749007023947182,0,2.07207756718018,0,0,0.271265023699736,0,0,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0,0.60818530127658,0,0,1.24060815673732,0.862856803274467,1.17400313583789,0,1.66435439510497,0.30239029332968,0.496215615637554,2.14846762603287,0,0.256278298511402,0.511707249066704,0.482561763430822,0,0.154209693802656,0,0.246381468041427,0,0.232420756919918,1.20859449591622,0.200506470303285,0.920809889358963,0.459257792658427,0.182091168006717,0.131124414959424,0,0.462092022626489,0,1.46139224653261,0.73886140225013,0,0.510281115829547,0.431831832204279,0,0,0,0,0,0.447749509444357,0.657779629937804,0.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| |||
|short_description=p3@KNTC1 | |||
}} |
Latest revision as of 00:19, 17 September 2015
Short description: | p3@KNTC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KNTC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -40bp_to_ENST00000535410_5end |
EntrezGene: | KNTC1 |
HGNC: | 17255 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.31e-14 | 52 |
lymphocyte | 2.28e-13 | 53 |
common lymphoid progenitor | 2.28e-13 | 53 |
mature alpha-beta T cell | 2.42e-12 | 18 |
alpha-beta T cell | 2.42e-12 | 18 |
immature T cell | 2.42e-12 | 18 |
mature T cell | 2.42e-12 | 18 |
immature alpha-beta T cell | 2.42e-12 | 18 |
CD8-positive, alpha-beta T cell | 6.96e-11 | 11 |
T cell | 3.92e-10 | 25 |
pro-T cell | 3.92e-10 | 25 |
B cell | 9.49e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
blood | 2.57e-09 | 15 |
haemolymphatic fluid | 2.57e-09 | 15 |
organism substance | 2.57e-09 | 15 |