FFCP PHASE1:Hg19::chr3:182971089..182971100,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84002 | |EntrezGene=84002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15684 | |HGNC=15684 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000493370_5end | |association_with_transcript=18bp_to_ENST00000493370_5end | ||
|cluster_id=chr3:182971089..182971100,+ | |||
|coexpression_cluster_id=C979 | |||
|description=CAGE_peak_12_at_B3GNT5_5end | |description=CAGE_peak_12_at_B3GNT5_5end | ||
|id=chr3:182971089..182971100,+ | |id=chr3:182971089..182971100,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.84e-28!42;CL:0000860!8.70e-25!45;CL:0000766!1.02e-24!76;CL:0000557!1.19e-21!71;CL:0002009!5.26e-20!65;CL:0000839!1.42e-19!70;CL:0002194!1.55e-18!63;CL:0000576!1.55e-18!63;CL:0000040!1.55e-18!63;CL:0000559!1.55e-18!63;CL:0000763!2.36e-14!112;CL:0000049!2.36e-14!112;CL:0000738!7.48e-08!140;CL:0002076!3.23e-07!43 | |ontology_enrichment_celltype=CL:0002057!5.84e-28!42;CL:0000860!8.70e-25!45;CL:0000766!1.02e-24!76;CL:0000557!1.19e-21!71;CL:0002009!5.26e-20!65;CL:0000839!1.42e-19!70;CL:0002194!1.55e-18!63;CL:0000576!1.55e-18!63;CL:0000040!1.55e-18!63;CL:0000559!1.55e-18!63;CL:0000763!2.36e-14!112;CL:0000049!2.36e-14!112;CL:0000738!7.48e-08!140;CL:0002076!3.23e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.17e-60;33!CL:0002057;1.17e-60;33!CL:0000473;7.08e-42;39!CL:0000234;7.08e-42;39!CL:0000576;2.68e-32;48!CL:0000766;5.65e-25;69!CL:0000763;4.05e-10;100!CL:0000094;5.93e-10;8!CL:0002087;4.98e-08;104!CL:0000771;8.23e-08;2!CL:0000738;1.19e-07;136!CL:0001014;1.51e-07;2!CL:0001016;1.51e-07;2!CL:0000081;4.07e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.64e-63,42;CL:0002057,7.64e-63,42;CL:0000473,6.95e-54,48;CL:0000234,6.95e-54,48;CL:0000766,1.00e-51,72;CL:0002009,9.90e-49,61;CL:0000557,1.06e-46,67;CL:0002194,4.17e-44,59;CL:0000576,4.17e-44,59;CL:0000040,4.17e-44,59;CL:0000559,4.17e-44,59;CL:0000839,1.68e-41,66;CL:0000763,2.14e-35,108;CL:0000049,2.14e-35,108;CL:0000738,5.61e-26,136;CL:0002031,4.65e-22,120;CL:0002032,2.40e-20,161;CL:0000837,2.40e-20,161;CL:0000037,4.50e-19,168;CL:0002087,1.35e-18,115;CL:0000988,1.38e-17,177;CL:0000094,6.40e-10,8;CL:0000771,8.37e-08,2;CL:0001014,1.53e-07,2;CL:0001016,1.53e-07,2;CL:0000081,4.29e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;5.55e-47;42!CL:0000049;3.50e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.17e-18!80;UBERON:0001474!2.41e-16!86;UBERON:0002193!9.30e-16!112;UBERON:0004765!2.30e-15!101;UBERON:0001434!2.30e-15!101;UBERON:0002405!6.14e-15!115;UBERON:0002390!7.86e-15!102;UBERON:0003061!7.86e-15!102;UBERON:0002204!2.09e-07!167;UBERON:0000922!4.42e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.16e-40,76;UBERON:0001474,1.65e-36,82;UBERON:0004765,1.88e-32,90;UBERON:0002405,4.12e-31,93;UBERON:0002390,5.08e-31,98;UBERON:0003061,5.08e-31,98;UBERON:0001434,2.71e-28,100;UBERON:0002193,2.80e-27,108;UBERON:0002204,2.13e-15,167;UBERON:0003081,3.98e-11,203 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.990130823680373,0,0,0,0,0,0.123121058076788,0,0,0.85870796139317,0.273748850145768,0,0,0,0,0.393364276848904,1.15148819429164,0.464448369948228,0,0,0.739508020333575,0,0,0.587200878669695,2.21598163412751,1.80490002723128,1.08505435357926,0,0,0.257575567634187,0.726991193897824,1.51150377475524,0.485168122375632,1.85943229524548,3.28934310417461,6.19412741790207,11.2200033005639,11.5272317938095,27.1954564371873,3.10271112662957,7.74581620300591,8.12558919566051,1.50593871634084,1.36453075028923,4.04502272001152,4.89734227793444,5.1348644332175,3.19668562899521,3.95821560224059,4.3882004676759,9.80316926225197,3.19230162491442,2.26954089876456,4.9825779919646,16.3311632416883,14.6015217157656,33.447082084588,3.02699751316684,5.15588690382591,5.69632297393592,0.845021145247767,0,0.419317291016752,0.44931452458598,0.750884464207532,0.32145117339416,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0.221729397462564,0.263504357079378,0.0654895377488563,0,0.370784442784429,0.649094787309367,1.0447784237956,0.26591592103773,0,0,0,0.39752481473341,0,0,0,0,0.550236083880135,0,0.775250277507987,0,0.66944122552934,0.402829317109147,0.760272105718513,0.488124115096339,0.367663080345869,0,0.357198913136319,0,0.112611480483322,0,0,0,18.4492584410489,27.1446184903828,0.436094052142534,0,0,0,0,0,0,0,0,0.622422070799533,0.404132016209064,0.817309515567294,0.151357427644931,0,0.468642863667593,0,0,0.448346041655403,0.23486899728753,0.161872944368132,0.561803226808994,0.408308342509787,0.245668634623536,0.206651562351531,0,0,0,0,0.673344455816265,0.375355559615893,0.831192346452549,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31913023795956,1.09098448236334,0.286804595389004,0.121973706129595,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0.368965315629341,0.343135620597051,1.42675371031213,0,0.904760751704678,1.85176890317059,0.325808305310325,0,0,0.34779121492523,0,0.866198686566443,0.462985512576611,0.380508304469197,0,0,0.492434012174795,0,0.148631162288728,0,0.671928512795438,0.708875486211932,1.25381931783988,0.871901815541886,0,54.6856194064497,0.528290604079356,0.621984346622316,0.432359860250884,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.36669142910475,0.258543431515556,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.710783897485092,0,0,0,0,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0.537182889719687,0,0.197030760201927,0,0,0.76228387266739,2.60279707715243,0,0,0,14.9801404789436,0,15.7477895105693,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.862856803274467,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.802025881213139,0.828728900423067,0,0,0,0,0.231046011313244,0,0,0.633309773357254,0,0.340187410553031,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0.413509717453592,0,0.145016693914229,0.170453254832202,0,2.97512847649761,1.15314040419064,1.65896526242959,0.6069466851333,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,1.28381696410176,0,0,0.359744915166629,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0.384888450902048,0.670302275535787,1.08890984861323,2.2594512186427,0,0,0,1.1486170010348,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0.649243880549111,0.280797178113459,0,0,0,0,0,0,0,0,0.921722292925374,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,0.47748896947538,0,0,0,0.140669416410513,0.333926115068718,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,2.50629644545853,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0.113942055847001,4.84184199214926,4.21860928725929,0.217294743844016,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,1.83309043480088,0,0,0,0.269604531922708,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0.379119477770928,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0,0.277349346026277,0,0.391969589657511,0.0870592065804026,0.17472666824203,0,0,0,0,0.969890164884194,0,0.225980740780532,0.822251547880505,0,0.0633107959558787,0.195551382734803,0.480952921509202,0,0,0,0,0.171594997861965,0.14405479798815,0.124252535565433,0.707082103850386,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,0.393709926058995,0,0,0.136203406111576,0.160753148465019,0,0.415440338029185,14.1733551677445,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| ||
|short_description=p12@B3GNT5 | |short_description=p12@B3GNT5 | ||
}} | }} |
Latest revision as of 23:42, 16 September 2015
Short description: | p12@B3GNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_B3GNT5_5end |
Coexpression cluster: | C979_Mast_CD14_Eosinophils_immature_Neutrophils_CD4_Basophils |
Association with transcript: | 18bp_to_ENST00000493370_5end |
EntrezGene: | B3GNT5 |
HGNC: | 15684 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.64e-63 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.64e-63 | 42 |
defensive cell | 6.95e-54 | 48 |
phagocyte | 6.95e-54 | 48 |
myeloid leukocyte | 1.00e-51 | 72 |
macrophage dendritic cell progenitor | 9.90e-49 | 61 |
granulocyte monocyte progenitor cell | 1.06e-46 | 67 |
monopoietic cell | 4.17e-44 | 59 |
monocyte | 4.17e-44 | 59 |
monoblast | 4.17e-44 | 59 |
promonocyte | 4.17e-44 | 59 |
myeloid lineage restricted progenitor cell | 1.68e-41 | 66 |
myeloid cell | 2.14e-35 | 108 |
common myeloid progenitor | 2.14e-35 | 108 |
leukocyte | 5.61e-26 | 136 |
hematopoietic lineage restricted progenitor cell | 4.65e-22 | 120 |
hematopoietic oligopotent progenitor cell | 2.40e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.40e-20 | 161 |
hematopoietic stem cell | 4.50e-19 | 168 |
nongranular leukocyte | 1.35e-18 | 115 |
hematopoietic cell | 1.38e-17 | 177 |
granulocyte | 6.40e-10 | 8 |
eosinophil | 8.37e-08 | 2 |
CD1a-positive Langerhans cell | 1.53e-07 | 2 |
immature CD1a-positive Langerhans cell | 1.53e-07 | 2 |
blood cell | 4.29e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.16e-40 | 76 |
bone element | 1.65e-36 | 82 |
skeletal element | 1.88e-32 | 90 |
immune system | 4.12e-31 | 93 |
hematopoietic system | 5.08e-31 | 98 |
blood island | 5.08e-31 | 98 |
skeletal system | 2.71e-28 | 100 |
hemolymphoid system | 2.80e-27 | 108 |
musculoskeletal system | 2.13e-15 | 167 |
lateral plate mesoderm | 3.98e-11 | 203 |