FFCP PHASE1:Hg19::chr9:2158487..2158498,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6595 | |EntrezGene=6595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11098 | |HGNC=11098 | ||
|TSSclassifier=strong | |||
|UniProt=F6XG14 | |UniProt=F6XG14 | ||
|association_with_transcript=2bp_to_ENST00000417599_5end | |association_with_transcript=2bp_to_ENST00000417599_5end | ||
|cluster_id=chr9:2158487..2158498,+ | |||
|description=CAGE_peak_21_at_SMARCA2_5end | |description=CAGE_peak_21_at_SMARCA2_5end | ||
|id=chr9:2158487..2158498,+ | |id=chr9:2158487..2158498,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000817;7.54e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,9.64e-08,63 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.97e-08;1!UBERON:0008801;1.97e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.65e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.47e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000477!8.85e-08!286 | |ontology_enrichment_uberon=UBERON:0000477!8.85e-08!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.70e-15;2!UBERON:0002106;9.30e-11;3!UBERON:0005795;7.54e-09;1!UBERON:0001831;1.97e-08;1!UBERON:0001736;1.97e-08;1!UBERON:0002135;1.97e-08;1!UBERON:0001567;1.97e-08;1!UBERON:0004177;8.76e-07;5!UBERON:0005057;8.76e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,5.32e-15,2;UBERON:0002106,1.48e-10,3;UBERON:0004854,1.48e-10,3;UBERON:0009034,1.48e-10,3;UBERON:0002095,1.48e-10,3;UBERON:0004782,1.48e-10,3;UBERON:0003281,1.48e-10,3;UBERON:0009664,1.48e-10,3;UBERON:0002296,1.48e-10,3;UBERON:0005602,1.48e-10,3;UBERON:0001179,1.48e-10,3;UBERON:0006293,1.48e-10,3;UBERON:0001736,1.71e-08,1;UBERON:0006298,1.71e-08,1;UBERON:0002135,2.84e-08,1;UBERON:0001831,3.28e-08,1;UBERON:0001567,3.28e-08,1;UBERON:0008801,3.28e-08,1 | |||
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| ||
|short_description=p21@SMARCA2 | |short_description=p21@SMARCA2 | ||
}} | }} |
Latest revision as of 22:55, 16 September 2015
Short description: | p21@SMARCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_SMARCA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000417599_5end |
EntrezGene: | SMARCA2 |
HGNC: | 11098 |
UniProt: | F6XG14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 9.64e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 5.32e-15 | 2 |
spleen | 1.48e-10 | 3 |
gastrointestinal system mesentery | 1.48e-10 | 3 |
stomach region | 1.48e-10 | 3 |
mesentery | 1.48e-10 | 3 |
gastrointestinal system serosa | 1.48e-10 | 3 |
mesentery of stomach | 1.48e-10 | 3 |
gut mesentery | 1.48e-10 | 3 |
dorsal mesentery | 1.48e-10 | 3 |
dorsal mesogastrium | 1.48e-10 | 3 |
peritoneal cavity | 1.48e-10 | 3 |
spleen primordium | 1.48e-10 | 3 |
submandibular gland | 1.71e-08 | 1 |
submandibular gland primordium | 1.71e-08 | 1 |
mitral valve | 2.84e-08 | 1 |
parotid gland | 3.28e-08 | 1 |
cheek | 3.28e-08 | 1 |
parotid gland primordium | 3.28e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.47e-07 | 10 |