FFCP PHASE1:Hg19::chr9:21994562..21994573,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1029 | |EntrezGene=1029 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1787 | |HGNC=1787 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N726 | |UniProt=Q8N726 | ||
|association_with_transcript=-72bp_to_ENST00000361570,ENST00000530628,NM_058195,uc003zpl.2_5end | |association_with_transcript=-72bp_to_ENST00000361570,ENST00000530628,NM_058195,uc003zpl.2_5end | ||
|cluster_id=chr9:21994562..21994573,- | |||
|description=CAGE_peak_17_at_CDKN2A_5end | |description=CAGE_peak_17_at_CDKN2A_5end | ||
|id=chr9:21994562..21994573,- | |id=chr9:21994562..21994573,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002252;3.31e-08;1!CL:0002127;9.38e-08;1!CL:0000911;9.38e-08;1!CL:0002581;9.38e-08;1!CL:0000814;9.38e-08;1 | |ontology_enrichment_celltype_v019=CL:0002252;3.31e-08;1!CL:0002127;9.38e-08;1!CL:0000911;9.38e-08;1!CL:0002581;9.38e-08;1!CL:0000814;9.38e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002252,3.10e-08,1;CL:0002581,6.10e-08,1;CL:0002127,6.97e-08,1;CL:0000914,6.97e-08,1;CL:0000911,6.97e-08,1;CL:0000814,6.97e-08,1;CL:0002042,6.97e-08,1;CL:0002039,6.97e-08,1;CL:0002040,6.97e-08,1;CL:0002041,6.97e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.31e-08;1 | |ontology_enrichment_development_v019=UBERON:0000358;3.31e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;9.38e-08;1!DOID:1799;9.38e-08;1!DOID:10165;9.38e-08;1!DOID:0070004;9.38e-08;1!DOID:1798;9.38e-08;1!DOID:225;9.38e-08;1 | |ontology_enrichment_disease_v019=DOID:4960;9.38e-08;1!DOID:1799;9.38e-08;1!DOID:10165;9.38e-08;1!DOID:0070004;9.38e-08;1!DOID:1798;9.38e-08;1!DOID:225;9.38e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,1.18e-07,1;DOID:0070004,1.18e-07,1;DOID:225,1.64e-07,1;DOID:1799,1.75e-07,1;DOID:10165,1.75e-07,1;DOID:1798,1.75e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;5.40e-09;7!UBERON:0001173;5.40e-09;7!UBERON:0004913;3.31e-08;1!UBERON:0003703;3.31e-08;1!UBERON:0001174;3.31e-08;1!UBERON:0004914;3.31e-08;1!UBERON:0002394;1.46e-07;4!UBERON:0003928;1.46e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002294;5.40e-09;7!UBERON:0001173;5.40e-09;7!UBERON:0004913;3.31e-08;1!UBERON:0003703;3.31e-08;1!UBERON:0001174;3.31e-08;1!UBERON:0004914;3.31e-08;1!UBERON:0002394;1.46e-07;4!UBERON:0003928;1.46e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,3.80e-08,1;UBERON:0003703,3.80e-08,1;UBERON:0001174,3.80e-08,1;UBERON:0004914,3.80e-08,1;UBERON:0002294,4.70e-07,9;UBERON:0001173,4.70e-07,9;UBERON:0004912,4.70e-07,9 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,1.0007329835313,0,0,0,0,0.783556884599516,0,0,0.218441372130172,0.527533956456907,0.495065411840187,0,0,0,0,0,0.246242116153576,0.816002764977012,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0.619737604642413,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0.668745981562712,0,0,0,0.222820913770347,0,0,0,0.384273959177026,0,0.657751618414705,0.552700035571697,0.579606171470105,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0.850813354476611,0.443458794925128,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,2.61656431285521,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0.468642863667593,0,0,0.747243402759005,0.352303495931295,0.161872944368132,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0.247266929278557,1.82032272387605,0,0,0,0.277064115484183,0.438977620880838,0,0,0.226864366320042,0.717558542755448,0,0.211931901159562,0,0.515262646192195,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.368199594569197,0.646584227275248,0,0.10075209822764,0.169560592310488,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0.721879481669586,0.591534000199219,0,0.482022059766964,0.882351781859152,0.217879444092406,0,0.808987848960987,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.462942225792648,0,0,0,0.579652024875384,0.70445216541493,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0.447792613514241,0,0.383382679165211,0,0.264145302039678,0,0,0,0,0.763976851116555,1.17217447210047,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,1.45710687191585,0.197030760201927,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.902838299183157,2.27407504055985,0,0.664225598535437,0,0.695068915744663,0,0,0,0.215714200818617,0,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,1.48418066444991,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0.362578348774867,0,0,0.229628896329213,0,0.393373244878272,0,0,0,1.46139224653261,0.422206515571503,0,0.340187410553031,0,1.54227252690289,0.541892875087706,0,0.254876273045038,0,0.895499018888713,0,0.261435451024901,0,0,0,0.103041011647722,1.28197250745681,0.330037999682352,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0.382838137483752,0.2023155617111,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0.571890581771475,0.511795582622668,0,0.318203247925937,1.56989728039846,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.409499734223957,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0.294747123039363,0,0,0,0,0,0.349934720244983,0.192444225451024,0,0,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0.185803175125719,0,0.213425530045242,0,0,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0,0.586164286206121,0,0,0,0,2.81974010175699,0,0,0.606802608747567,0.222886768554957,0,0,0.296964680832639,0,0,0,0.890469640183247,0.494411622680279,0,0,0,0.503865495708552,0,0,0.311039587661807,1.3480252672099,0,2.04628948090749,0,0,0,0,0.278304294485554,0,0,0,0,0,0.762760950878299,0,0.689486746482929,1.16641845353302,0.868124974666461,0,0.120596438625408,0,0,0,0,0.10893846351899,1.39423744278603,0,0.227884111694002,0,0.359030577639089,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0.424059214301822,0.649165919226273,0,0,0.611030144933625,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0.284609546029793,0.416024019039416,0.173559738335131,0,0.34823682632161,0.17472666824203,0,0.290268993867255,0.438535902517113,0.246346371159628,0,0,0,0,0,0.0633107959558787,1.36885967914362,0.721429382263803,0,0,0,0.114536596165916,0.171594997861965,0.14405479798815,0,1.17847017308398,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0.423366660328922,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0.670869375198532,0,0,0.316801009558219,0,1.53532157855556,0,0,0,0.542999601753713,0,0,1.19730191562487,0.656740165994712,0.340776043570843,0.339936274560377,0,0,0,0,0,0.704815022316672,0,0,0,0,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0.249960815924213,0,0,0,0,0.28984205722165,0.298509605773748,0,0,0.568209015825267,1.0062716070103,0,0.228840068396924,0.3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| ||
|short_description=p17@CDKN2A | |short_description=p17@CDKN2A | ||
}} | }} |
Latest revision as of 23:22, 16 September 2015
Short description: | p17@CDKN2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CDKN2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -72bp_to_ENST00000361570, ENST00000530628, NM_058195, uc003zpl.2_5end |
EntrezGene: | CDKN2A |
HGNC: | 1787 |
UniProt: | Q8N726 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 3.10e-08 | 1 |
perirenal preadipocyte | 6.10e-08 | 1 |
innate effector T cell | 6.97e-08 | 1 |
immature NK T cell | 6.97e-08 | 1 |
effector T cell | 6.97e-08 | 1 |
mature NK T cell | 6.97e-08 | 1 |
immature NK T cell stage IV | 6.97e-08 | 1 |
immature NK T cell stage I | 6.97e-08 | 1 |
immature NK T cell stage II | 6.97e-08 | 1 |
immature NK T cell stage III | 6.97e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 3.80e-08 | 1 |
extrahepatic bile duct | 3.80e-08 | 1 |
common bile duct | 3.80e-08 | 1 |
duodenal papilla | 3.80e-08 | 1 |
biliary system | 4.70e-07 | 9 |
biliary tree | 4.70e-07 | 9 |
biliary bud | 4.70e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.18e-07 | 1 |
myeloma | 1.18e-07 | 1 |
syndrome | 1.64e-07 | 1 |
islet cell tumor | 1.75e-07 | 1 |
endocrine pancreas cancer | 1.75e-07 | 1 |
pancreatic endocrine carcinoma | 1.75e-07 | 1 |