FFCP PHASE1:Hg19::chr10:127511845..127511859,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:127511845..127511859,- to FFCP PHASE1:Hg19::chr10:127511845..127511859,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7390 | |EntrezGene=7390 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12592 | |HGNC=12592 | ||
|TSSclassifier=strong | |||
|UniProt=P10746 | |UniProt=P10746 | ||
|association_with_transcript=-8bp_to_NM_000375,uc001lix.3,uc001liy.3_5end | |||
|cluster_id=chr10:127511845..127511859,- | |||
|description=CAGE_peak_3_at_UROS_5end | |||
|id=chr10:127511845..127511859,- | |||
|ontology_enrichment_celltype=CL:0000055!4.60e-17!180;CL:0000183!8.28e-15!59;CL:0000192!2.08e-14!42;CL:0000514!2.08e-14!42;CL:0000187!3.49e-13!54;CL:0000680!3.68e-13!57;CL:0000056!3.68e-13!57;CL:0000355!3.68e-13!57;CL:0000359!7.35e-13!32;CL:0000222!4.87e-12!119;CL:0000393!6.94e-11!60;CL:0000211!6.94e-11!60;CL:0000057!1.11e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.12e-12;32!CL:0000192;2.71e-10;43!CL:0000187;2.69e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,9.50e-14,43;CL:0000514,9.50e-14,43;CL:0000359,7.26e-13,32;CL:0000187,1.15e-12,55;CL:0000680,1.16e-12,58;CL:0000056,1.16e-12,58;CL:0000355,1.16e-12,58;CL:0000222,6.44e-12,121;CL:0000393,1.81e-10,61;CL:0000211,1.81e-10,61;CL:0000057,1.57e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;2.71e-10;43!CL:0000355;1.78e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.31e-15!83;UBERON:0002329!1.31e-15!83;UBERON:0003077!1.31e-15!83;UBERON:0003059!1.31e-15!83;UBERON:0007282!1.31e-15!83;UBERON:0009618!1.31e-15!83;UBERON:0007285!1.31e-15!83;UBERON:0004290!6.03e-15!70;UBERON:0000486!1.04e-13!82;UBERON:0001134!2.25e-13!61;UBERON:0002036!2.25e-13!61;UBERON:0003082!2.25e-13!61;UBERON:0002385!4.18e-13!63;UBERON:0001015!4.18e-13!63;UBERON:0000383!4.18e-13!63;UBERON:0005256!3.22e-12!143;UBERON:0002100!7.17e-11!216;UBERON:0003104!3.94e-10!238;UBERON:0009142!3.94e-10!238;UBERON:0001637!4.09e-10!42;UBERON:0003509!4.09e-10!42;UBERON:0004572!4.09e-10!42;UBERON:0001981!1.42e-08!60;UBERON:0007500!1.42e-08!60;UBERON:0004537!1.42e-08!60;UBERON:0006965!1.42e-08!60;UBERON:0002049!1.67e-08!79;UBERON:0007798!1.67e-08!79;UBERON:0004573!2.36e-08!33;UBERON:0004571!2.36e-08!33;UBERON:0003914!2.94e-08!118;UBERON:0004872!7.03e-08!84;UBERON:0000481!7.64e-08!347;UBERON:0000055!8.06e-08!69;UBERON:0000475!5.36e-07!365;UBERON:0000490!9.88e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.63e-07;33!UBERON:0004571;2.63e-07;33!UBERON:0001637;6.32e-07;42!UBERON:0003509;6.32e-07;42!UBERON:0004572;6.32e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,8.35e-16,78;UBERON:0007524,6.62e-15,73;UBERON:0002329,1.81e-14,71;UBERON:0003059,1.81e-14,71;UBERON:0007282,1.81e-14,71;UBERON:0004290,1.81e-14,71;UBERON:0009618,1.81e-14,71;UBERON:0003077,1.94e-14,72;UBERON:0007285,1.94e-14,72;UBERON:0000486,2.83e-13,83;UBERON:0001134,6.82e-13,62;UBERON:0002036,6.82e-13,62;UBERON:0003082,6.82e-13,62;UBERON:0002385,1.22e-12,64;UBERON:0001015,1.22e-12,64;UBERON:0000383,1.22e-12,64;UBERON:0003104,2.56e-12,160;UBERON:0009142,2.56e-12,160;UBERON:0001637,4.06e-10,42;UBERON:0003509,4.06e-10,42;UBERON:0004572,4.06e-10,42;UBERON:0002100,5.39e-10,199;UBERON:0005256,6.41e-10,122;UBERON:0007500,8.65e-09,59;UBERON:0001981,8.65e-09,59;UBERON:0004537,8.65e-09,59;UBERON:0006965,8.65e-09,59;UBERON:0002049,1.12e-08,78;UBERON:0007798,1.12e-08,78;UBERON:0003914,1.79e-08,117;UBERON:0004573,2.34e-08,33;UBERON:0004571,2.34e-08,33;UBERON:0004872,5.01e-08,83;UBERON:0000055,5.37e-08,68;UBERON:0000490,8.78e-08,148 | |||
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| ||
|short_description=p3@UROS | |||
}} | }} |
Latest revision as of 23:40, 16 September 2015
Short description: | p3@UROS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UROS_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_NM_000375, uc001lix.3, uc001liy.3_5end |
EntrezGene: | UROS |
HGNC: | 12592 |
UniProt: | P10746 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 9.50e-14 | 43 |
smooth muscle myoblast | 9.50e-14 | 43 |
vascular associated smooth muscle cell | 7.26e-13 | 32 |
muscle cell | 1.15e-12 | 55 |
muscle precursor cell | 1.16e-12 | 58 |
myoblast | 1.16e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.16e-12 | 58 |
mesodermal cell | 6.44e-12 | 121 |
electrically responsive cell | 1.81e-10 | 61 |
electrically active cell | 1.81e-10 | 61 |
fibroblast | 1.57e-07 | 76 |