FFCP PHASE1:Hg19::chr12:12224331..12224342,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:12224331..12224342,+ to FFCP PHASE1:Hg19::chr12:12224331..12224342,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79370 | |EntrezGene=79370 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16657 | |HGNC=16657 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZR8 | |UniProt=Q9BZR8 | ||
|association_with_transcript=-59bp_to_ENST00000266434,ENST00000396367,ENST00000396369,NM_030766,NM_138722,uc001rad.2,uc001rae.2_5end | |||
|cluster_id=chr12:12224331..12224342,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_5_at_BCL2L14_5end | |||
|id=chr12:12224331..12224342,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.34e-29!42;CL:0000860!4.58e-27!45;CL:0000738!8.49e-20!140;CL:0002194!1.33e-19!63;CL:0000576!1.33e-19!63;CL:0000040!1.33e-19!63;CL:0000559!1.33e-19!63;CL:0002087!1.96e-19!119;CL:0002009!7.51e-19!65;CL:0000839!3.66e-17!70;CL:0002031!6.42e-17!124;CL:0000557!7.47e-17!71;CL:0000766!1.98e-15!76;CL:0000037!1.10e-14!172;CL:0000566!1.10e-14!172;CL:0002032!1.90e-14!165;CL:0000837!1.90e-14!165;CL:0000988!1.85e-13!182;CL:0000763!1.47e-12!112;CL:0000049!1.47e-12!112;CL:0000453!1.62e-07!5;CL:0000990!6.38e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.59e-68;33!CL:0002057;2.59e-68;33!CL:0000473;1.84e-46;39!CL:0000234;1.84e-46;39!CL:0000576;7.95e-33;48!CL:0000766;5.07e-17;69!CL:0000763;5.23e-12;100!CL:0002087;1.09e-11;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.97e-61,42;CL:0002057,8.97e-61,42;CL:0000473,5.63e-53,48;CL:0000234,5.63e-53,48;CL:0002194,4.74e-42,59;CL:0000576,4.74e-42,59;CL:0000040,4.74e-42,59;CL:0000559,4.74e-42,59;CL:0002009,1.22e-40,61;CL:0000839,1.76e-37,66;CL:0000557,6.63e-37,67;CL:0000766,2.93e-34,72;CL:0000763,1.29e-25,108;CL:0000049,1.29e-25,108;CL:0002087,6.76e-21,115;CL:0000738,5.37e-20,136;CL:0002031,5.89e-20,120;CL:0002032,1.30e-16,161;CL:0000837,1.30e-16,161;CL:0000037,7.66e-16,168;CL:0000988,6.10e-15,177 | |||
|ontology_enrichment_development_v019=CL:0002057;9.97e-45;42!CL:0000049;2.29e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.51e-21!112;UBERON:0002405!2.01e-20!115;UBERON:0002390!1.01e-18!102;UBERON:0003061!1.01e-18!102;UBERON:0002371!2.03e-14!80;UBERON:0001474!4.43e-13!86;UBERON:0004177!1.06e-12!7;UBERON:0004765!1.94e-10!101;UBERON:0001434!1.94e-10!101;UBERON:0002370!8.21e-09!4;UBERON:0005058!8.21e-09!4;UBERON:0009113!8.21e-09!4;UBERON:0003295!8.21e-09!4;UBERON:0005562!8.21e-09!4;UBERON:0006562!6.71e-08!11 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.17e-32,76;UBERON:0001474,6.37e-30,82;UBERON:0004765,3.89e-27,90;UBERON:0002405,3.26e-26,93;UBERON:0002390,8.47e-25,98;UBERON:0003061,8.47e-25,98;UBERON:0001434,2.85e-24,100;UBERON:0002193,2.34e-22,108;UBERON:0002204,7.71e-14,167;UBERON:0003081,4.79e-11,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0,0,4.89077066947656,3.33008918487831,4.7296445977717,0,0,0,0,0,0,0.306083892370903,1.60464513538047,1.27867425159808,3.62836430205388,3.98927315243264,1.70489900213078,2.03146467040009,0.56738522469114,1.24564449799115,1.7587406567972,0.521482918420201,1.52032191293582,2.42159801053347,1.10483290796269,3.16462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.668745981562712,0,0,0,0.445641827540694,0,0.221533894583621,0,1.0247305578054,0.390178042679635,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55888247071511,0.797189041880179,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.655678681511872,0,0,0,0,0,0,0,0.375935671919414,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.516711278688049,0.186224142887574,0,0,0,0,0,0.134704106029175,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0,0,4.89077066947656,3.33008918487831,4.7296445977717,0,0,0,0,0,0,0.306083892370903,1.60464513538047,1.27867425159808,3.62836430205388,3.98927315243264,1.70489900213078,2.03146467040009,0.56738522469114,1.24564449799115,1.7587406567972,0.521482918420201,1.52032191293582,2.42159801053347,1.10483290796269,3.16462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.668745981562712,0,0,0,0.445641827540694,0,0.221533894583621,0,1.0247305578054,0.390178042679635,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55888247071511,0.797189041880179,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.655678681511872,0,0,0,0,0,0,0,0.375935671919414,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.516711278688049,0.186224142887574,0,0,0,0,0,0.134704106029175,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p5@BCL2L14 | |||
}} | }} |
Latest revision as of 23:04, 16 September 2015
Short description: | p5@BCL2L14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BCL2L14_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -59bp_to_ENST00000266434, ENST00000396367, ENST00000396369, NM_030766, NM_138722, uc001rad.2, uc001rae.2_5end |
EntrezGene: | BCL2L14 |
HGNC: | 16657 |
UniProt: | Q9BZR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.97e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.97e-61 | 42 |
defensive cell | 5.63e-53 | 48 |
phagocyte | 5.63e-53 | 48 |
monopoietic cell | 4.74e-42 | 59 |
monocyte | 4.74e-42 | 59 |
monoblast | 4.74e-42 | 59 |
promonocyte | 4.74e-42 | 59 |
macrophage dendritic cell progenitor | 1.22e-40 | 61 |
myeloid lineage restricted progenitor cell | 1.76e-37 | 66 |
granulocyte monocyte progenitor cell | 6.63e-37 | 67 |
myeloid leukocyte | 2.93e-34 | 72 |
myeloid cell | 1.29e-25 | 108 |
common myeloid progenitor | 1.29e-25 | 108 |
nongranular leukocyte | 6.76e-21 | 115 |
leukocyte | 5.37e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 5.89e-20 | 120 |
hematopoietic oligopotent progenitor cell | 1.30e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.30e-16 | 161 |
hematopoietic stem cell | 7.66e-16 | 168 |
hematopoietic cell | 6.10e-15 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.17e-32 | 76 |
bone element | 6.37e-30 | 82 |
skeletal element | 3.89e-27 | 90 |
immune system | 3.26e-26 | 93 |
hematopoietic system | 8.47e-25 | 98 |
blood island | 8.47e-25 | 98 |
skeletal system | 2.85e-24 | 100 |
hemolymphoid system | 2.34e-22 | 108 |
musculoskeletal system | 7.71e-14 | 167 |
lateral plate mesoderm | 4.79e-11 | 203 |