FFCP PHASE1:Hg19::chr12:122502182..122502193,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZSU1 | |UniProt=Q6ZSU1 | ||
|association_with_transcript=-69bp_to_ENST00000423999_5end | |association_with_transcript=-69bp_to_ENST00000423999_5end | ||
|cluster_id=chr12:122502182..122502193,+ | |||
|description=CAGE_peak_3_at_ENST00000423999_5end | |description=CAGE_peak_3_at_ENST00000423999_5end | ||
|id=chr12:122502182..122502193,+ | |id=chr12:122502182..122502193,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002581;1.96e-12;1!CL:0000669;4.82e-12;4!CL:0000650;7.60e-07;2!CL:1000500;7.60e-07;2!CL:1000618;7.60e-07;2!CL:1001318;7.60e-07;2!CL:0002097;7.60e-07;2!CL:0002575;7.60e-07;2!CL:0002173;7.60e-07;2!CL:0002367;7.60e-07;2!CL:0002253;7.60e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,8.85e-13,1;CL:0000669,4.09e-12,4;CL:0000650,4.83e-07,2;CL:1000500,4.83e-07,2;CL:1000618,4.83e-07,2;CL:1001318,4.83e-07,2;CL:0002173,4.83e-07,2;CL:0002097,7.20e-07,2;CL:0002253,8.06e-07,2;CL:0002367,9.54e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.90e-12!239;DOID:162!1.09e-10!235;DOID:0050686!2.57e-07!137 | |ontology_enrichment_disease=DOID:14566!4.90e-12!239;DOID:162!1.09e-10!235;DOID:0050686!2.57e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:1909;7.60e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.02e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.60e-07;2!UBERON:0002757;7.60e-07;2!UBERON:0010134;7.60e-07;2!UBERON:0003567;7.60e-07;2!UBERON:0003838;7.60e-07;2!UBERON:0003586;7.60e-07;2!UBERON:0005169;7.60e-07;2!UBERON:0005408;7.60e-07;2!UBERON:0002321;7.60e-07;2!UBERON:0005969;7.60e-07;2!UBERON:0005406;7.60e-07;2!UBERON:0005215;7.60e-07;2!UBERON:0002303;7.60e-07;2!UBERON:0001899;7.60e-07;2!UBERON:0002319;7.60e-07;2!UBERON:0003956;7.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,4.83e-07,2;UBERON:0003838,4.83e-07,2;UBERON:0003586,4.83e-07,2;UBERON:0005169,4.83e-07,2;UBERON:0002321,4.83e-07,2;UBERON:0005215,4.83e-07,2;UBERON:0002303,4.83e-07,2;UBERON:0002319,4.83e-07,2;UBERON:0005406,5.11e-07,2;UBERON:0005969,9.54e-07,2;UBERON:0003956,9.54e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.791300934685361,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0.232401601740905,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0.443458794925128,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.69716365721711,0.518305275076852,0.504641701751257,0.72995471815166,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0,0.791951872933429,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,1.02943027143257,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,1.48418066444991,0,0,0.164254312027618,0,0,0.483437798366489,0,0,0.34444334449382,0,0.262248829918848,0,0,0,0,0.211103257785751,0,0,0,0,0.270946437543853,1.50506932156456,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0.429680979473094,0.290033387828457,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0.329294892959902,0.379473173765715,1.04980416073495,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0.144269212976445,0,0.159426272728822,0,0,0.211673582723883,0,0,0.456469358066384,0,0,0.169291777801603,0.1605880751037,1.00899853595524,0,0,1.22896305723383,0,0.166849141711909,0,0.556812347790485,0,1.35227839237992,0,0,0.748562161632879,0,0.242721043499027,0.334330152832435,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,0.472775363535873,0,0.291604613383254,0,0,0,0,0,0,0,0.32681539055697,0.139423744278603,0,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0.451191321234361,0.19606253431774,1.00692952185506,0.37950746544837,0,0.210998064528027,0.489698424477443,0.141353071433941,1.08194319871046,0,0,0,0,0,0,0.269604531922708,0,0,0.547364367646998,0.391329237864179,0,0,1.20990716048664,0,0.063186579628488,0.450970258243478,0.518440956986236,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0.19871461170299,0.126621591911757,0,0,0,0,0.432271251462318,0,0,0,2.60930324687408,0,0.407712618220842,0.104602846312333,0,0.577901179803038,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0.134366944973453,0.720599767084807,1.16495949527454,0.0787831823072236,0,0,0,0.508039992394707,0,0,0.803765742325096,0.825236619583403,0,0,0,0,0,0,0.0524545881349981,0,0.35857467866569,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0.328370082997356,0.681552087141687,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0,0,0.790446527591777,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,1.06154382279153,0.285465333544967,0.235265819698172,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0,0,1.14241563650639,1.22061219961398,0.545545977607678,0,0,0,0,0,0,0,1.15571898244382,0,0.782982875895635,0,0.231522474323834,0.734210113519403,0,0.308801447160972,0.219284049578707,0,0.38582807654183,0.337884881306145,0.256241518587947,0.690860683462397,0,0.276516872303462,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0.123935764259002,0,0.318004350653419,0.94634094001504,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.392590874004102,0,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0.147856086217045,0,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0,1.00885116665647,0,0.227662191351298,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0.280272163313789,0,0.647782773655864,0.9555033757741,0,0,0.697448552208751,0,0,0,0,0,0,0.473328002922261,0.170426809518315,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.905777061400041,0,0,0.470317296361523,0,0.471353094203252,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0,0.504665699340316,0.546327859818478,0.253397002022874,0.305966489225945,1.06886962106224,0.36757959813938,0.250707539292375,0,0,0,0.20686599172379,0,0,0,0.186224142887574,0.448527450322454,0,0,0,0,0,0,0,0,0.426909383510862,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.791300934685361,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0.232401601740905,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0.443458794925128,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.69716365721711,0.518305275076852,0.504641701751257,0.72995471815166,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0,0.791951872933429,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,1.02943027143257,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,1.48418066444991,0,0,0.164254312027618,0,0,0.483437798366489,0,0,0.34444334449382,0,0.262248829918848,0,0,0,0,0.211103257785751,0,0,0,0,0.270946437543853,1.50506932156456,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0.429680979473094,0.290033387828457,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0.329294892959902,0.379473173765715,1.04980416073495,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0.144269212976445,0,0.159426272728822,0,0,0.211673582723883,0,0,0.456469358066384,0,0,0.169291777801603,0.1605880751037,1.00899853595524,0,0,1.22896305723383,0,0.166849141711909,0,0.556812347790485,0,1.35227839237992,0,0,0.748562161632879,0,0.242721043499027,0.334330152832435,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,0.472775363535873,0,0.291604613383254,0,0,0,0,0,0,0,0.32681539055697,0.139423744278603,0,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0.451191321234361,0.19606253431774,1.00692952185506,0.37950746544837,0,0.210998064528027,0.489698424477443,0.141353071433941,1.08194319871046,0,0,0,0,0,0,0.269604531922708,0,0,0.547364367646998,0.391329237864179,0,0,1.20990716048664,0,0.063186579628488,0.450970258243478,0.518440956986236,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0.19871461170299,0.126621591911757,0,0,0,0,0.432271251462318,0,0,0,2.60930324687408,0,0.407712618220842,0.104602846312333,0,0.577901179803038,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0.134366944973453,0.720599767084807,1.16495949527454,0.0787831823072236,0,0,0,0.508039992394707,0,0,0.803765742325096,0.825236619583403,0,0,0,0,0,0,0.0524545881349981,0,0.35857467866569,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0.328370082997356,0.681552087141687,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0,0,0.790446527591777,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,1.06154382279153,0.285465333544967,0.235265819698172,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0,0,1.14241563650639,1.22061219961398,0.545545977607678,0,0,0,0,0,0,0,1.15571898244382,0,0.782982875895635,0,0.231522474323834,0.734210113519403,0,0.308801447160972,0.219284049578707,0,0.38582807654183,0.337884881306145,0.256241518587947,0.690860683462397,0,0.276516872303462,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0.123935764259002,0,0.318004350653419,0.94634094001504,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.392590874004102,0,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0.147856086217045,0,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0,1.00885116665647,0,0.227662191351298,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0.280272163313789,0,0.647782773655864,0.9555033757741,0,0,0.697448552208751,0,0,0,0,0,0,0.473328002922261,0.170426809518315,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.905777061400041,0,0,0.470317296361523,0,0.471353094203252,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0,0.504665699340316,0.546327859818478,0.253397002022874,0.305966489225945,1.06886962106224,0.36757959813938,0.250707539292375,0,0,0,0.20686599172379,0,0,0,0.186224142887574,0.448527450322454,0,0,0,0,0,0,0,0,0.426909383510862,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 | ||
|short_description=p3@ENST00000423999 | |short_description=p3@ENST00000423999 | ||
}} | }} |
Latest revision as of 23:40, 16 September 2015
Short description: | p3@ENST00000423999 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000423999_5end |
Coexpression cluster: | NA |
Association with transcript: | -69bp_to_ENST00000423999_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 8.85e-13 | 1 |
pericyte cell | 4.09e-12 | 4 |
mesangial cell | 4.83e-07 | 2 |
kidney interstitial cell | 4.83e-07 | 2 |
juxtaglomerular complex cell | 4.83e-07 | 2 |
renal interstitial pericyte | 4.83e-07 | 2 |
extraglomerular mesangial cell | 4.83e-07 | 2 |
cortical cell of adrenal gland | 7.20e-07 | 2 |
epithelial cell of large intestine | 8.06e-07 | 2 |
trabecular meshwork cell | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 4.83e-07 | 2 |
abdominal segment connective tissue | 4.83e-07 | 2 |
trunk connective tissue | 4.83e-07 | 2 |
interstitial tissue | 4.83e-07 | 2 |
extraglomerular mesangium | 4.83e-07 | 2 |
kidney interstitium | 4.83e-07 | 2 |
juxtaglomerular apparatus | 4.83e-07 | 2 |
mesangium | 4.83e-07 | 2 |
perirenal fat | 5.11e-07 | 2 |
reticulum trabeculare | 9.54e-07 | 2 |
aqueous drainage system | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.02e-07 | 2 |