FFCP PHASE1:Hg19::chr6:170871224..170871263,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr6:170871224..170871263,+ to FFCP PHASE1:Hg19::chr6:170871224..170871263,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6908 | |EntrezGene=6908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11588 | |HGNC=11588 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=114bp_to_L37705_5end | |||
|cluster_id=chr6:170871224..170871263,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_TBP_5end | |||
|id=chr6:170871224..170871263,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;5.45e-23;2!CL:0002032;2.19e-12;1!CL:0000557;2.19e-12;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.19e-12;1!UBERON:0007297;8.05e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;8.05e-07;2!DOID:4236;8.05e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,6.07e-07,2;DOID:4236,6.07e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.19e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.19e-12;1!UBERON:0001301;2.19e-12;1!UBERON:0002171;2.19e-12;1!UBERON:0001785;2.19e-12;1!UBERON:0002464;2.19e-12;1!UBERON:0004904;2.19e-12;1!UBERON:0001021;2.19e-12;1!UBERON:0006518;2.19e-12;1!UBERON:0008949;2.19e-12;1!UBERON:0000101;2.19e-12;1!UBERON:0002167;2.19e-12;1!UBERON:0003135;9.67e-10;11!UBERON:0003101;2.42e-08;22!UBERON:0000079;2.42e-08;22!UBERON:0003714;8.05e-07;2!UBERON:0005162;8.05e-07;2!UBERON:0000122;8.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,9.92e-13,1;UBERON:0006518,9.92e-13,1;UBERON:0008949,9.92e-13,1;UBERON:0000101,9.92e-13,1;UBERON:0002167,9.92e-13,1;UBERON:0000941,1.57e-12,1;UBERON:0001785,1.57e-12,1;UBERON:0002464,1.57e-12,1;UBERON:0004904,1.57e-12,1;UBERON:0001021,1.57e-12,1;UBERON:0003902,1.57e-12,1;UBERON:0005425,1.57e-12,1;UBERON:0001301,3.45e-12,1;UBERON:0003135,1.16e-09,11;UBERON:0003101,2.88e-08,22;UBERON:0000079,2.88e-08,22;UBERON:0003714,6.80e-07,2;UBERON:0005162,6.80e-07,2;UBERON:0000122,6.80e-07,2 | |||
|phase1_expression=0,0,0.563817616383885,0,0.446961094427288,0,0,0,0.522371256399677,0.245733936501509,0,0.218441372130172,0,0,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0,0,0.313454721478088,0,0.136874425072884,0,0.458480434487708,0.164201178899891,0.157421562627358,0,0,0.309632246632152,0,0,0.369754010166788,0.154934401160603,0.142169232487422,0,0,0,0,0.447830948479849,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0,0.28769239232215,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0.852449501065388,0,0,0,0,0,0,0,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0.300353785683013,0.16072558669708,0.285012743741249,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0,0,0.501559486172034,0,0,0,0.222820913770347,0.294605907474837,0,0,0.128091319725675,0.390178042679635,0.164437904603676,0,0.579606171470105,0.593146252648242,0.267540828089713,0,0.226618685395132,0.383220493601921,0,0.506039384039006,0,0,0,0,0.383959833463255,0,0.473554504088034,0,0,0,0.289648807765598,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.785874452986276,0.364295288292542,0,0.324547393654683,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.506522046658319,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0.612975591598039,0.150238058906597,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0,0,0,0.252433774244115,0.460249493211497,0.161646056818812,0.355009592516614,0.10075209822764,0.508681776931463,0,0.272746120590835,0.286804595389004,0.487894824518382,0.265059536642971,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0,0,0,0.269662616320329,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.301586917234893,0.185176890317059,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0.246217006087397,0,0.445893486866185,0,0,0,0,0,0.383382679165211,0.985326475791887,0.44024217006613,1.03664057770386,0.432359860250884,0.88369703398466,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0.571652865261156,0,0,0.07333828582095,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0.542621605391443,1.64648067356154,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.128343036279748,1.01637849688985,1.30139853857622,0,0.167516265334349,0,0,0,0.414415513436035,0.36807447515742,0,0,0,0,0,0.117141414992713,0.601892199455438,0,0,0,0,0.260650843404249,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0.992431231275107,0.306923946576125,0.280660094433074,0.512556597022804,0,0,0,0.308419387605311,0.177561725313127,0.0821271560138091,0.519254429183621,0,1.0877350463246,0.601519410909855,0.276242966807689,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0.325378394664303,0.824328093181778,0.27470839445503,0.330037999682352,0,0,0,0.773365746336976,0,0,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0,0.2023155617111,0.929691098594572,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0,0,0,0,0.6196469961995,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.427296284509893,0,0,0.371606350251437,0,0.142283686696828,0,0.199579371432817,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0.687010689511529,0.307240764308458,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0.111443384277478,0,0,0.593929361665277,0,0,0,0.111308705022906,0,0.422250816255987,0.19924798825107,0.828851746593443,0,0.102268682502155,0,0,0.179736702294654,0.179021174675609,0,0.197286811273867,0,0,0,0.649376687132959,0,0.260427761085233,0.0874599999961957,0.724999575434793,0.1137934482855,0,0,0.344743373241465,0.583209226766509,1.56262495439963,0.885741385813839,0,0,0.221158519862449,0,0.438770794307945,0.10893846351899,0,0.692552326534174,0.113942055847001,0,0.718061155278177,0.325942115766024,0,0.915975934018623,2.13213910407454,0,0.156980256395025,0.166211681900156,0.676786981851542,0,0.335643173951685,0.189753732724185,0,0.210998064528027,0.489698424477443,0,0.432777279484182,0,0.530745387020035,0.611030144933625,0,0.741383633679017,0.104421949505455,0.404406797884062,0,0.234264445725339,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| ||
|short_description=p4@TBP | |||
}} | }} |
Latest revision as of 00:14, 17 September 2015
Short description: | p4@TBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TBP_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 114bp_to_L37705_5end |
EntrezGene: | TBP |
HGNC: | 11588 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 9.92e-13 | 1 |
right lung lobe | 9.92e-13 | 1 |
lower lobe of lung | 9.92e-13 | 1 |
lobe of lung | 9.92e-13 | 1 |
right lung | 9.92e-13 | 1 |
cranial nerve II | 1.57e-12 | 1 |
cranial nerve | 1.57e-12 | 1 |
nerve trunk | 1.57e-12 | 1 |
nerve connecting eye with brain | 1.57e-12 | 1 |
nerve | 1.57e-12 | 1 |
retinal neural layer | 1.57e-12 | 1 |
presumptive neural retina | 1.57e-12 | 1 |
epididymis | 3.45e-12 | 1 |
male reproductive organ | 1.16e-09 | 11 |
male organism | 2.88e-08 | 22 |
male reproductive system | 2.88e-08 | 22 |
neural tissue | 6.80e-07 | 2 |
multi cell component structure | 6.80e-07 | 2 |
neuron projection bundle | 6.80e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 6.07e-07 | 2 |
carcinosarcoma | 6.07e-07 | 2 |