FFCP PHASE1:Hg19::chr7:144533074..144533153,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27010 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17358 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H3S4,F8WCM7,F5GZG6 | |||
|association_with_transcript=0bp_to_ENST00000360057,ENST00000378098,ENST00000378099,ENST00000548460,NM_001042482,NM_022445,uc003weq.2,uc003wer.2,uc003wes.2_5end | |||
|cluster_id=chr7:144533074..144533153,- | |||
|coexpression_cluster_id=C2578 | |||
|description=CAGE_peak_1_at_TPK1_5end | |||
|id=chr7:144533074..144533153,- | |||
|ontology_enrichment_celltype=CL:0000738!5.57e-50!140;CL:0000037!8.21e-45!172;CL:0000566!8.21e-45!172;CL:0000988!7.03e-44!182;CL:0002032!9.31e-43!165;CL:0000837!9.31e-43!165;CL:0002087!7.24e-42!119;CL:0002031!1.46e-40!124;CL:0000766!1.14e-29!76;CL:0000557!1.78e-25!71;CL:0000763!5.22e-25!112;CL:0000049!5.22e-25!112;CL:0002009!5.01e-24!65;CL:0002194!1.42e-23!63;CL:0000576!1.42e-23!63;CL:0000040!1.42e-23!63;CL:0000559!1.42e-23!63;CL:0000839!2.03e-23!70;CL:0002057!1.78e-20!42;CL:0000860!4.84e-19!45;CL:0000542!4.56e-16!53;CL:0000051!4.56e-16!53;CL:0000838!8.30e-16!52;CL:0000084!5.95e-10!25;CL:0000827!5.95e-10!25;CL:0000791!3.37e-09!18;CL:0000789!3.37e-09!18;CL:0002420!3.37e-09!18;CL:0002419!3.37e-09!18;CL:0000790!3.37e-09!18;CL:0000134!1.98e-07!358;CL:0000236!3.05e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000576;5.57e-15;48!CL:0000860;3.01e-14;33!CL:0002057;3.01e-14;33!CL:0000473;3.17e-14;39!CL:0000234;3.17e-14;39!CL:0000766;1.45e-13;69!CL:0002087;3.39e-12;104!CL:0000738;1.22e-11;136!CL:0000084;4.46e-10;25!CL:0000542;7.56e-10;53!CL:0000791;2.50e-09;18!CL:0000789;2.50e-09;18!CL:0002419;2.50e-09;18!CL:0000988;3.57e-08;177!CL:0000763;3.59e-08;100!CL:0000236;3.28e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.67e-52,136;CL:0000037,1.18e-46,168;CL:0000988,2.02e-45,177;CL:0002032,1.34e-44,161;CL:0000837,1.34e-44,161;CL:0002087,3.47e-44,115;CL:0002031,9.51e-43,120;CL:0000766,3.05e-32,72;CL:0000557,6.96e-28,67;CL:0000763,1.10e-26,108;CL:0000049,1.10e-26,108;CL:0002009,1.68e-26,61;CL:0002194,4.48e-26,59;CL:0000576,4.48e-26,59;CL:0000040,4.48e-26,59;CL:0000559,4.48e-26,59;CL:0000839,1.07e-25,66;CL:0000473,4.91e-23,48;CL:0000234,4.91e-23,48;CL:0000860,1.76e-20,42;CL:0002057,1.76e-20,42;CL:0000542,4.51e-16,53;CL:0000051,4.51e-16,53;CL:0000838,8.22e-16,52;CL:0000084,5.92e-10,25;CL:0000827,5.92e-10,25;CL:0000791,3.35e-09,18;CL:0000789,3.35e-09,18;CL:0002420,3.35e-09,18;CL:0002419,3.35e-09,18;CL:0000790,3.35e-09,18;CL:0000134,1.88e-07,354;CL:0000236,3.04e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;7.33e-15;42!CL:0000051;7.56e-10;53!CL:0000790;2.50e-09;18!CL:0000049;4.65e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.51e-33!112;UBERON:0002390!8.58e-32!102;UBERON:0003061!8.58e-32!102;UBERON:0002371!8.29e-24!80;UBERON:0001474!3.04e-21!86;UBERON:0002405!1.26e-16!115;UBERON:0004765!9.69e-16!101;UBERON:0001434!9.69e-16!101;UBERON:0007023!5.21e-11!115;UBERON:0003081!1.38e-09!216;UBERON:0000178!1.54e-07!15;UBERON:0000179!1.54e-07!15;UBERON:0000463!1.54e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.47e-07;15!UBERON:0000179;1.47e-07;15!UBERON:0000463;1.47e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.10e-35,108;UBERON:0002390,6.44e-34,98;UBERON:0003061,6.44e-34,98;UBERON:0002405,3.35e-28,93;UBERON:0002371,7.16e-26,76;UBERON:0001474,5.25e-23,82;UBERON:0004765,1.07e-18,90;UBERON:0001434,3.31e-15,100;UBERON:0003081,1.63e-12,203;UBERON:0007023,5.62e-11,114;UBERON:0000178,1.53e-07,15;UBERON:0000179,1.53e-07,15;UBERON:0000463,1.53e-07,15 | |||
|phase1_expression=4.54195948176392,3.42560838225573,3.94672331468719,2.00146596706261,1.34088328328186,3.48935409640147,2.53299878168311,2.52687949370732,2.61185628199839,1.72013755551056,0,2.18441372130172,2.37390280405608,1.36142988256051,1.65698687863958,0,0.602694528023977,2.19093027116212,0.975865597581014,3.0780264519197,3.06001036866379,0.940364164434263,2.0036519099174,2.32686522623903,2.88748071068046,12.2261449196722,11.8224848807922,12.3575926662476,18.0947567350496,16.5046641181801,17.4942219347166,0.919421224478927,3.614471025339,2.21852406100073,4.8029664359787,3.12772311472327,16.4416246027514,20.4978301156795,17.2468224824322,18.8799457522791,26.8698569087909,25.2637059494804,27.560585736858,17.5931868923273,19.2716731281293,19.1641408338375,18.5943229524548,14.8020439687857,17.6532631410209,22.7276989934499,21.5174993484445,47.5329282076056,17.5820297175675,17.4280864567633,32.502356782642,14.4946601447806,18.5576182039335,24.9443067734044,19.8954530041087,21.1813157870222,31.327519164153,18.8015241106428,17.9517291859469,25.5734850319616,15.381089647315,12.4824749432051,18.6846674698673,23.3661258688771,25.0311800841697,37.7908589786903,11.502590550034,20.6235476153036,31.6462387440884,43.9410995528839,42.3082556930437,41.3027531651501,39.4273495324198,36.793338746169,41.3064757811496,39.6167713800335,47.9389192049807,53.1552687455085,54.55883578301,39.3219800108735,40.9174256777235,39.2591804761187,46.8463304832135,39.0831659169049,40.9847821126614,41.978365199556,47.8138894051937,35.8214685516273,39.7564157250238,23.7908391442247,12.8916969485753,6.847986204152,25.1788505745706,24.3666672904482,27.9618038639333,45.4747267462644,29.6589262636567,32.1944507899619,37.0170783975031,26.5156887386713,27.9875612101095,31.4578130308742,41.4329911560474,30.6138254144364,40.578516438682,19.5681106478375,37.3072524010895,31.8783394308558,28.4710201271156,38.5258792449187,42.8595647600405,29.1205010732745,34.4898444241729,30.2392152024714,49.0858202517836,23.2552752456591,21.4857539772618,27.5631092890028,29.6632984583212,27.3891347870455,37.4792179657038,26.5190522289299,26.2760959014735,18.3462136334507,14.4417705723094,19.4064701202951,2.43806866313962,2.68280343881454,3.06870148424473,9.75885711438329,2.50668955317945,2.462390822334,6.36228757640879,0.486634870302636,4.44313640671119,2.4390233720882,5.27008714158756,7.33482822787191,0.728590576585084,1.85392221392215,34.7265711210511,34.3035582479556,31.7769525640088,10.493587469435,15.4438625910635,10.7722675385574,5.96287222100115,5.16140757063675,4.51282652089873,3.39184765154406,8.80948816040802,7.15306909044175,9.61376846069329,13.6960882359744,23.1248070746362,12.7193832850575,11.2792208790561,20.5273468543998,4.39311703586705,10.6622293300302,4.0507097394088,7.9476758172831,5.38870494302808,6.19363142658272,9.19899824795299,2.84779697870439,2.74802615895611,54.0299711487859,58.1670396222488,0.872188104285069,2.98183171017191,4.43206790826029,10.5927344650575,8.3182620017156,5.67469411517371,3.36406560085384,0,2.71334303258876,6.53543174339509,9.42974704487816,6.70193802765181,3.02714855289863,4.60940739583999,2.34321431833797,0.936480230490962,2.2818872861778,1.34503812496621,2.58355897016283,3.56120477609889,4.49442581447195,7.14539599392126,4.17636678860011,2.9964476540972,2.37600571456411,0.741800787835671,0.910161361938026,0.718618141816238,3.87173062094352,2.87772595705518,4.43302584774693,1.75591048352335,2.45190236639216,1.35214253015937,4.53728732640084,3.04962380671065,1.49490172172997,2.96704661623387,2.10063767259082,1.64884046781502,3.09168648054755,2.79175284497385,2.19409231913646,2.63079913935236,3.78650661366172,2.20919756741518,2.58633690910099,1.42003837006646,2.92181084860157,2.54340888465731,2.51239109112286,4.36393792945335,1.43402297694502,1.21973706129595,1.06023814657188,2.09149097165133,1.34759371519982,0.756962552626885,2.18986415445498,1.56449532329816,1.28648187638577,0,0.464367928031979,1.44375896333917,3.785817601275,3.20310911148393,2.16909926895134,3.41911315470421,2.39667388501647,4.03360052488864,3.23595139584395,5.101758093259,3.8474715694639,1.4763109092493,1.40241773803446,2.8810180793198,0,5.07020139287323,8.84544495009863,7.68026878685825,2.20731549707325,18.3252773429239,1.71567810298526,1.42675371031213,1.1240175325762,1.60846355858609,2.4998880192803,2.28065813717227,3.11980435583874,1.44331342025273,1.507095264676,2.46558257895225,27.8627244178872,14.8155364024515,14.4593155698295,3.1608175918371,5.15091697256924,31.2695597730995,24.57044783962,22.443305505598,5.62403003920662,5.54341023056236,3.54437743105966,0.895585227028483,1.45316969256981,0,8.37527504423104,9.06898870336228,21.1474677851587,34.3005489132368,14.6441222774601,4.95283575478919,3.05590740446622,3.51652341630141,1.71072446022705,2.57068731758309,1.8020583470635,4.0015700568281,5.27016096423195,2.61576041299968,5.4270331507503,4.00742318849111,3.57656445851882,4.22651376278,3.72313363218819,4.16029747645464,3.85811061393213,4.25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| |||
|short_description=p1@TPK1 | |||
}} |
Latest revision as of 23:54, 16 September 2015
Short description: | p1@TPK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TPK1_5end |
Coexpression cluster: | C2578_Eosinophils_CD14_CD19_Neutrophils_CD4_Whole_CD14CD16 |
Association with transcript: | 0bp_to_ENST00000360057, ENST00000378098, ENST00000378099, ENST00000548460, NM_001042482, NM_022445, uc003weq.2, uc003wer.2, uc003wes.2_5end |
EntrezGene: | TPK1 |
HGNC: | 17358 |
UniProt: | Q9H3S4F8WCM7F5GZG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.10e-35 | 108 |
hematopoietic system | 6.44e-34 | 98 |
blood island | 6.44e-34 | 98 |
immune system | 3.35e-28 | 93 |
bone marrow | 7.16e-26 | 76 |
bone element | 5.25e-23 | 82 |
skeletal element | 1.07e-18 | 90 |
skeletal system | 3.31e-15 | 100 |
lateral plate mesoderm | 1.63e-12 | 203 |
adult organism | 5.62e-11 | 114 |
blood | 1.53e-07 | 15 |
haemolymphatic fluid | 1.53e-07 | 15 |
organism substance | 1.53e-07 | 15 |