FFCP PHASE1:Hg19::chr19:22469215..22469229,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100287226 | |EntrezGene=100287226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32464 | |HGNC=32464 | ||
|TSSclassifier=strong | |||
|UniProt=A6NN14 | |UniProt=A6NN14 | ||
|association_with_transcript=-22bp_to_ENST00000357491,NM_001242680_5end | |association_with_transcript=-22bp_to_ENST00000357491,NM_001242680_5end | ||
|cluster_id=chr19:22469215..22469229,+ | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_2_at_ZNF729_5end | |description=CAGE_peak_2_at_ZNF729_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!1.21e-21!7;CL:0000586!1.21e-21!7 | |ontology_enrichment_celltype=CL:0000039!1.21e-21!7;CL:0000586!1.21e-21!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;4.46e-57;7!CL:0000586;4.46e-57;7 | |ontology_enrichment_celltype_v019=CL:0000039;4.46e-57;7!CL:0000586;4.46e-57;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.46e-57,7;CL:0000586,4.46e-57,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.43e-88;10!UBERON:0005564;1.43e-88;10!UBERON:0006603;7.81e-08;65 | |ontology_enrichment_development_v019=UBERON:0009117;1.43e-88;10!UBERON:0005564;1.43e-88;10!UBERON:0006603;7.81e-08;65 | ||
|ontology_enrichment_disease=DOID:3095!1.86e-12!22;DOID:2994!1.86e-12!22;DOID:6193!2.52e-07!1;DOID:14566!4.85e-07!239;DOID:0060085!5.14e-07!1;DOID:3165!5.14e-07!1;DOID:0060121!5.14e-07!1;DOID:2438!5.14e-07!1;DOID:4418!5.14e-07!1;DOID:0050619!5.78e-07!1;DOID:1357!5.78e-07!1 | |ontology_enrichment_disease=DOID:3095!1.86e-12!22;DOID:2994!1.86e-12!22;DOID:6193!2.52e-07!1;DOID:14566!4.85e-07!239;DOID:0060085!5.14e-07!1;DOID:3165!5.14e-07!1;DOID:0060121!5.14e-07!1;DOID:2438!5.14e-07!1;DOID:4418!5.14e-07!1;DOID:0050619!5.78e-07!1;DOID:1357!5.78e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.33e-18;22!DOID:2994;1.33e-18;22 | |ontology_enrichment_disease_v019=DOID:3095;1.33e-18;22!DOID:2994;1.33e-18;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.33e-18,22;DOID:2994,1.33e-18,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.26e-27!8;UBERON:0003135!1.48e-19!11;UBERON:0000991!5.90e-10!21;UBERON:0009196!5.90e-10!21;UBERON:0009117!5.90e-10!21;UBERON:0005564!5.90e-10!21;UBERON:0004176!1.79e-09!22;UBERON:0003101!1.79e-09!22;UBERON:0000079!1.79e-09!22;UBERON:0000988!1.34e-08!3;UBERON:0001282!4.57e-07!1;UBERON:0009842!4.57e-07!1;UBERON:0003704!4.57e-07!1;UBERON:0001171!4.57e-07!1;UBERON:0001172!4.57e-07!1;UBERON:0003112!5.45e-07!1;UBERON:0000032!5.45e-07!1;UBERON:0005253!5.45e-07!1;UBERON:0003128!5.45e-07!1;UBERON:0002241!5.45e-07!1;UBERON:0001703!5.45e-07!1;UBERON:0004761!5.45e-07!1;UBERON:0009617!5.45e-07!1;UBERON:0001764!5.78e-07!1;UBERON:0001825!5.78e-07!1;UBERON:0006834!7.29e-07!1 | |ontology_enrichment_uberon=UBERON:0000473!4.26e-27!8;UBERON:0003135!1.48e-19!11;UBERON:0000991!5.90e-10!21;UBERON:0009196!5.90e-10!21;UBERON:0009117!5.90e-10!21;UBERON:0005564!5.90e-10!21;UBERON:0004176!1.79e-09!22;UBERON:0003101!1.79e-09!22;UBERON:0000079!1.79e-09!22;UBERON:0000988!1.34e-08!3;UBERON:0001282!4.57e-07!1;UBERON:0009842!4.57e-07!1;UBERON:0003704!4.57e-07!1;UBERON:0001171!4.57e-07!1;UBERON:0001172!4.57e-07!1;UBERON:0003112!5.45e-07!1;UBERON:0000032!5.45e-07!1;UBERON:0005253!5.45e-07!1;UBERON:0003128!5.45e-07!1;UBERON:0002241!5.45e-07!1;UBERON:0001703!5.45e-07!1;UBERON:0004761!5.45e-07!1;UBERON:0009617!5.45e-07!1;UBERON:0001764!5.78e-07!1;UBERON:0001825!5.78e-07!1;UBERON:0006834!7.29e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.44e-110;8!UBERON:0003135;1.43e-80;11!UBERON:0000991;2.00e-42;21!UBERON:0003101;1.63e-40;22!UBERON:0000079;1.63e-40;22!UBERON:0002323;3.79e-16;45!UBERON:0003133;1.05e-14;44!UBERON:0002553;7.33e-11;52!UBERON:0005156;5.84e-09;59!UBERON:0000990;5.84e-09;59!UBERON:0004458;1.06e-08;48!UBERON:0000922;4.35e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.44e-110;8!UBERON:0003135;1.43e-80;11!UBERON:0000991;2.00e-42;21!UBERON:0003101;1.63e-40;22!UBERON:0000079;1.63e-40;22!UBERON:0002323;3.79e-16;45!UBERON:0003133;1.05e-14;44!UBERON:0002553;7.33e-11;52!UBERON:0005156;5.84e-09;59!UBERON:0000990;5.84e-09;59!UBERON:0004458;1.06e-08;48!UBERON:0000922;4.35e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.74e-110,8;UBERON:0003135,1.64e-80,11;UBERON:0000991,2.15e-42,21;UBERON:0009196,2.15e-42,21;UBERON:0009117,2.15e-42,21;UBERON:0005564,2.15e-42,21;UBERON:0004176,1.74e-40,22;UBERON:0003101,1.74e-40,22;UBERON:0000079,1.74e-40,22;UBERON:0002323,1.62e-19,46;UBERON:0003133,1.03e-18,48;UBERON:0004458,2.46e-18,49;UBERON:0003886,1.18e-16,54;UBERON:0005156,2.94e-15,59;UBERON:0000990,2.94e-15,59;UBERON:0002553,9.18e-15,61 | |||
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|short_description=p2@ZNF729 | |short_description=p2@ZNF729 | ||
}} | }} |
Latest revision as of 23:22, 16 September 2015
Short description: | p2@ZNF729 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZNF729_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -22bp_to_ENST00000357491, NM_001242680_5end |
EntrezGene: | ZNF729 |
HGNC: | 32464 |
UniProt: | A6NN14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.46e-57 | 7 |
germ cell | 4.46e-57 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.74e-110 | 8 |
male reproductive organ | 1.64e-80 | 11 |
gonad | 2.15e-42 | 21 |
indifferent external genitalia | 2.15e-42 | 21 |
indifferent gonad | 2.15e-42 | 21 |
gonad primordium | 2.15e-42 | 21 |
external genitalia | 1.74e-40 | 22 |
male organism | 1.74e-40 | 22 |
male reproductive system | 1.74e-40 | 22 |
body cavity | 1.62e-19 | 46 |
reproductive organ | 1.03e-18 | 48 |
body cavity or lining | 2.46e-18 | 49 |
body cavity precursor | 1.18e-16 | 54 |
reproductive structure | 2.94e-15 | 59 |
reproductive system | 2.94e-15 | 59 |
anatomical cavity | 9.18e-15 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.33e-18 | 22 |
germ cell cancer | 1.33e-18 | 22 |