FFCP PHASE1:Hg19::chr9:21975236..21975249,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1029 | |EntrezGene=1029 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1787 | |HGNC=1787 | ||
|TSSclassifier=strong | |||
|UniProt=P42771,A5X2G7 | |UniProt=P42771,A5X2G7 | ||
|association_with_transcript=-104bp_to_NM_000077,NM_001195132_5end | |association_with_transcript=-104bp_to_NM_000077,NM_001195132_5end | ||
|cluster_id=chr9:21975236..21975249,- | |||
|coexpression_cluster_id=C370 | |||
|description=CAGE_peak_15_at_CDKN2A_5end | |description=CAGE_peak_15_at_CDKN2A_5end | ||
|id=chr9:21975236..21975249,- | |id=chr9:21975236..21975249,- | ||
|ontology_enrichment_celltype=CL:0000066!6.12e-12!254;CL:0000359!1.72e-09!32;CL:1000413!6.25e-09!9;CL:0002139!1.04e-07!24;CL:0000192!1.07e-07!42;CL:0000514!1.07e-07!42;CL:0000071!1.87e-07!18;CL:0002546!1.87e-07!18;CL:0000220!7.34e-07!246 | |ontology_enrichment_celltype=CL:0000066!6.12e-12!254;CL:0000359!1.72e-09!32;CL:1000413!6.25e-09!9;CL:0002139!1.04e-07!24;CL:0000192!1.07e-07!42;CL:0000514!1.07e-07!42;CL:0000071!1.87e-07!18;CL:0002546!1.87e-07!18;CL:0000220!7.34e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002595;1.81e-09;5!CL:0000306;3.86e-07;4!CL:0002222;3.86e-07;4!CL:0002224;3.86e-07;4!CL:0000359;6.54e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,4.09e-09,5;CL:0000306,4.16e-07,4;CL:0002222,4.16e-07,4;CL:0002224,4.16e-07,4;CL:0000359,4.67e-07,32;CL:0000066,7.63e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.97e-09;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!3.12e-14!42;UBERON:0003509!3.12e-14!42;UBERON:0004572!3.12e-14!42;UBERON:0002049!1.30e-13!79;UBERON:0007798!1.30e-13!79;UBERON:0001981!1.65e-13!60;UBERON:0007500!1.65e-13!60;UBERON:0004537!1.65e-13!60;UBERON:0006965!1.65e-13!60;UBERON:0000055!7.92e-13!69;UBERON:0004872!7.95e-12!84;UBERON:0001009!2.18e-10!113;UBERON:0004535!4.52e-10!110;UBERON:0001737!9.05e-10!9;UBERON:0003915!6.25e-09!9;UBERON:0004700!6.25e-09!9;UBERON:0001917!6.25e-09!9;UBERON:0000486!8.93e-09!82;UBERON:0004573!1.02e-08!33;UBERON:0004571!1.02e-08!33;UBERON:0000065!3.43e-08!53;UBERON:0003914!1.01e-07!118;UBERON:0000926!1.42e-07!448;UBERON:0004120!1.42e-07!448;UBERON:0006603!1.42e-07!448;UBERON:0001986!1.87e-07!18;UBERON:0004638!1.87e-07!18;UBERON:0004852!1.87e-07!18;UBERON:0008947!4.32e-07!38;UBERON:0003258!4.32e-07!38;UBERON:0001004!7.95e-07!72 | |ontology_enrichment_uberon=UBERON:0001637!3.12e-14!42;UBERON:0003509!3.12e-14!42;UBERON:0004572!3.12e-14!42;UBERON:0002049!1.30e-13!79;UBERON:0007798!1.30e-13!79;UBERON:0001981!1.65e-13!60;UBERON:0007500!1.65e-13!60;UBERON:0004537!1.65e-13!60;UBERON:0006965!1.65e-13!60;UBERON:0000055!7.92e-13!69;UBERON:0004872!7.95e-12!84;UBERON:0001009!2.18e-10!113;UBERON:0004535!4.52e-10!110;UBERON:0001737!9.05e-10!9;UBERON:0003915!6.25e-09!9;UBERON:0004700!6.25e-09!9;UBERON:0001917!6.25e-09!9;UBERON:0000486!8.93e-09!82;UBERON:0004573!1.02e-08!33;UBERON:0004571!1.02e-08!33;UBERON:0000065!3.43e-08!53;UBERON:0003914!1.01e-07!118;UBERON:0000926!1.42e-07!448;UBERON:0004120!1.42e-07!448;UBERON:0006603!1.42e-07!448;UBERON:0001986!1.87e-07!18;UBERON:0004638!1.87e-07!18;UBERON:0004852!1.87e-07!18;UBERON:0008947!4.32e-07!38;UBERON:0003258!4.32e-07!38;UBERON:0001004!7.95e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.28e-18;9!UBERON:0001557;1.28e-18;9!UBERON:0000065;7.62e-11;44!UBERON:0000072;5.93e-10;37!UBERON:0003834;1.81e-09;5!UBERON:0001533;1.81e-09;5!UBERON:0001637;5.65e-09;42!UBERON:0003509;5.65e-09;42!UBERON:0004572;5.65e-09;42!UBERON:0000490;4.36e-08;33!UBERON:0004573;2.04e-07;33!UBERON:0004571;2.04e-07;33!UBERON:0007500;3.32e-07;56!UBERON:0001981;3.32e-07;56!UBERON:0004537;3.32e-07;56!UBERON:0010077;3.86e-07;4!UBERON:0005389;3.86e-07;4!UBERON:0000484;3.86e-07;4!UBERON:0000965;3.86e-07;4!UBERON:0001803;3.86e-07;4!UBERON:0003513;9.32e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.81e-19,9;UBERON:0001637,3.95e-12,42;UBERON:0003509,3.95e-12,42;UBERON:0004572,3.95e-12,42;UBERON:0008947,1.84e-11,38;UBERON:0003258,1.84e-11,38;UBERON:0000065,4.72e-11,54;UBERON:0001557,7.97e-11,19;UBERON:0007500,3.40e-10,59;UBERON:0001981,3.40e-10,59;UBERON:0004537,3.40e-10,59;UBERON:0006965,3.40e-10,59;UBERON:0000072,3.73e-10,47;UBERON:0003834,4.09e-09,5;UBERON:0001533,4.09e-09,5;UBERON:0004573,1.83e-08,33;UBERON:0004571,1.83e-08,33;UBERON:0000055,2.63e-08,68;UBERON:0004872,4.62e-08,83;UBERON:0001004,5.81e-08,74;UBERON:0010077,4.16e-07,4;UBERON:0005389,4.16e-07,4;UBERON:0000484,4.16e-07,4;UBERON:0002546,4.16e-07,4;UBERON:0000965,4.16e-07,4;UBERON:0001803,4.16e-07,4;UBERON:0003073,4.16e-07,4;UBERON:0005426,4.16e-07,4;UBERON:0002049,9.60e-07,78;UBERON:0007798,9.60e-07,78 | |||
|phase1_expression=0,0,0,0,1.34088328328186,0.872338524100369,0,1.89515962028049,0,0,0,0,0.527533956456907,0,0.994192127183747,0,0,0,2.43966399395253,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,1.84877005083394,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.665188192387692,0.614843499851882,0,0.728590576585084,0,0,0,0,0,0,0,0.79504962946682,3.4409383804245,1.73570250803797,0.56530794192401,2.51699661725944,0.825354125820202,0.835979866147242,0.258416759169329,0,0.33472061276467,1.61131726843659,2.28081631715554,0.976248230192678,0.735326160691737,2.43042584364528,0,0,0,0,0,0.366403487860815,0,0,1.74437620857014,0,0,1.32409180813219,0,0,0.560677600142307,0,3.7000132262574,0,0.538842688278752,0,0.151357427644931,0,0,1.5608003841516,0.570471821544449,1.94283284717341,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,1.15956511897978,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,1.18306800039844,1.51726221070292,1.92808823906786,1.32352767278873,1.96091499683166,1.89816495288877,0.943819157121151,1.17732879075208,1.92373578473195,0,0,0,0,0,0,0,0,0,0.171567810298526,0.878002283269004,0,0.100528972411631,0.370353780634118,0,0,1.44331342025273,0.115930404975077,2.46558257895225,0.144366447761074,0,0.190254152234598,0,0,0,0.702012795417713,0.297262324577456,0.93733833986777,0.16798212819886,0.283550194484773,0,0,0,0,1.14462964217194,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,1.16344544182,0,0,0,0,0,0,0.799266537048298,0,0.542621605391443,0,0,0,0.791951872933429,1.50719688529793,2.61460037580088,0.499864955910285,0,0,0,0.479249710983165,0,0,0.289562613335158,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.300946099727719,6.82222512167955,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,1.02341449813341,0.804269605718038,1.48418066444991,0,0.355123450626254,0,0,0,0,2.6065841139427,0.276242966807689,0.114814448164607,0,0.131124414959424,0,0,0,0,0.316654886678627,1.13733384070897,0.510281115829547,0,0,0,0,0,0,0.447749509444357,0,0,0,0.328014645699706,0,0.103041011647722,0.54941678891006,0.495056999523528,0,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0,0,1.4875642382488,1.15314040419064,0.255225424989168,0.809262246844399,0.929691098594572,0.94443704049192,0,0.308033580176089,2.12922412126809,0,0.55597265731176,0.858749320451947,0,0.316379424718726,0,0.511795582622668,0.42793898803392,0,1.56989728039846,0,0,0,0.606547444719948,0,0,0,1.21856744815642,1.05650146756755,0,0.141405431953713,2.26016233240486,0.551365343546124,1.32687795048244,2.19225442626881,0,0.655894752046633,1.21746226177622,0.30982349809975,0.845086807596724,0.143411352204052,0.687743287091848,1.426684205925,0,0,0,0,0,0.0962221127255121,1.34060455107157,0,0,0.86101074534246,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,1.90506224451495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5579208140559,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0,0.874813840149763,0,0,0,0,0,0,0,0.21787692703798,0.41827123283581,0,0.455768223388005,0,0,0,0,0,0,0,0.627921025580099,0,0,0,0,0,0.158936578980379,0,0.326465616318295,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,1.20258735531594,0.207376382794494,0,0,0,0,0,0,0,0,2.61177619741208,0,0,1.06431964417994,0.877071805034227,1.47807822695777,0.290967049465258,0,0,0,1.19228767021794,0,0.195551382734803,0,0,0.39961921916426,0,0,0.171594997861965,1.29649318189335,0,0.471388069233591,0,0,0,0.577901179803038,0,0,0,0,0.788662062837943,0,0.229160424011684,0.717873024576814,0.199679000498991,0,0.223171457441873,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528001682597033,0,2.49489756515279,0,0,0,1.62899880526114,0.864221491201268,0.653174720218818,1.19730191562487,2.46277562248017,0.851940108927109,0.339936274560377,0,0,0,0,0,1.40963004463334,0,0,0.414239055347196,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0.869526171664951,0,0,1.10961172300523,1.13641803165053,0,0,1.60188047877847,0.302461847526478,0.15543720058278,0.295710299979268,0.318593534327405,0,0.155262956876259,0,0.797525143673985,0,0.150257608997218,1.14241563650639,0,0.545545977607678,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0.655219697692825,0,0.211312123358627,0.19998739585493,0,0,0,0,1.258915569475,0,0,0,0.157265941855896,0,0,0.21257492010168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| ||
|short_description=p15@CDKN2A | |short_description=p15@CDKN2A | ||
}} | }} |
Latest revision as of 23:19, 16 September 2015
Short description: | p15@CDKN2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CDKN2A_5end |
Coexpression cluster: | C370_acute_chronic_leukemia_CD34_testicular_Mast_H9 |
Association with transcript: | -104bp_to_NM_000077, NM_001195132_5end |
EntrezGene: | CDKN2A |
HGNC: | 1787 |
UniProt: | P42771A5X2G7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 4.09e-09 | 5 |
crystallin accumulating cell | 4.16e-07 | 4 |
vertebrate lens cell | 4.16e-07 | 4 |
lens epithelial cell | 4.16e-07 | 4 |
vascular associated smooth muscle cell | 4.67e-07 | 32 |
epithelial cell | 7.63e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.81e-19 | 9 |
artery | 3.95e-12 | 42 |
arterial blood vessel | 3.95e-12 | 42 |
arterial system | 3.95e-12 | 42 |
respiratory primordium | 1.84e-11 | 38 |
endoderm of foregut | 1.84e-11 | 38 |
respiratory tract | 4.72e-11 | 54 |
upper respiratory tract | 7.97e-11 | 19 |
epithelial tube open at both ends | 3.40e-10 | 59 |
blood vessel | 3.40e-10 | 59 |
blood vasculature | 3.40e-10 | 59 |
vascular cord | 3.40e-10 | 59 |
segment of respiratory tract | 3.73e-10 | 47 |
thoracic segment blood vessel | 4.09e-09 | 5 |
subclavian artery | 4.09e-09 | 5 |
systemic artery | 1.83e-08 | 33 |
systemic arterial system | 1.83e-08 | 33 |
vessel | 2.63e-08 | 68 |
splanchnic layer of lateral plate mesoderm | 4.62e-08 | 83 |
respiratory system | 5.81e-08 | 74 |
cuboidal epithelium | 4.16e-07 | 4 |
transparent eye structure | 4.16e-07 | 4 |
simple cuboidal epithelium | 4.16e-07 | 4 |
cranial placode | 4.16e-07 | 4 |
lens of camera-type eye | 4.16e-07 | 4 |
epithelium of lens | 4.16e-07 | 4 |
lens placode | 4.16e-07 | 4 |
lens vesicle | 4.16e-07 | 4 |
vasculature | 9.60e-07 | 78 |
vascular system | 9.60e-07 | 78 |