FFCP PHASE1:Hg19::chr8:145018310..145018328,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5339 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9069 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-184bp_to_ENST00000354589_5end | |||
|cluster_id=chr8:145018310..145018328,- | |||
|description=CAGE_peak_15_at_PLEC_5end | |||
|id=chr8:145018310..145018328,- | |||
|ontology_enrichment_celltype=CL:0000055!1.78e-26!180;CL:0000057!6.86e-18!75;CL:0000548!8.48e-13!679;CL:0000004!8.48e-13!679;CL:0000255!8.48e-13!679;CL:0000012!5.04e-12!682;CL:0000144!1.02e-11!625;CL:0002371!1.16e-11!591;CL:0002620!2.61e-09!23;CL:0000183!6.73e-09!59;CL:0000222!8.11e-09!119;CL:0000680!2.48e-08!57;CL:0000056!2.48e-08!57;CL:0000355!2.48e-08!57;CL:0000187!1.98e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.28e-10;23!CL:0000057;1.10e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.70e-20,76;CL:0002620,5.10e-10,23;CL:0000222,3.58e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.55e-13!83;UBERON:0002329!4.55e-13!83;UBERON:0003077!4.55e-13!83;UBERON:0003059!4.55e-13!83;UBERON:0007282!4.55e-13!83;UBERON:0009618!4.55e-13!83;UBERON:0007285!4.55e-13!83;UBERON:0005256!1.68e-11!143;UBERON:0004290!2.19e-11!70;UBERON:0000926!9.29e-11!448;UBERON:0004120!9.29e-11!448;UBERON:0006603!9.29e-11!448;UBERON:0000486!1.32e-10!82;UBERON:0002100!3.36e-10!216;UBERON:0001134!1.03e-09!61;UBERON:0002036!1.03e-09!61;UBERON:0003082!1.03e-09!61;UBERON:0002385!2.83e-09!63;UBERON:0001015!2.83e-09!63;UBERON:0000383!2.83e-09!63;UBERON:0003104!3.04e-08!238;UBERON:0009142!3.04e-08!238;UBERON:0000468!4.92e-08!659;UBERON:0002204!2.30e-07!167;UBERON:0000475!4.63e-07!365;UBERON:0000480!8.03e-07!626;UBERON:0000467!9.24e-07!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.73e-11,78;UBERON:0002329,6.44e-10,71;UBERON:0003059,6.44e-10,71;UBERON:0007282,6.44e-10,71;UBERON:0004290,6.44e-10,71;UBERON:0009618,6.44e-10,71;UBERON:0003077,1.32e-09,72;UBERON:0007285,1.32e-09,72;UBERON:0000486,1.49e-09,83;UBERON:0007524,2.65e-09,73;UBERON:0002100,5.72e-08,199;UBERON:0001134,5.74e-08,62;UBERON:0002036,5.74e-08,62;UBERON:0003082,5.74e-08,62;UBERON:0003104,1.08e-07,160;UBERON:0009142,1.08e-07,160;UBERON:0002385,2.10e-07,64;UBERON:0001015,2.10e-07,64;UBERON:0000383,2.10e-07,64;UBERON:0005256,9.94e-07,122 | |||
|phase1_expression=0.726713517082227,1.71280419112787,0.422863212287913,1.0007329835313,0,1.74467704820074,0,1.26343974685366,0,2.21160542851358,3.48900583986214,0.436882744260345,0.527533956456907,2.22779435328084,3.97676850873499,0.672325146451775,0,0,0.975865597581014,5.29420549730188,6.73202281106035,5.01527554364941,0.85870796139317,0.958120975510189,0.502170558379211,0,0,0,0,0,0.154816123316076,1.83884244895785,0.30120591877825,2.58827807116751,0,0,0.587200878669695,0.553995408531877,0,0.434021741431704,0,0,0.257575567634187,1.30858414901608,1.88937971844405,0.970336244751265,0.929716147622738,1.23350366406548,1.54853185447552,0.575384784644301,0.512321413058201,0.236482229888585,0,0,1.35426486594342,1.69418105588344,0.545812300115692,0.898893937780338,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0.426224750532694,0.580418477257168,0,0,0,0,0.65156653411535,0,0.368277635987565,0.632924774881769,0,0.425208599930087,0.419317291016752,0.673971786878971,0.450530678524519,0.32145117339416,0.855038231223746,0,0.365328307529268,0,1.09227722252426,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0.651083453856419,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0.639312809217652,1.80719576192283,4.01070328508712,2.17269778441236,0.795285947051099,1.45990461090791,0.661743720148475,1.55210578223795,1.58102614247627,0.261958150995425,1.09288586487763,1.85392221392215,1.62273696827342,1.56716763569341,0.797747763113191,0,0,0,2.98143611050058,0.860234595106124,1.38856200643038,1.13061588384802,0,0.825354125820202,0.208994966536811,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0.488124115096339,1.47065232138347,0,0.446498641420399,0.44905874525234,0.675668882899933,1.53316637465883,1.89853131913626,0.549605231791222,0,0,0.872188104285069,2.48485975847659,1.01304409331664,3.31022952033047,11.1866282092037,1.77334191099179,2.80338800071154,1.06748995729705,2.4666754841716,0.933633106199299,0.269421344139376,0.653847612453835,2.4217188423189,2.30470369792,2.10889288650417,2.80944069147288,4.56377457235559,1.79338416662161,1.05691048779388,1.13311061057692,0.98315564691574,4.69554593886255,3.93069815397658,3.51307655997603,0,0.494533858557114,0.910161361938026,2.15585442544872,4.71341119071385,2.50237039743928,2.49357703935765,2.63386572528503,1.5324389789951,1.65261864797256,0.794025282120147,10.0458195985763,1.06778694409284,1.27159140695737,16.5050102846421,2.88547081867629,12.1091053821446,4.09457083929498,9.78902726999344,1.85130309806277,15.398460228891,0.920498986422993,0.323292113637624,5.68015348026583,2.21654616100809,1.86516651541536,0.386521706326594,2.18196896472668,1.14721838155602,0.365921118388786,0.132529768321485,0.232387885739037,0.310983165046111,0.756962552626885,0,1.56449532329816,1.92972281457866,0,0.464367928031979,2.16563844500876,0.473227200159376,0.337169380156203,0.241011029883482,0.220587945464788,0,0.71181185733329,0.404493924480493,0,0,0.738155454624648,1.40241773803446,0.8231480226628,1.47008711385542,1.26755034821831,0,0,0,0.122988438543114,2.05881372358231,1.86575485194663,1.1240175325762,0.201057944823262,0.185176890317059,0.651616610620649,9.35941306751621,1.44331342025273,0.231860809950154,0.234817388471643,0.288732895522148,0,0.190254152234598,0.790204397959275,0,0,0.468008530278475,1.0404181360211,0,0.335964256397719,0.425325291727159,0.268675568108545,0.581267877027924,3.06706143332169,0,0,0.207328115540772,0.144119953416961,0.50496973370552,0.380987365753014,1.14596527667483,0,1.71072446022705,1.13110241973656,0.600686115687835,0,2.5790149399433,0.43596006883328,1.83345714552375,0.904902010304444,0,0.845302752556,0,1.04007436911366,1.28603687131071,4.25547396069835,1.5985330740966,0.428933980974443,1.08524321078289,0,0.977208552881205,0,2.37585561880029,0.904318131178758,0,0.699810938274399,0,0.502257091432126,0,1.19812427745791,0,4.27910715122155,2.75084482668401,2.26023954805422,1.25342674267927,0,0.197030760201927,0,0,0.254094624222463,0,0,0,0,0,0,0,1.59498939234882,2.50085260529839,2.44138521329762,0.415941723061614,0.892144943985809,0.473107245101804,1.28855556491985,3.31040709700491,4.5481500811197,2.0694614258501,0,1.47495334833363,2.60650843404249,2.15381273209015,3.0882908142977,0,0.431428401637234,0.213455115606889,0,1.66435439510497,0.604780586659361,0.992431231275107,2.60885354589706,1.12264037773229,1.02511319404561,2.55853624533352,2.57366273829772,0,0.308419387605311,0.532685175939381,2.05317890034523,2.59627214591811,2.5566283261191,0,0.40101294060657,0,1.26295892981067,0.364182336013434,0,1.35359883872224,0.924184045252977,5.49044838423799,2.92278449306521,0.527758144464379,0,1.36074964221213,0.431831832204279,1.54227252690289,2.98041081298238,1.00337954770971,2.03901018436031,3.3243040357149,2.46262230194396,0,0,0.769350375349168,1.64007322849853,0.325378394664303,0.206082023295445,2.7470839445503,3.21787049690293,0,0,4.820517895324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| |||
|short_description=p15@PLEC | |||
}} |
Latest revision as of 23:49, 16 September 2015
Short description: | p15@PLEC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PLEC_5end |
Coexpression cluster: | NA |
Association with transcript: | -184bp_to_ENST00000354589_5end |
EntrezGene: | PLEC |
HGNC: | 9069 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.70e-20 | 76 |
skin fibroblast | 5.10e-10 | 23 |
mesodermal cell | 3.58e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 3.73e-11 | 78 |
somite | 6.44e-10 | 71 |
presomitic mesoderm | 6.44e-10 | 71 |
presumptive segmental plate | 6.44e-10 | 71 |
dermomyotome | 6.44e-10 | 71 |
trunk paraxial mesoderm | 6.44e-10 | 71 |
paraxial mesoderm | 1.32e-09 | 72 |
presumptive paraxial mesoderm | 1.32e-09 | 72 |
multilaminar epithelium | 1.49e-09 | 83 |
dense mesenchyme tissue | 2.65e-09 | 73 |
trunk | 5.72e-08 | 199 |
skeletal muscle tissue | 5.74e-08 | 62 |
striated muscle tissue | 5.74e-08 | 62 |
myotome | 5.74e-08 | 62 |
mesenchyme | 1.08e-07 | 160 |
entire embryonic mesenchyme | 1.08e-07 | 160 |
muscle tissue | 2.10e-07 | 64 |
musculature | 2.10e-07 | 64 |
musculature of body | 2.10e-07 | 64 |
trunk mesenchyme | 9.94e-07 | 122 |