FFCP PHASE1:Hg19::chr9:21995302..21995358,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1029 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1787 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_ENST00000498628_5end | |||
|cluster_id=chr9:21995302..21995358,- | |||
|description=CAGE_peak_7_at_CDKN2A_5end | |||
|id=chr9:21995302..21995358,- | |||
|ontology_enrichment_celltype=CL:0002031!2.07e-22!124;CL:0000738!2.36e-21!140;CL:0002087!9.94e-20!119;CL:0000988!7.45e-18!182;CL:0002032!3.84e-17!165;CL:0000837!3.84e-17!165;CL:0000037!1.14e-16!172;CL:0000566!1.14e-16!172;CL:0000839!2.60e-15!70;CL:0000557!2.77e-15!71;CL:0000860!2.86e-15!45;CL:0002057!4.01e-14!42;CL:0002009!6.55e-14!65;CL:0000766!2.41e-13!76;CL:0000003!2.58e-13!722;CL:0002194!7.14e-13!63;CL:0000576!7.14e-13!63;CL:0000040!7.14e-13!63;CL:0000559!7.14e-13!63;CL:0000063!1.42e-11!578;CL:0002320!5.24e-11!365;CL:0000134!1.31e-10!358;CL:0000763!1.53e-10!112;CL:0000049!1.53e-10!112;CL:0000219!4.21e-08!390;CL:0000012!1.37e-07!682;CL:0000048!2.28e-07!430;CL:0000723!4.54e-07!436;CL:0000548!5.74e-07!679;CL:0000004!5.74e-07!679;CL:0000255!5.74e-07!679;CL:0000542!5.78e-07!53;CL:0000051!5.78e-07!53;CL:0000838!7.48e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000766;6.46e-09;69!CL:0000860;1.06e-08;33!CL:0002057;1.06e-08;33!CL:0000473;2.25e-08;39!CL:0000234;2.25e-08;39!CL:0000576;2.65e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,6.26e-19,120;CL:0000738,1.69e-18,136;CL:0002032,9.86e-18,161;CL:0000837,9.86e-18,161;CL:0000988,5.16e-17,177;CL:0000037,1.07e-16,168;CL:0000473,3.84e-16,48;CL:0000234,3.84e-16,48;CL:0000860,1.48e-15,42;CL:0002057,1.48e-15,42;CL:0000557,2.22e-15,67;CL:0000766,1.92e-14,72;CL:0000839,2.01e-14,66;CL:0002087,2.25e-14,115;CL:0000763,8.52e-14,108;CL:0000049,8.52e-14,108;CL:0002009,6.66e-13,61;CL:0002194,1.75e-11,59;CL:0000576,1.75e-11,59;CL:0000040,1.75e-11,59;CL:0000559,1.75e-11,59;CL:0002393,4.50e-08,9;CL:0002397,4.50e-08,9;CL:0000134,8.89e-08,354;CL:0002320,3.91e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;8.19e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.10e-16!102;UBERON:0003061!2.10e-16!102;UBERON:0002193!2.19e-16!112;UBERON:0002371!5.77e-15!80;UBERON:0001474!2.08e-14!86;UBERON:0004765!1.03e-11!101;UBERON:0001434!1.03e-11!101;UBERON:0002384!1.36e-10!375;UBERON:0002405!3.01e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,6.05e-16,82;UBERON:0002371,2.09e-15,76;UBERON:0002390,2.87e-13,98;UBERON:0003061,2.87e-13,98;UBERON:0004765,3.21e-13,90;UBERON:0002405,5.33e-13,93;UBERON:0002193,3.36e-11,108;UBERON:0001434,1.65e-10,100;UBERON:0002384,6.48e-07,371 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,1.78784437770915,0.872338524100369,0,1.26343974685366,1.04474251279935,0,0,0.655324116390517,0.791300934685361,0.74259811776028,0.662794751455832,0.672325146451775,1.80808358407193,0,0.975865597581014,0.984968464614303,1.22400414746552,0,0,0.821246550437305,0,0.993374274723366,0.656804715599566,0.550975469195755,7.08055698328027,2.68680578668049,3.56077083626975,0,0.30120591877825,0,1.39440961044543,2.13253848731132,0,25.4837887924664,8.42286679374595,14.9737500793938,1.11957737119962,0.32389366601898,0.257575567634187,0.290796477559129,1.13362783106643,0.242584061187816,1.62700325833979,1.23350366406548,1.23882548358041,1.7261543539329,0.256160706529101,0.709446689665756,5.17118521104928,3.22742341791913,2.70852973188684,0.941211697713023,1.63743690034707,1.34834090667051,3.97909060082173,4.17207735198922,1.91801137739712,0.329851300186716,0.797854630486527,0.426224750532694,4.06292934080018,3.40431134814684,3.11411124497787,1.50749199154046,1.0429658368404,0.868755378820466,2.42159801053347,8.47038562771399,3.79754864929061,0,2.76385589954557,2.09658645508376,0.898629049171961,1.05123824989054,0.964353520182481,1.71007646244749,2.58591680358817,2.92262646023414,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0.574752439954483,0,0,1.1384259382189,1.17447437874188,1.14681968437569,2.64342657158052,5.60508562981536,0.263384084775077,0.590129310341499,0.393010762749165,0.822405995998037,7.18901930179916,1.30368906653436,1.4203434172042,0,2.78526142212934,0.883817722424512,1.32920336750173,0,3.84273959177025,6.37290803043403,4.93313713811028,3.86890024900188,4.34704628602579,0.14828656316206,0,0,2.60611488204402,2.68254345521345,2.40539211837841,0.506039384039006,0.95569624297229,1.30216690771284,1.90090408889675,0.451725357233318,1.02389288923535,0,0.710331756132051,3.28451198768419,0.80642697289893,1.60464117470104,1.15859523106239,0,0,0,0,0.50133791063589,0.289693037921647,0.795285947051099,1.45990461090791,0.850813354476611,1.77383517970051,1.49319135678314,0.261958150995425,0,0,0.324547393654683,0.870648686496336,0.531831842075461,0.238490624305342,0.571994910780128,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0,0.275118041940067,0.208994966536811,0.775250277507987,0.71153252537342,0,1.20848795132744,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0.949265659568129,0.183201743930407,0,0,1.74437620857014,0,0.12663051166458,0.662045904066094,0.860509862246441,0.709336764396714,1.12135520028461,0,4.9333509683432,0,0.134710672069688,0.326923806226917,0.605429710579726,0,0.234321431833797,0.312160076830321,0,1.19558944441441,0.352303495931295,0,0,0.61246251376468,0.122834317311768,0.516628905878827,0,1.23633464639278,0,0.718618141816238,0,0,0.277064115484183,0.438977620880838,0.30648779579902,0.751190294532984,0.113432183160021,0.538168907066586,1.06778694409284,0,0.300091096084402,0.206105058476878,0.772921620136887,0.558350568994769,0.337552664482532,0.0974370051611986,0.252433774244115,0.644349290496095,0.80823028409406,0.355009592516614,0.302256294682921,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,1.85747171212792,0.721879481669586,1.41968160047813,1.18009283054671,0.964044119533928,1.98529150918309,2.17879444092406,1.18635309555548,2.29213223872279,1.76599318612811,2.69323009862473,0,0,0,0,0,0,0,0,0.122988438543114,0.857839051492628,0.109750285408626,0,0,0.370353780634118,0.325808305310325,0,0,0.231860809950154,5.75302601755526,0.866198686566443,0.462985512576611,0.570762456703795,0,0,0.984868024349589,1.40402559083543,1.0404181360211,0,0.16798212819886,0.141775097242386,1.07470227243418,0.290633938513962,0.383382679165211,7.8826118063351,2.64145302039678,1.03664057770386,3.89123874225796,1.00993946741104,0.126995788584338,1.90994212779139,0,1.71072446022705,0.411309970813294,0.300343057843917,0,0,0.43596006883328,0.07333828582095,1.68053230485111,7.15312891703765,0,0.26593811658487,0,1.28603687131071,1.41849132023278,0.799266537048298,0,0,0,0.325736184293735,0,0,1.20575750823834,0.871533458600294,0.199945982364114,1.2162378064119,1.00451418286425,0,0.479249710983165,1.14861935834114,0,0.144781306667579,1.43833425785268,0.358121926479791,1.12085143993527,1.57624608161542,1.50939302401662,2.69520376187472,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.813795071099207,0.415941723061614,0.535286966391485,0.315404830067869,0.468565659970853,1.80567659836631,4.5481500811197,1.03473071292505,0.664225598535437,0.737476674166813,1.39013783148933,0.195801157462741,0.686286847621712,0.82707210449155,1.50999940573032,0.960548020230999,0.606255142892519,0,0.30239029332968,1.73675465473144,0.767309866440312,0.561320188866147,0.768834895534206,1.53512174720011,1.93024705372329,1.48418066444991,0.616838775210622,1.59805552781814,0.574890092096664,1.55776328755086,0.464841513839837,0,0.601519410909855,0,0.574072240823034,0.364182336013434,0.655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| |||
|short_description=p7@CDKN2A | |||
}} |
Latest revision as of 23:25, 16 September 2015
Short description: | p7@CDKN2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CDKN2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000498628_5end |
EntrezGene: | CDKN2A |
HGNC: | 1787 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 6.26e-19 | 120 |
leukocyte | 1.69e-18 | 136 |
hematopoietic oligopotent progenitor cell | 9.86e-18 | 161 |
hematopoietic multipotent progenitor cell | 9.86e-18 | 161 |
hematopoietic cell | 5.16e-17 | 177 |
hematopoietic stem cell | 1.07e-16 | 168 |
defensive cell | 3.84e-16 | 48 |
phagocyte | 3.84e-16 | 48 |
classical monocyte | 1.48e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.48e-15 | 42 |
granulocyte monocyte progenitor cell | 2.22e-15 | 67 |
myeloid leukocyte | 1.92e-14 | 72 |
myeloid lineage restricted progenitor cell | 2.01e-14 | 66 |
nongranular leukocyte | 2.25e-14 | 115 |
myeloid cell | 8.52e-14 | 108 |
common myeloid progenitor | 8.52e-14 | 108 |
macrophage dendritic cell progenitor | 6.66e-13 | 61 |
monopoietic cell | 1.75e-11 | 59 |
monocyte | 1.75e-11 | 59 |
monoblast | 1.75e-11 | 59 |
promonocyte | 1.75e-11 | 59 |
intermediate monocyte | 4.50e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.50e-08 | 9 |
mesenchymal cell | 8.89e-08 | 354 |
connective tissue cell | 3.91e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone element | 6.05e-16 | 82 |
bone marrow | 2.09e-15 | 76 |
hematopoietic system | 2.87e-13 | 98 |
blood island | 2.87e-13 | 98 |
skeletal element | 3.21e-13 | 90 |
immune system | 5.33e-13 | 93 |
hemolymphoid system | 3.36e-11 | 108 |
skeletal system | 1.65e-10 | 100 |
connective tissue | 6.48e-07 | 371 |