FFCP PHASE1:Hg19::chr13:28712299..28712376,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:28712299..28712376,+
|short_description=p1@PAN3
|description=CAGE_peak_1_at_PAN3_5end
|association_with_transcript=-266bp_to_ENST00000380958,ENST000005037...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=255967 | |EntrezGene=255967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29991 | |HGNC=29991 | ||
|TSSclassifier=strong | |||
|UniProt=Q58A45 | |UniProt=Q58A45 | ||
|association_with_transcript=-266bp_to_ENST00000380958,ENST00000503791,NM_175854,uc010tdo.1_5end | |||
|cluster_id=chr13:28712299..28712376,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_PAN3_5end | |||
|id=chr13:28712299..28712376,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.01e-46!172;CL:0000566!4.01e-46!172;CL:0000738!2.14e-43!140;CL:0002032!2.56e-42!165;CL:0000837!2.56e-42!165;CL:0000988!1.26e-40!182;CL:0002031!1.41e-34!124;CL:0002087!2.65e-32!119;CL:0000763!2.79e-26!112;CL:0000049!2.79e-26!112;CL:0000766!3.07e-22!76;CL:0000557!1.94e-19!71;CL:0002057!1.18e-18!42;CL:0000839!1.30e-18!70;CL:0000860!2.70e-17!45;CL:0002009!3.87e-17!65;CL:0002194!4.58e-16!63;CL:0000576!4.58e-16!63;CL:0000040!4.58e-16!63;CL:0000559!4.58e-16!63;CL:0000838!2.30e-14!52;CL:0000542!2.65e-14!53;CL:0000051!2.65e-14!53;CL:0000791!3.39e-08!18;CL:0000789!3.39e-08!18;CL:0002420!3.39e-08!18;CL:0002419!3.39e-08!18;CL:0000790!3.39e-08!18;CL:0000945!1.53e-07!24;CL:0000826!1.53e-07!24;CL:0000236!4.59e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.01e-14;33!CL:0002057;8.01e-14;33!CL:0000576;1.13e-12;48!CL:0002087;5.42e-11;104!CL:0000473;1.26e-10;39!CL:0000234;1.26e-10;39!CL:0000766;1.94e-10;69!CL:0000738;5.71e-10;136!CL:0000542;4.06e-09;53!CL:0000791;3.25e-08;18!CL:0000789;3.25e-08;18!CL:0002419;3.25e-08;18!CL:0000988;6.78e-08;177!CL:0000763;7.06e-08;100!CL:0000945;1.20e-07;24!CL:0000236;2.67e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.52e-47,168;CL:0000738,4.84e-45,136;CL:0002032,1.07e-43,161;CL:0000837,1.07e-43,161;CL:0000988,9.20e-43,177;CL:0002031,4.20e-36,120;CL:0002087,8.48e-34,115;CL:0000763,1.31e-27,108;CL:0000049,1.31e-27,108;CL:0000766,7.14e-24,72;CL:0000557,5.53e-21,67;CL:0000839,4.05e-20,66;CL:0000860,1.18e-18,42;CL:0002057,1.18e-18,42;CL:0002009,1.24e-18,61;CL:0002194,1.62e-17,59;CL:0000576,1.62e-17,59;CL:0000040,1.62e-17,59;CL:0000559,1.62e-17,59;CL:0000473,4.08e-17,48;CL:0000234,4.08e-17,48;CL:0000838,2.30e-14,52;CL:0000542,2.65e-14,53;CL:0000051,2.65e-14,53;CL:0000791,3.39e-08,18;CL:0000789,3.39e-08,18;CL:0002420,3.39e-08,18;CL:0002419,3.39e-08,18;CL:0000790,3.39e-08,18;CL:0000945,1.53e-07,24;CL:0000826,1.53e-07,24;CL:0000236,4.59e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-13;42!CL:0000051;4.06e-09;53!CL:0000790;3.25e-08;18!CL:0000049;4.64e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.31e-23!102;UBERON:0003061!3.31e-23!102;UBERON:0007023!1.90e-21!115;UBERON:0002193!1.91e-20!112;UBERON:0002371!1.53e-15!80;UBERON:0001474!3.56e-14!86;UBERON:0002405!2.33e-12!115;UBERON:0004765!5.19e-10!101;UBERON:0001434!5.19e-10!101;UBERON:0001049!2.35e-07!57;UBERON:0005068!2.35e-07!57;UBERON:0006241!2.35e-07!57;UBERON:0007135!2.35e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;9.91e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.66e-24,98;UBERON:0003061,1.66e-24,98;UBERON:0002193,1.61e-21,108;UBERON:0007023,3.83e-21,114;UBERON:0002371,1.10e-16,76;UBERON:0002405,1.20e-16,93;UBERON:0001474,3.63e-15,82;UBERON:0004765,3.61e-11,90;UBERON:0001434,1.54e-09,100;UBERON:0001049,3.57e-07,56;UBERON:0005068,3.57e-07,56;UBERON:0006241,3.57e-07,56;UBERON:0007135,3.57e-07,56;UBERON:0000073,8.01e-07,53;UBERON:0002616,8.01e-07,53 | |||
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| ||
|short_description=p1@PAN3 | |||
}} | }} |
Latest revision as of 23:53, 16 September 2015
Short description: | p1@PAN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAN3_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | -266bp_to_ENST00000380958, ENST00000503791, NM_175854, uc010tdo.1_5end |
EntrezGene: | PAN3 |
HGNC: | 29991 |
UniProt: | Q58A45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.66e-24 | 98 |
blood island | 1.66e-24 | 98 |
hemolymphoid system | 1.61e-21 | 108 |
adult organism | 3.83e-21 | 114 |
bone marrow | 1.10e-16 | 76 |
immune system | 1.20e-16 | 93 |
bone element | 3.63e-15 | 82 |
skeletal element | 3.61e-11 | 90 |
skeletal system | 1.54e-09 | 100 |
neural tube | 3.57e-07 | 56 |
neural rod | 3.57e-07 | 56 |
future spinal cord | 3.57e-07 | 56 |
neural keel | 3.57e-07 | 56 |
regional part of nervous system | 8.01e-07 | 53 |
regional part of brain | 8.01e-07 | 53 |