FFCP PHASE1:Hg19::chr3:182971220..182971227,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84002 | |EntrezGene=84002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15684 | |HGNC=15684 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=79bp_to_ENST00000480551_5end | |association_with_transcript=79bp_to_ENST00000480551_5end | ||
|cluster_id=chr3:182971220..182971227,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_28_at_B3GNT5_5end | |description=CAGE_peak_28_at_B3GNT5_5end | ||
|id=chr3:182971220..182971227,+ | |id=chr3:182971220..182971227,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.08e-32!42;CL:0000860!4.24e-30!45;CL:0000557!2.76e-26!71;CL:0002009!1.00e-24!65;CL:0000839!1.65e-24!70;CL:0000766!4.33e-24!76;CL:0002194!2.09e-23!63;CL:0000576!2.09e-23!63;CL:0000040!2.09e-23!63;CL:0000559!2.09e-23!63;CL:0000763!7.72e-17!112;CL:0000049!7.72e-17!112;CL:0002031!4.31e-12!124;CL:0000738!5.68e-11!140;CL:0002087!1.48e-09!119;CL:0002032!4.09e-09!165;CL:0000837!4.09e-09!165;CL:0000037!1.83e-08!172;CL:0000566!1.83e-08!172;CL:0000988!1.25e-07!182 | |ontology_enrichment_celltype=CL:0002057!1.08e-32!42;CL:0000860!4.24e-30!45;CL:0000557!2.76e-26!71;CL:0002009!1.00e-24!65;CL:0000839!1.65e-24!70;CL:0000766!4.33e-24!76;CL:0002194!2.09e-23!63;CL:0000576!2.09e-23!63;CL:0000040!2.09e-23!63;CL:0000559!2.09e-23!63;CL:0000763!7.72e-17!112;CL:0000049!7.72e-17!112;CL:0002031!4.31e-12!124;CL:0000738!5.68e-11!140;CL:0002087!1.48e-09!119;CL:0002032!4.09e-09!165;CL:0000837!4.09e-09!165;CL:0000037!1.83e-08!172;CL:0000566!1.83e-08!172;CL:0000988!1.25e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.95e-51;33!CL:0002057;3.95e-51;33!CL:0000473;3.30e-35;39!CL:0000234;3.30e-35;39!CL:0000576;4.37e-26;48!CL:0000766;3.78e-15;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.10e-42,42;CL:0002057,5.10e-42,42;CL:0000473,1.02e-36,48;CL:0000234,1.02e-36,48;CL:0000839,7.93e-32,66;CL:0000557,2.37e-31,67;CL:0002194,2.73e-29,59;CL:0000576,2.73e-29,59;CL:0000040,2.73e-29,59;CL:0000559,2.73e-29,59;CL:0000766,3.58e-29,72;CL:0002009,2.48e-28,61;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0002031,2.20e-17,120;CL:0000738,2.78e-15,136;CL:0002087,6.87e-15,115;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.93e-31;42!CL:0000049;2.71e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.54e-22!80;UBERON:0004765!5.86e-21!101;UBERON:0001434!5.86e-21!101;UBERON:0001474!1.78e-20!86;UBERON:0002390!3.58e-16!102;UBERON:0003061!3.58e-16!102;UBERON:0002193!4.10e-14!112;UBERON:0002405!1.44e-13!115;UBERON:0002204!1.40e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.24e-27,76;UBERON:0001474,1.34e-25,82;UBERON:0004765,2.65e-23,90;UBERON:0002405,1.53e-22,93;UBERON:0002390,2.24e-21,98;UBERON:0003061,2.24e-21,98;UBERON:0001434,6.08e-21,100;UBERON:0002193,2.30e-19,108;UBERON:0002204,2.44e-12,167;UBERON:0003081,4.95e-10,203 | |||
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| ||
|short_description=p28@B3GNT5 | |short_description=p28@B3GNT5 | ||
}} | }} |
Latest revision as of 23:43, 16 September 2015
Short description: | p28@B3GNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_B3GNT5_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 79bp_to_ENST00000480551_5end |
EntrezGene: | B3GNT5 |
HGNC: | 15684 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.10e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.10e-42 | 42 |
defensive cell | 1.02e-36 | 48 |
phagocyte | 1.02e-36 | 48 |
myeloid lineage restricted progenitor cell | 7.93e-32 | 66 |
granulocyte monocyte progenitor cell | 2.37e-31 | 67 |
monopoietic cell | 2.73e-29 | 59 |
monocyte | 2.73e-29 | 59 |
monoblast | 2.73e-29 | 59 |
promonocyte | 2.73e-29 | 59 |
myeloid leukocyte | 3.58e-29 | 72 |
macrophage dendritic cell progenitor | 2.48e-28 | 61 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
hematopoietic lineage restricted progenitor cell | 2.20e-17 | 120 |
leukocyte | 2.78e-15 | 136 |
nongranular leukocyte | 6.87e-15 | 115 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.24e-27 | 76 |
bone element | 1.34e-25 | 82 |
skeletal element | 2.65e-23 | 90 |
immune system | 1.53e-22 | 93 |
hematopoietic system | 2.24e-21 | 98 |
blood island | 2.24e-21 | 98 |
skeletal system | 6.08e-21 | 100 |
hemolymphoid system | 2.30e-19 | 108 |
musculoskeletal system | 2.44e-12 | 167 |
lateral plate mesoderm | 4.95e-10 | 203 |