FFCP PHASE1:Hg19::chr12:123006803..123006854,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65117 | |EntrezGene=65117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30559 | |HGNC=30559 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000532186_5end | |association_with_transcript=0bp_to_ENST00000532186_5end | ||
|cluster_id=chr12:123006803..123006854,- | |||
|description=CAGE_peak_3_at_RSRC2_5end | |description=CAGE_peak_3_at_RSRC2_5end | ||
|id=chr12:123006803..123006854,- | |id=chr12:123006803..123006854,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!2.75e-07!239;DOID:162!4.70e-07!235 | |ontology_enrichment_disease=DOID:14566!2.75e-07!239;DOID:162!4.70e-07!235 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.93e-11!57;UBERON:0005068!1.93e-11!57;UBERON:0006241!1.93e-11!57;UBERON:0007135!1.93e-11!57;UBERON:0002780!1.87e-10!41;UBERON:0001890!1.87e-10!41;UBERON:0006240!1.87e-10!41;UBERON:0000073!2.32e-10!94;UBERON:0001016!2.32e-10!94;UBERON:0001017!3.07e-10!82;UBERON:0003080!3.95e-10!42;UBERON:0005743!1.21e-09!86;UBERON:0007023!2.87e-09!115;UBERON:0002020!4.10e-09!34;UBERON:0003528!4.10e-09!34;UBERON:0002616!1.67e-08!59;UBERON:0002791!6.28e-08!33;UBERON:0002346!6.75e-08!90;UBERON:0000955!7.65e-08!69;UBERON:0006238!7.65e-08!69;UBERON:0001893!9.96e-08!34;UBERON:0001869!1.04e-07!32;UBERON:0002619!1.66e-07!22;UBERON:0000956!6.15e-07!25;UBERON:0000203!6.15e-07!25;UBERON:0003075!6.45e-07!86;UBERON:0007284!6.45e-07!86 | |ontology_enrichment_uberon=UBERON:0001049!1.93e-11!57;UBERON:0005068!1.93e-11!57;UBERON:0006241!1.93e-11!57;UBERON:0007135!1.93e-11!57;UBERON:0002780!1.87e-10!41;UBERON:0001890!1.87e-10!41;UBERON:0006240!1.87e-10!41;UBERON:0000073!2.32e-10!94;UBERON:0001016!2.32e-10!94;UBERON:0001017!3.07e-10!82;UBERON:0003080!3.95e-10!42;UBERON:0005743!1.21e-09!86;UBERON:0007023!2.87e-09!115;UBERON:0002020!4.10e-09!34;UBERON:0003528!4.10e-09!34;UBERON:0002616!1.67e-08!59;UBERON:0002791!6.28e-08!33;UBERON:0002346!6.75e-08!90;UBERON:0000955!7.65e-08!69;UBERON:0006238!7.65e-08!69;UBERON:0001893!9.96e-08!34;UBERON:0001869!1.04e-07!32;UBERON:0002619!1.66e-07!22;UBERON:0000956!6.15e-07!25;UBERON:0000203!6.15e-07!25;UBERON:0003075!6.45e-07!86;UBERON:0007284!6.45e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;9.90e-08;34!UBERON:0002020;9.90e-08;34!UBERON:0002791;1.12e-07;32!UBERON:0002780;1.47e-07;41!UBERON:0001890;1.47e-07;41!UBERON:0002619;4.93e-07;22!UBERON:0001869;7.67e-07;32!UBERON:0000956;7.85e-07;25!UBERON:0000203;7.85e-07;25!UBERON:0000073;9.65e-07;53!UBERON:0002616;9.65e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0003528;9.90e-08;34!UBERON:0002020;9.90e-08;34!UBERON:0002791;1.12e-07;32!UBERON:0002780;1.47e-07;41!UBERON:0001890;1.47e-07;41!UBERON:0002619;4.93e-07;22!UBERON:0001869;7.67e-07;32!UBERON:0000956;7.85e-07;25!UBERON:0000203;7.85e-07;25!UBERON:0000073;9.65e-07;53!UBERON:0002616;9.65e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.57e-12,56;UBERON:0005068,2.57e-12,56;UBERON:0006241,2.57e-12,56;UBERON:0007135,2.57e-12,56;UBERON:0000073,5.40e-11,53;UBERON:0002616,5.40e-11,53;UBERON:0002346,1.58e-10,86;UBERON:0001016,2.13e-10,89;UBERON:0001017,3.19e-10,81;UBERON:0002780,7.14e-10,41;UBERON:0001890,7.14e-10,41;UBERON:0003080,7.14e-10,41;UBERON:0006240,7.14e-10,41;UBERON:0003075,2.75e-09,82;UBERON:0007284,2.75e-09,82;UBERON:0003528,9.14e-09,34;UBERON:0002020,9.14e-09,34;UBERON:0000955,5.27e-08,68;UBERON:0006238,5.27e-08,68;UBERON:0002791,6.22e-08,32;UBERON:0010371,8.33e-08,104;UBERON:0007023,2.93e-07,114;UBERON:0002619,4.20e-07,22;UBERON:0004121,5.19e-07,171;UBERON:0000924,5.19e-07,171;UBERON:0006601,5.19e-07,171;UBERON:0001869,6.23e-07,32;UBERON:0001893,6.63e-07,34 | |||
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| ||
|short_description=p3@RSRC2 | |short_description=p3@RSRC2 | ||
}} | }} |
Latest revision as of 00:15, 17 September 2015
Short description: | p3@RSRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RSRC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000532186_5end |
EntrezGene: | RSRC2 |
HGNC: | 30559 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.57e-12 | 56 |
neural rod | 2.57e-12 | 56 |
future spinal cord | 2.57e-12 | 56 |
neural keel | 2.57e-12 | 56 |
regional part of nervous system | 5.40e-11 | 53 |
regional part of brain | 5.40e-11 | 53 |
neurectoderm | 1.58e-10 | 86 |
nervous system | 2.13e-10 | 89 |
central nervous system | 3.19e-10 | 81 |
regional part of forebrain | 7.14e-10 | 41 |
forebrain | 7.14e-10 | 41 |
anterior neural tube | 7.14e-10 | 41 |
future forebrain | 7.14e-10 | 41 |
neural plate | 2.75e-09 | 82 |
presumptive neural plate | 2.75e-09 | 82 |
brain grey matter | 9.14e-09 | 34 |
gray matter | 9.14e-09 | 34 |
brain | 5.27e-08 | 68 |
future brain | 5.27e-08 | 68 |
regional part of telencephalon | 6.22e-08 | 32 |
ecto-epithelium | 8.33e-08 | 104 |
adult organism | 2.93e-07 | 114 |
regional part of cerebral cortex | 4.20e-07 | 22 |
ectoderm-derived structure | 5.19e-07 | 171 |
ectoderm | 5.19e-07 | 171 |
presumptive ectoderm | 5.19e-07 | 171 |
cerebral hemisphere | 6.23e-07 | 32 |
telencephalon | 6.63e-07 | 34 |