FFCP PHASE1:Hg19::chr7:143079890..143079914,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7791 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13200 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-28bp_to_ENST00000436448_5end | |||
|cluster_id=chr7:143079890..143079914,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_9_at_ZYX_5end | |||
|id=chr7:143079890..143079914,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.03e-11!42;CL:0002194!4.32e-10!63;CL:0000576!4.32e-10!63;CL:0000040!4.32e-10!63;CL:0000559!4.32e-10!63;CL:0000144!7.57e-10!625;CL:0000766!9.01e-10!76;CL:0002371!9.84e-10!591;CL:0000860!1.56e-09!45;CL:0002009!3.53e-09!65;CL:0000839!3.95e-09!70;CL:0000557!7.85e-09!71;CL:0000222!1.32e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.53e-10;39!CL:0000234;1.53e-10;39!CL:0000860;3.02e-10;33!CL:0002057;3.02e-10;33!CL:0000576;3.14e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.25e-15,48;CL:0000234,6.25e-15,48;CL:0000860,1.58e-12,42;CL:0002057,1.58e-12,42;CL:0002194,3.45e-12,59;CL:0000576,3.45e-12,59;CL:0000040,3.45e-12,59;CL:0000559,3.45e-12,59;CL:0002009,2.53e-11,61;CL:0000766,9.75e-11,72;CL:0000839,4.76e-10,66;CL:0000557,1.07e-09,67 | |||
|ontology_enrichment_development_v019=CL:0002057;5.83e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.06e-13!216;UBERON:0002204!3.16e-12!167;UBERON:0000926!1.23e-11!448;UBERON:0004120!1.23e-11!448;UBERON:0006603!1.23e-11!448;UBERON:0002371!3.00e-08!80;UBERON:0004765!7.53e-08!101;UBERON:0001434!7.53e-08!101;UBERON:0001474!2.39e-07!86;UBERON:0004872!7.93e-07!84;UBERON:0002049!8.81e-07!79;UBERON:0007798!8.81e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.11e-18,315;UBERON:0004120,1.11e-18,315;UBERON:0006603,1.11e-18,315;UBERON:0003081,3.55e-14,203;UBERON:0002204,7.11e-13,167;UBERON:0001434,9.47e-10,100;UBERON:0004765,4.36e-09,90;UBERON:0002371,1.27e-08,76;UBERON:0001474,5.13e-08,82;UBERON:0002405,3.63e-07,93 | |||
|phase1_expression=3.08853244759946,2.78330681058278,2.96004248601539,0,2.68176656656373,0,5.06599756336621,3.79031924056099,4.96252693579693,0.737201809504527,2.79120467188971,0.436882744260345,1.05506791291381,0.990130823680373,1.98838425436749,2.01697543935533,0.602694528023977,0,1.46379839637152,0.123121058076788,0.816002764977012,0.940364164434263,0,0.410623275218653,0.251085279189606,0.382067028739756,0.0821005894499457,0.157421562627358,0.393364276848904,0,0.77408061658038,0.919421224478927,2.10844143144775,0.739508020333575,0,0,0,1.10799081706375,2.20598892217156,1.51907609501096,3.13481663935894,2.26725566213286,1.28787783817093,2.61716829803216,1.88937971844405,1.94067248950253,4.18372266430232,2.87817521615278,0.309706370895104,2.3015391385772,1.7931249457037,1.41889337933151,2.41321976515633,1.29096936716765,2.70852973188684,4.1413314699373,2.72906150057846,1.34834090667051,3.97909060082173,5.1348644332175,1.27867425159808,2.96866170168044,1.39624560335142,1.27867425159808,1.7412554317715,0,1.86846674698672,3.01498398308092,1.0429658368404,0.868755378820466,0.605399502633369,2.20966581592539,1.58231193720442,1.47878700418359,1.91343869968539,0.838634582033504,2.80821577866238,1.20141514273205,2.25015821375912,0.570025487482497,0.99458338599545,2.00930569141097,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0.786021525498329,1.02800749499755,0.668745981562712,0,0,0,1.00269411196656,0.883817722424512,0.443067789167242,1.62482318259009,0.768547918354051,0.780356085359269,0.164437904603676,0.276350017785848,0.579606171470105,0,0.267540828089713,0,0.679856056185397,0,0.34362744548263,0.759059076058509,0,0,0,0,0.255973222308837,1.24930726552346,0,0,0.201606743224732,1.06976078313403,0,0,1.34140171940727,0.12786256184353,2.1686349143074,2.00535164254356,0.579386075843295,0,0.973269740605272,0.472674085820339,1.10864698731282,1.14185221401064,0.196468613246569,1.45718115317017,1.11235332835329,0,1.0447784237956,0.930705723632056,0.238490624305342,0,0,1.78886166630035,2.58070378531837,1.73570250803797,0.56530794192401,1.25849830862972,2.47606237746061,1.46296476575767,0.516833518338658,0.35576626268671,0.66944122552934,1.20848795132744,1.52054421143703,2.68468263302986,0.367663080345869,3.24056779152704,0.446498641420399,0.44905874525234,0.450445921933289,0,0.949265659568129,0.916008719652036,0,0,0.436094052142534,1.98788780678127,2.40597972162702,0.397227542439656,0,2.12801029319014,1.12135520028461,3.20246987189115,0.98667019366864,0.311211035399766,1.21239604862719,1.14423332179421,0,1.15235184896,0.937285727335186,3.43376084513353,1.1409436430889,1.79338416662161,0.939475989150119,0.971237666208789,0.421352420106746,0.61246251376468,0.982674538494144,1.03325781175765,3.56400857184616,2.96720315134268,0.910161361938026,4.31170885089743,0,1.37630371859161,0.831192346452549,1.31693286264251,1.5324389789951,2.85452311922534,0.340296549480063,0.179389635688862,0.427114777637135,0.423863802319124,0,1.03052529238439,0.515281080091258,1.48893485065272,0,1.36411807225678,0.252433774244115,0.920498986422993,1.2931684545505,0.355009592516614,1.20902517873168,0.508681776931463,0.966304265816484,1.90922284413584,0.860413786167011,1.46368447355514,0.662648841607426,1.04574548582567,0.518305275076852,1.51392510525377,0.36497735907583,0,1.28648187638577,4.14404764057442,0.464367928031979,0,0.473227200159376,0.337169380156203,0,0.110293972732394,0.653638332277218,0.237270619111097,0.134831308160164,0,0.769494313892781,2.21446636387394,11.2193419042757,0.8231480226628,2.94017422771084,0,2.94848165003288,0.590789906681404,0,0.368965315629341,1.02940686179115,1.20725313949488,0,0.301586917234893,0.462942225792648,0,3.11980435583874,0,0.34779121492523,0.469634776943287,1.01056513432752,1.38895653772983,0.380508304469197,0.790204397959275,0,1.72351904261178,0.234004265139238,1.93220510975347,0,1.34385702559088,1.13420077793909,0.0895585227028483,0.290633938513962,1.15014803749563,0.985326475791887,0.968532774145487,0.621984346622316,1.44119953416961,0.6312121671319,0.126995788584338,2.29193055334967,2.34434894420094,1.71072446022705,0.514137463516618,0.300343057843917,0.285826432630578,1.12131084345361,0.87192013766656,0.4400297149257,1.16344544182,14.3062578340753,0.845302752556,4.25500986535793,3.12022310734098,0.771622122786426,1.41849132023278,0.799266537048298,0.428933980974443,0.542621605391443,0.823240336780769,0,0.355391948742546,0,1.80863626235752,0.871533458600294,1.79951384127703,4.86495122564762,4.01805673145701,10.5416969741516,1.67737398844108,1.14861935834114,2.85273810081437,0.868687840005475,2.4657158706046,0.358121926479791,0.448340575974109,0.985153801009636,1.07813787429759,0.513372145118994,1.52456774533478,0,0.773288812777695,0.502548796003046,0.637938751653163,23.2192177423627,47.865833472644,29.0090859405225,1.8403723757871,4.00136416847742,1.08506009479894,2.49565033836969,3.92543775353756,1.10391690523754,1.87426263988341,1.80567659836631,6.82222512167955,1.03473071292505,0,1.84369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| |||
|short_description=p9@ZYX | |||
}} |
Latest revision as of 23:20, 16 September 2015
Short description: | p9@ZYX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ZYX_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -28bp_to_ENST00000436448_5end |
EntrezGene: | ZYX |
HGNC: | 13200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.25e-15 | 48 |
phagocyte | 6.25e-15 | 48 |
classical monocyte | 1.58e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.58e-12 | 42 |
monopoietic cell | 3.45e-12 | 59 |
monocyte | 3.45e-12 | 59 |
monoblast | 3.45e-12 | 59 |
promonocyte | 3.45e-12 | 59 |
macrophage dendritic cell progenitor | 2.53e-11 | 61 |
myeloid leukocyte | 9.75e-11 | 72 |
myeloid lineage restricted progenitor cell | 4.76e-10 | 66 |
granulocyte monocyte progenitor cell | 1.07e-09 | 67 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.11e-18 | 315 |
mesoderm-derived structure | 1.11e-18 | 315 |
presumptive mesoderm | 1.11e-18 | 315 |
lateral plate mesoderm | 3.55e-14 | 203 |
musculoskeletal system | 7.11e-13 | 167 |
skeletal system | 9.47e-10 | 100 |
skeletal element | 4.36e-09 | 90 |
bone marrow | 1.27e-08 | 76 |
bone element | 5.13e-08 | 82 |
immune system | 3.63e-07 | 93 |