FFCP PHASE1:Hg19::chr9:21974667..21974672,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1029 | |EntrezGene=1029 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1787 | |HGNC=1787 | ||
|TSSclassifier=strong | |||
|UniProt=P42771 | |UniProt=P42771 | ||
|association_with_transcript=153bp_to_AF115544_5end | |association_with_transcript=153bp_to_AF115544_5end | ||
|cluster_id=chr9:21974667..21974672,- | |||
|description=CAGE_peak_34_at_CDKN2A_5end | |description=CAGE_peak_34_at_CDKN2A_5end | ||
|id=chr9:21974667..21974672,- | |id=chr9:21974667..21974672,- | ||
|ontology_enrichment_celltype=CL:0000317!2.23e-11!2;CL:1000448!2.23e-11!2;CL:0002308!2.23e-11!2;CL:0002140!2.23e-11!2;CL:0000064!2.34e-07!3;CL:0005012!2.34e-07!3;CL:0000067!2.34e-07!3;CL:0002304!2.34e-07!3 | |ontology_enrichment_celltype=CL:0000317!2.23e-11!2;CL:1000448!2.23e-11!2;CL:0002308!2.23e-11!2;CL:0002140!2.23e-11!2;CL:0000064!2.34e-07!3;CL:0005012!2.34e-07!3;CL:0000067!2.34e-07!3;CL:0002304!2.34e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000346;8.69e-18;3!CL:1000428;8.69e-18;3!CL:0002577;8.69e-18;3!CL:0000306;1.06e-13;4!CL:0002222;1.06e-13;4!CL:0002224;1.06e-13;4!CL:0002559;3.10e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,8.00e-18,3;CL:0000346,9.46e-18,3;CL:1000428,9.46e-18,3;CL:0000306,8.82e-14,4;CL:0002222,8.82e-14,4;CL:0002224,8.82e-14,4;CL:0002559,3.26e-11,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!1.95e-10!2;DOID:4556!1.54e-07!3 | |ontology_enrichment_disease=DOID:4929!1.95e-10!2;DOID:4556!1.54e-07!3 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002419!2.23e-11!2;UBERON:0007771!2.23e-11!2;UBERON:0003297!2.23e-11!2;UBERON:0001821!2.23e-11!2;UBERON:0003487!2.23e-11!2;UBERON:0001820!2.23e-11!2;UBERON:0005089!2.23e-11!2;UBERON:0005088!2.23e-11!2;UBERON:0005085!6.26e-10!29;UBERON:0007625!2.20e-07!11;UBERON:0001778!2.34e-07!3;UBERON:0001775!2.34e-07!3 | |ontology_enrichment_uberon=UBERON:0002419!2.23e-11!2;UBERON:0007771!2.23e-11!2;UBERON:0003297!2.23e-11!2;UBERON:0001821!2.23e-11!2;UBERON:0003487!2.23e-11!2;UBERON:0001820!2.23e-11!2;UBERON:0005089!2.23e-11!2;UBERON:0005088!2.23e-11!2;UBERON:0005085!6.26e-10!29;UBERON:0007625!2.20e-07!11;UBERON:0001778!2.34e-07!3;UBERON:0001775!2.34e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;8.69e-18;3!UBERON:0001992;8.69e-18;3!UBERON:0001987;1.06e-13;4!UBERON:0010077;1.06e-13;4!UBERON:0005389;1.06e-13;4!UBERON:0000484;1.06e-13;4!UBERON:0000965;1.06e-13;4!UBERON:0001803;1.06e-13;4!UBERON:0002073;3.10e-11;5!UBERON:0010371;3.58e-07;31!UBERON:0002067;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,9.46e-18,3;UBERON:0001992,9.46e-18,3;UBERON:0010077,8.82e-14,4;UBERON:0005389,8.82e-14,4;UBERON:0000484,8.82e-14,4;UBERON:0002546,8.82e-14,4;UBERON:0000965,8.82e-14,4;UBERON:0001803,8.82e-14,4;UBERON:0003073,8.82e-14,4;UBERON:0005426,8.82e-14,4;UBERON:0001987,1.00e-13,4;UBERON:0004340,1.00e-13,4;UBERON:0002073,3.26e-11,5;UBERON:0005086,3.26e-11,5;UBERON:0003124,2.03e-08,7;UBERON:0000076,1.49e-07,8;UBERON:0005085,1.86e-07,31;UBERON:0002067,8.37e-07,9;UBERON:0004016,8.37e-07,9;UBERON:0010083,8.37e-07,9 | |||
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|short_description=p34@CDKN2A | |short_description=p34@CDKN2A | ||
}} | }} |
Latest revision as of 23:12, 16 September 2015
Short description: | p34@CDKN2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_CDKN2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 153bp_to_AF115544_5end |
EntrezGene: | CDKN2A |
HGNC: | 1787 |
UniProt: | P42771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 8.00e-18 | 3 |
hair follicle dermal papilla cell | 9.46e-18 | 3 |
stem cell of epidermis | 9.46e-18 | 3 |
crystallin accumulating cell | 8.82e-14 | 4 |
vertebrate lens cell | 8.82e-14 | 4 |
lens epithelial cell | 8.82e-14 | 4 |
hair follicle cell | 3.26e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 9.46e-18 | 3 |
papillary layer of dermis | 9.46e-18 | 3 |
cuboidal epithelium | 8.82e-14 | 4 |
transparent eye structure | 8.82e-14 | 4 |
simple cuboidal epithelium | 8.82e-14 | 4 |
cranial placode | 8.82e-14 | 4 |
lens of camera-type eye | 8.82e-14 | 4 |
epithelium of lens | 8.82e-14 | 4 |
lens placode | 8.82e-14 | 4 |
lens vesicle | 8.82e-14 | 4 |
placenta | 1.00e-13 | 4 |
allantois | 1.00e-13 | 4 |
hair follicle | 3.26e-11 | 5 |
hair follicle placode | 3.26e-11 | 5 |
chorion | 2.03e-08 | 7 |
external ectoderm | 1.49e-07 | 8 |
ectodermal placode | 1.86e-07 | 31 |
dermis | 8.37e-07 | 9 |
dermatome | 8.37e-07 | 9 |
future dermis | 8.37e-07 | 9 |