FFCP PHASE1:Hg19::chr2:32288593..32288654,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6683 | |EntrezGene=6683 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11233 | |HGNC=11233 | ||
|TSSclassifier=strong | |||
|UniProt=E5KRP5,Q9UBP0,E5KRP6 | |UniProt=E5KRP5,Q9UBP0,E5KRP6 | ||
|association_with_transcript=-25bp_to_ENST00000345662,NM_014946,NM_199436,uc002roc.2,uc002rod.2_5end | |association_with_transcript=-25bp_to_ENST00000345662,NM_014946,NM_199436,uc002roc.2,uc002rod.2_5end | ||
|cluster_id=chr2:32288593..32288654,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SPAST_5end | |description=CAGE_peak_1_at_SPAST_5end | ||
|id=chr2:32288593..32288654,+ | |id=chr2:32288593..32288654,+ | ||
|ontology_enrichment_celltype=CL:0000133!2.99e-07!59;CL:0000055!7.24e-07!180;CL:0002319!8.42e-07!25 | |ontology_enrichment_celltype=CL:0000133!2.99e-07!59;CL:0000055!7.24e-07!180;CL:0002319!8.42e-07!25 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.44e-07,59;CL:0002319,4.83e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.27e-10;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.52e-37!94;UBERON:0001016!1.52e-37!94;UBERON:0001017!1.83e-34!82;UBERON:0005743!9.67e-34!86;UBERON:0000955!1.53e-28!69;UBERON:0006238!1.53e-28!69;UBERON:0000924!1.75e-27!173;UBERON:0006601!1.75e-27!173;UBERON:0002616!3.65e-27!59;UBERON:0001049!4.17e-27!57;UBERON:0005068!4.17e-27!57;UBERON:0006241!4.17e-27!57;UBERON:0007135!4.17e-27!57;UBERON:0004121!6.54e-26!169;UBERON:0002346!1.05e-25!90;UBERON:0003075!4.53e-24!86;UBERON:0007284!4.53e-24!86;UBERON:0002780!2.61e-21!41;UBERON:0001890!2.61e-21!41;UBERON:0006240!2.61e-21!41;UBERON:0003080!6.94e-20!42;UBERON:0000033!7.61e-20!123;UBERON:0000153!1.27e-19!129;UBERON:0007811!1.27e-19!129;UBERON:0001893!1.13e-18!34;UBERON:0007023!1.32e-18!115;UBERON:0002020!1.89e-18!34;UBERON:0003528!1.89e-18!34;UBERON:0002791!5.04e-18!33;UBERON:0001869!1.96e-17!32;UBERON:0003056!2.28e-17!61;UBERON:0000956!1.65e-13!25;UBERON:0000203!1.65e-13!25;UBERON:0002619!5.11e-13!22;UBERON:0001950!1.00e-11!20;UBERON:0000475!1.58e-10!365;UBERON:0000922!3.56e-09!612;UBERON:0000468!4.30e-09!659;UBERON:0000119!4.85e-09!312;UBERON:0000483!7.07e-09!309;UBERON:0003076!2.24e-08!15;UBERON:0003057!2.24e-08!15;UBERON:0002050!4.44e-08!605;UBERON:0005423!4.44e-08!605;UBERON:0000025!4.85e-08!194;UBERON:0000923!7.18e-08!604;UBERON:0005291!7.18e-08!604;UBERON:0006598!7.18e-08!604;UBERON:0002532!7.18e-08!604;UBERON:0004732!2.09e-07!13;UBERON:0000477!4.22e-07!286;UBERON:0004111!5.10e-07!241;UBERON:0004733!9.54e-07!12;UBERON:0002028!9.54e-07!12;UBERON:0007277!9.54e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.88e-18;34!UBERON:0003528;1.77e-17;34!UBERON:0002020;1.77e-17;34!UBERON:0001869;2.47e-17;32!UBERON:0002791;2.63e-17;32!UBERON:0000073;3.03e-17;53!UBERON:0002616;3.03e-17;53!UBERON:0002780;4.78e-17;41!UBERON:0001890;4.78e-17;41!UBERON:0001017;4.89e-15;75!UBERON:0000956;6.52e-15;25!UBERON:0000203;6.52e-15;25!UBERON:0002619;1.73e-14;22!UBERON:0000955;3.00e-14;68!UBERON:0001016;3.00e-14;83!UBERON:0001950;4.47e-13;20!UBERON:0004732;7.62e-08;13!UBERON:0007023;2.61e-07;114!UBERON:0004733;4.02e-07;12!UBERON:0002028;4.02e-07;12!UBERON:0000125;5.50e-07;9!UBERON:0002308;5.50e-07;9!UBERON:0002420;5.69e-07;9!UBERON:0007245;5.69e-07;9!UBERON:0010009;5.69e-07;9!UBERON:0010011;5.69e-07;9!UBERON:0000454;5.69e-07;9 | |||
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| ||
|short_description=p1@SPAST | |short_description=p1@SPAST | ||
}} | }} |
Latest revision as of 23:03, 16 September 2015
Short description: | p1@SPAST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPAST_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -25bp_to_ENST00000345662, NM_014946, NM_199436, uc002roc.2, uc002rod.2_5end |
EntrezGene: | SPAST |
HGNC: | 11233 |
UniProt: | E5KRP5Q9UBP0E5KRP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.44e-07 | 59 |
neural cell | 4.83e-07 | 25 |