FFCP PHASE1:Hg19::chr8:145013711..145013786,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:145013711..145013786,-
|short_description=p1@PLEC
|description=CAGE_peak_1_at_PLEC_5end
|association_with_transcript=0bp_to_ENST00000345136,NM_201384,uc003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5339 | |EntrezGene=5339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9069 | |HGNC=9069 | ||
|TSSclassifier=strong | |||
|UniProt=Q15149 | |UniProt=Q15149 | ||
|association_with_transcript=0bp_to_ENST00000345136,NM_201384,uc003zab.1_5end | |||
|cluster_id=chr8:145013711..145013786,- | |||
|description=CAGE_peak_1_at_PLEC_5end | |||
|id=chr8:145013711..145013786,- | |||
|ontology_enrichment_celltype=CL:0000548!1.82e-27!679;CL:0000004!1.82e-27!679;CL:0000255!1.82e-27!679;CL:0000012!4.27e-27!682;CL:0000063!1.22e-26!578;CL:0000003!9.11e-23!722;CL:0000144!4.98e-22!625;CL:0002371!2.64e-21!591;CL:0000066!1.82e-13!254;CL:0002057!3.15e-13!42;CL:0000860!9.77e-13!45;CL:0002076!1.54e-11!43;CL:0002009!7.36e-10!65;CL:0000076!3.89e-09!62;CL:0002194!4.00e-09!63;CL:0000576!4.00e-09!63;CL:0000040!4.00e-09!63;CL:0000559!4.00e-09!63;CL:0002368!8.93e-08!13;CL:0000557!1.62e-07!71;CL:0000766!3.02e-07!76;CL:0000057!5.05e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.04e-13;33!CL:0002057;2.04e-13;33!CL:0000473;9.97e-10;39!CL:0000234;9.97e-10;39!CL:0002076;2.02e-08;42!CL:0002368;8.96e-08;13!CL:0000576;1.43e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.03e-13,253;CL:0000860,3.12e-13,42;CL:0002057,3.12e-13,42;CL:0000473,8.27e-12,48;CL:0000234,8.27e-12,48;CL:0002076,4.55e-11,42;CL:0002009,7.78e-10,61;CL:0000076,1.36e-09,63;CL:0002194,4.35e-09,59;CL:0000576,4.35e-09,59;CL:0000040,4.35e-09,59;CL:0000559,4.35e-09,59;CL:0002368,8.88e-08,13;CL:0000557,2.01e-07,67;CL:0000057,3.02e-07,76;CL:0000766,3.88e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;4.31e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.80e-09!448;UBERON:0004120!4.80e-09!448;UBERON:0006603!4.80e-09!448;UBERON:0004765!2.21e-08!101;UBERON:0001434!2.21e-08!101;UBERON:0003102!6.73e-08!95;UBERON:0002371!1.37e-07!80;UBERON:0001474!3.24e-07!86;UBERON:0003081!3.70e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,2.57e-09,90;UBERON:0003102,5.18e-09,99;UBERON:0001434,5.42e-09,100;UBERON:0002371,1.86e-07,76;UBERON:0001474,4.35e-07,82;UBERON:0002204,6.88e-07,167 | |||
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| ||
|short_description=p1@PLEC | |||
}} | }} |
Latest revision as of 23:43, 16 September 2015
Short description: | p1@PLEC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLEC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000345136, NM_201384, uc003zab.1_5end |
EntrezGene: | PLEC |
HGNC: | 9069 |
UniProt: | Q15149 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.03e-13 | 253 |
classical monocyte | 3.12e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.12e-13 | 42 |
defensive cell | 8.27e-12 | 48 |
phagocyte | 8.27e-12 | 48 |
endo-epithelial cell | 4.55e-11 | 42 |
macrophage dendritic cell progenitor | 7.78e-10 | 61 |
squamous epithelial cell | 1.36e-09 | 63 |
monopoietic cell | 4.35e-09 | 59 |
monocyte | 4.35e-09 | 59 |
monoblast | 4.35e-09 | 59 |
promonocyte | 4.35e-09 | 59 |
respiratory epithelial cell | 8.88e-08 | 13 |
granulocyte monocyte progenitor cell | 2.01e-07 | 67 |
fibroblast | 3.02e-07 | 76 |
myeloid leukocyte | 3.88e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 2.57e-09 | 90 |
surface structure | 5.18e-09 | 99 |
skeletal system | 5.42e-09 | 100 |
bone marrow | 1.86e-07 | 76 |
bone element | 4.35e-07 | 82 |
musculoskeletal system | 6.88e-07 | 167 |