FFCP PHASE1:Hg19::chr13:28712827..28712854,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:28712827..28712854,+ to FFCP PHASE1:Hg19::chr13:28712827..28712854,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=255967 | |EntrezGene=255967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29991 | |HGNC=29991 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=184bp_to_ENST00000503791_5end | |||
|cluster_id=chr13:28712827..28712854,+ | |||
|description=CAGE_peak_4_at_PAN3_5end | |||
|id=chr13:28712827..28712854,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.44e-13!140;CL:0000037!5.62e-12!172;CL:0000566!5.62e-12!172;CL:0000988!9.07e-11!182;CL:0002032!5.41e-10!165;CL:0000837!5.41e-10!165;CL:0002087!3.49e-08!119;CL:0002031!4.54e-08!124;CL:0000766!2.85e-07!76;CL:0000763!4.08e-07!112;CL:0000049!4.08e-07!112;CL:0000557!9.52e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.63e-14,136;CL:0000037,1.14e-13,168;CL:0000988,7.29e-13,177;CL:0002032,1.97e-11,161;CL:0000837,1.97e-11,161;CL:0002087,5.80e-09,115;CL:0002031,8.40e-09,120;CL:0000763,8.62e-09,108;CL:0000049,8.62e-09,108;CL:0000766,1.33e-08,72;CL:0000557,7.87e-08,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.65e-12!102;UBERON:0003061!7.65e-12!102;UBERON:0002193!5.74e-11!112;UBERON:0002371!2.64e-07!80;UBERON:0001474!5.19e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;9.67e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.53e-13,98;UBERON:0003061,2.53e-13,98;UBERON:0002193,2.78e-12,108;UBERON:0002405,1.73e-08,93;UBERON:0002371,2.03e-08,76;UBERON:0001474,9.93e-08,82 | |||
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| ||
|short_description=p4@PAN3 | |||
}} | }} |
Latest revision as of 23:59, 16 September 2015
Short description: | p4@PAN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PAN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 184bp_to_ENST00000503791_5end |
EntrezGene: | PAN3 |
HGNC: | 29991 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.63e-14 | 136 |
hematopoietic stem cell | 1.14e-13 | 168 |
hematopoietic cell | 7.29e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.97e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.97e-11 | 161 |
nongranular leukocyte | 5.80e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.40e-09 | 120 |
myeloid cell | 8.62e-09 | 108 |
common myeloid progenitor | 8.62e-09 | 108 |
myeloid leukocyte | 1.33e-08 | 72 |
granulocyte monocyte progenitor cell | 7.87e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.53e-13 | 98 |
blood island | 2.53e-13 | 98 |
hemolymphoid system | 2.78e-12 | 108 |
immune system | 1.73e-08 | 93 |
bone marrow | 2.03e-08 | 76 |
bone element | 9.93e-08 | 82 |