FFCP PHASE1:Hg19::chr13:28195210..28195220,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222484 | |EntrezGene=222484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20421 | |HGNC=20421 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_uc001urm.1_5end | |association_with_transcript=23bp_to_uc001urm.1_5end | ||
|cluster_id=chr13:28195210..28195220,- | |||
|description=CAGE_peak_7_at_LNX2_5end | |description=CAGE_peak_7_at_LNX2_5end | ||
|id=chr13:28195210..28195220,- | |id=chr13:28195210..28195220,- | ||
|ontology_enrichment_celltype=CL:0002251!2.27e-13!21;CL:0002076!7.08e-13!43;CL:0000223!1.08e-11!59;CL:0002621!2.13e-08!3;CL:0000066!1.42e-07!254 | |ontology_enrichment_celltype=CL:0002251!2.27e-13!21;CL:0002076!7.08e-13!43;CL:0000223!1.08e-11!59;CL:0002621!2.13e-08!3;CL:0000066!1.42e-07!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.31e-12!106;DOID:1749!2.98e-11!14;DOID:0050687!1.75e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:5409;8.69e-18;4!DOID:1325;8.99e-11;7!DOID:3904;8.99e-11;7!DOID:3905;1.12e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.69e-18,4;DOID:1325,8.99e-11,7;DOID:3904,8.99e-11,7;DOID:3905,1.12e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0000166!3.36e-11!21;UBERON:0000161!3.43e-11!35;UBERON:0003729!1.58e-10!5;UBERON:0000344!2.16e-10!12;UBERON:0000165!3.08e-09!28;UBERON:0000930!3.08e-09!28;UBERON:0001007!6.46e-09!155;UBERON:0001555!6.46e-09!155;UBERON:0007026!6.46e-09!155;UBERON:0004119!7.24e-09!169;UBERON:0000925!7.24e-09!169;UBERON:0006595!7.24e-09!169;UBERON:0003343!7.34e-09!4;UBERON:0004785!7.34e-09!4;UBERON:0001949!2.13e-08!3;UBERON:0006947!2.53e-08!3;UBERON:0004054!2.53e-08!3 | |ontology_enrichment_uberon=UBERON:0000166!3.36e-11!21;UBERON:0000161!3.43e-11!35;UBERON:0003729!1.58e-10!5;UBERON:0000344!2.16e-10!12;UBERON:0000165!3.08e-09!28;UBERON:0000930!3.08e-09!28;UBERON:0001007!6.46e-09!155;UBERON:0001555!6.46e-09!155;UBERON:0007026!6.46e-09!155;UBERON:0004119!7.24e-09!169;UBERON:0000925!7.24e-09!169;UBERON:0006595!7.24e-09!169;UBERON:0003343!7.34e-09!4;UBERON:0004785!7.34e-09!4;UBERON:0001949!2.13e-08!3;UBERON:0006947!2.53e-08!3;UBERON:0004054!2.53e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001000;2.39e-66;1!UBERON:0005352;2.39e-66;1!UBERON:0006947;3.27e-23;3!UBERON:0004054;3.27e-23;3!UBERON:0005904;8.69e-18;4!UBERON:0002108;1.60e-14;4!UBERON:0000058;6.13e-08;10!UBERON:0003135;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,4.66e-66,1;UBERON:0005352,4.66e-66,1;UBERON:0006947,4.09e-23,3;UBERON:0004054,4.09e-23,3;UBERON:0005904,1.03e-17,4;UBERON:0002108,1.40e-14,4;UBERON:0003135,2.63e-07,11 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.860413786167011,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0.291604613383254,0,0,0.241192877250816,0,0,0,0,0,0.278847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0.19566461893209,0,1.18375320854817,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0,0,0.387956065953678,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0.0846733320657845,0,0,0,0.275078873194468,0.415440338029185,0,0.77380195455795,0,0.335434687599266,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0.157115589916002,0.280272163313789,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0.423387050190929,0.22910686854405,0,0,0.111855431797792,0.785201868921944,0.243835849964539,0,0,0,0,0,0,0,1.35535298446752,0,0.301925687133347,1.69783147837478,0.437119121007915,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0.342233301085281,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@LNX2 | |short_description=p7@LNX2 | ||
}} | }} |
Latest revision as of 23:19, 16 September 2015
Short description: | p7@LNX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LNX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_uc001urm.1_5end |
EntrezGene: | LNX2 |
HGNC: | 20421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vas deferens | 4.66e-66 | 1 |
spermatic cord | 4.66e-66 | 1 |
male genital duct | 4.09e-23 | 3 |
internal male genitalia | 4.09e-23 | 3 |
duct of male reproductive system | 1.03e-17 | 4 |
small intestine | 1.40e-14 | 4 |
male reproductive organ | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.69e-18 | 4 |
bronchus cancer | 8.99e-11 | 7 |
bronchogenic carcinoma | 8.99e-11 | 7 |
lung carcinoma | 1.12e-08 | 9 |