FFCP PHASE1:Hg19::chr1:150849174..150849200,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=405 | |EntrezGene=405 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=700 | |HGNC=700 | ||
|TSSclassifier=strong | |||
|UniProt=A6NGV6,P27540,O43392,Q59ED4,A8K6P0 | |UniProt=A6NGV6,P27540,O43392,Q59ED4,A8K6P0 | ||
|association_with_transcript=0bp_to_ENST00000368975,ENST00000471844,ENST00000515192,uc001evr.1,uc001evs.1,uc001evt.1,uc009wmb.1,uc009wmc.1,uc009wmd.1,uc009wme.1,uc010pcl.1_5end | |association_with_transcript=0bp_to_ENST00000368975,ENST00000471844,ENST00000515192,uc001evr.1,uc001evs.1,uc001evt.1,uc009wmb.1,uc009wmc.1,uc009wmd.1,uc009wme.1,uc010pcl.1_5end | ||
|cluster_id=chr1:150849174..150849200,- | |||
|description=CAGE_peak_2_at_ARNT_5end | |description=CAGE_peak_2_at_ARNT_5end | ||
|id=chr1:150849174..150849200,- | |id=chr1:150849174..150849200,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.77e-28!115;UBERON:0000955!8.73e-15!69;UBERON:0006238!8.73e-15!69;UBERON:0001017!2.81e-14!82;UBERON:0000073!1.04e-13!94;UBERON:0001016!1.04e-13!94;UBERON:0001049!1.28e-13!57;UBERON:0005068!1.28e-13!57;UBERON:0006241!1.28e-13!57;UBERON:0007135!1.28e-13!57;UBERON:0005743!1.75e-13!86;UBERON:0002616!3.19e-12!59;UBERON:0002346!1.38e-11!90;UBERON:0003075!5.28e-11!86;UBERON:0007284!5.28e-11!86;UBERON:0003080!1.57e-09!42;UBERON:0002780!3.76e-09!41;UBERON:0001890!3.76e-09!41;UBERON:0006240!3.76e-09!41;UBERON:0002619!1.42e-07!22;UBERON:0001893!1.99e-07!34;UBERON:0001950!2.15e-07!20;UBERON:0000924!2.84e-07!173;UBERON:0006601!2.84e-07!173;UBERON:0002791!3.08e-07!33;UBERON:0001869!5.83e-07!32;UBERON:0002020!6.04e-07!34;UBERON:0003528!6.04e-07!34;UBERON:0004121!8.18e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!8.77e-28!115;UBERON:0000955!8.73e-15!69;UBERON:0006238!8.73e-15!69;UBERON:0001017!2.81e-14!82;UBERON:0000073!1.04e-13!94;UBERON:0001016!1.04e-13!94;UBERON:0001049!1.28e-13!57;UBERON:0005068!1.28e-13!57;UBERON:0006241!1.28e-13!57;UBERON:0007135!1.28e-13!57;UBERON:0005743!1.75e-13!86;UBERON:0002616!3.19e-12!59;UBERON:0002346!1.38e-11!90;UBERON:0003075!5.28e-11!86;UBERON:0007284!5.28e-11!86;UBERON:0003080!1.57e-09!42;UBERON:0002780!3.76e-09!41;UBERON:0001890!3.76e-09!41;UBERON:0006240!3.76e-09!41;UBERON:0002619!1.42e-07!22;UBERON:0001893!1.99e-07!34;UBERON:0001950!2.15e-07!20;UBERON:0000924!2.84e-07!173;UBERON:0006601!2.84e-07!173;UBERON:0002791!3.08e-07!33;UBERON:0001869!5.83e-07!32;UBERON:0002020!6.04e-07!34;UBERON:0003528!6.04e-07!34;UBERON:0004121!8.18e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.16e-08;114!UBERON:0000073;8.50e-08;53!UBERON:0002616;8.50e-08;53!UBERON:0002619;1.46e-07;22!UBERON:0001017;2.12e-07;75!UBERON:0001950;2.12e-07;20!UBERON:0002780;5.67e-07;41!UBERON:0001890;5.67e-07;41!UBERON:0000955;9.16e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.97e-27,114;UBERON:0000955,2.16e-14,68;UBERON:0006238,2.16e-14,68;UBERON:0001016,4.44e-14,89;UBERON:0001017,6.67e-14,81;UBERON:0001049,3.19e-13,56;UBERON:0005068,3.19e-13,56;UBERON:0006241,3.19e-13,56;UBERON:0007135,3.19e-13,56;UBERON:0000073,3.90e-12,53;UBERON:0002616,3.90e-12,53;UBERON:0002346,3.00e-10,86;UBERON:0003075,1.11e-09,82;UBERON:0007284,1.11e-09,82;UBERON:0002780,3.76e-09,41;UBERON:0001890,3.76e-09,41;UBERON:0003080,3.76e-09,41;UBERON:0006240,3.76e-09,41;UBERON:0002619,1.42e-07,22;UBERON:0001893,1.99e-07,34;UBERON:0001950,2.15e-07,20;UBERON:0001869,5.83e-07,32;UBERON:0003528,6.04e-07,34;UBERON:0002020,6.04e-07,34;UBERON:0002791,7.80e-07,32 | |||
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| ||
|short_description=p2@ARNT | |short_description=p2@ARNT | ||
}} | }} |
Latest revision as of 23:16, 16 September 2015
Short description: | p2@ARNT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARNT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368975, ENST00000471844, ENST00000515192, uc001evr.1, uc001evs.1, uc001evt.1, uc009wmb.1, uc009wmc.1, uc009wmd.1, uc009wme.1, uc010pcl.1_5end |
EntrezGene: | ARNT |
HGNC: | 700 |
UniProt: | A6NGV6P27540O43392Q59ED4A8K6P0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.97e-27 | 114 |
brain | 2.16e-14 | 68 |
future brain | 2.16e-14 | 68 |
nervous system | 4.44e-14 | 89 |
central nervous system | 6.67e-14 | 81 |
neural tube | 3.19e-13 | 56 |
neural rod | 3.19e-13 | 56 |
future spinal cord | 3.19e-13 | 56 |
neural keel | 3.19e-13 | 56 |
regional part of nervous system | 3.90e-12 | 53 |
regional part of brain | 3.90e-12 | 53 |
neurectoderm | 3.00e-10 | 86 |
neural plate | 1.11e-09 | 82 |
presumptive neural plate | 1.11e-09 | 82 |
regional part of forebrain | 3.76e-09 | 41 |
forebrain | 3.76e-09 | 41 |
anterior neural tube | 3.76e-09 | 41 |
future forebrain | 3.76e-09 | 41 |
regional part of cerebral cortex | 1.42e-07 | 22 |
telencephalon | 1.99e-07 | 34 |
neocortex | 2.15e-07 | 20 |
cerebral hemisphere | 5.83e-07 | 32 |
brain grey matter | 6.04e-07 | 34 |
gray matter | 6.04e-07 | 34 |
regional part of telencephalon | 7.80e-07 | 32 |