FFCP PHASE1:Hg19::chr1:246729845..246729891,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163882 | |EntrezGene=163882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26486 | |HGNC=26486 | ||
|TSSclassifier=strong | |||
|UniProt=B1AQM9 | |UniProt=B1AQM9 | ||
|association_with_transcript=29bp_to_ENST00000366511_5end | |association_with_transcript=29bp_to_ENST00000366511_5end | ||
|cluster_id=chr1:246729845..246729891,+ | |||
|description=CAGE_peak_2_at_CNST_5end | |description=CAGE_peak_2_at_CNST_5end | ||
|id=chr1:246729845..246729891,+ | |id=chr1:246729845..246729891,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.88e-15!172;CL:0000566!1.88e-15!172;CL:0002032!5.32e-15!165;CL:0000837!5.32e-15!165;CL:0000542!7.34e-14!53;CL:0000051!7.34e-14!53;CL:0000988!1.32e-13!182;CL:0000838!1.95e-13!52;CL:0000945!1.36e-10!24;CL:0000826!1.36e-10!24;CL:0000738!7.33e-10!140;CL:0000236!2.17e-09!14;CL:0000134!3.07e-09!358;CL:0002031!1.06e-08!124;CL:0002087!1.07e-08!119;CL:0002320!4.04e-08!365;CL:0000219!9.49e-08!390 | |ontology_enrichment_celltype=CL:0000037!1.88e-15!172;CL:0000566!1.88e-15!172;CL:0002032!5.32e-15!165;CL:0000837!5.32e-15!165;CL:0000542!7.34e-14!53;CL:0000051!7.34e-14!53;CL:0000988!1.32e-13!182;CL:0000838!1.95e-13!52;CL:0000945!1.36e-10!24;CL:0000826!1.36e-10!24;CL:0000738!7.33e-10!140;CL:0000236!2.17e-09!14;CL:0000134!3.07e-09!358;CL:0002031!1.06e-08!124;CL:0002087!1.07e-08!119;CL:0002320!4.04e-08!365;CL:0000219!9.49e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000945;9.25e-11;24!CL:0000542;3.53e-09;53!CL:0000236;4.50e-09;13 | |ontology_enrichment_celltype_v019=CL:0000945;9.25e-11;24!CL:0000542;3.53e-09;53!CL:0000236;4.50e-09;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.43e-15,168;CL:0002032,4.01e-15,161;CL:0000837,4.01e-15,161;CL:0000988,3.74e-14,177;CL:0000542,7.29e-14,53;CL:0000051,7.29e-14,53;CL:0000838,1.93e-13,52;CL:0000945,1.35e-10,24;CL:0000826,1.35e-10,24;CL:0000738,6.04e-10,136;CL:0000134,1.24e-09,354;CL:0000236,2.17e-09,14;CL:0002087,8.63e-09,115;CL:0002031,8.66e-09,120;CL:0002320,1.75e-08,361;CL:0000219,4.48e-08,386 | |||
|ontology_enrichment_development_v019=CL:0000051;3.53e-09;53 | |ontology_enrichment_development_v019=CL:0000051;3.53e-09;53 | ||
|ontology_enrichment_disease=DOID:8692!2.75e-07!31;DOID:2531!3.80e-07!51;DOID:0060083!3.80e-07!51 | |ontology_enrichment_disease=DOID:8692!2.75e-07!31;DOID:2531!3.80e-07!51;DOID:0060083!3.80e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.85e-07;31 | |ontology_enrichment_disease_v019=DOID:8692;4.85e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,2.75e-07,31;DOID:2531,3.79e-07,51;DOID:0060083,3.79e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.38e-07!375 | |ontology_enrichment_uberon=UBERON:0002384!1.38e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.24e-08,371 | |||
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| ||
|short_description=p2@CNST | |short_description=p2@CNST | ||
}} | }} |
Latest revision as of 22:53, 16 September 2015
Short description: | p2@CNST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CNST_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000366511_5end |
EntrezGene: | CNST |
HGNC: | 26486 |
UniProt: | B1AQM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.43e-15 | 168 |
hematopoietic oligopotent progenitor cell | 4.01e-15 | 161 |
hematopoietic multipotent progenitor cell | 4.01e-15 | 161 |
hematopoietic cell | 3.74e-14 | 177 |
lymphocyte | 7.29e-14 | 53 |
common lymphoid progenitor | 7.29e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.93e-13 | 52 |
lymphocyte of B lineage | 1.35e-10 | 24 |
pro-B cell | 1.35e-10 | 24 |
leukocyte | 6.04e-10 | 136 |
mesenchymal cell | 1.24e-09 | 354 |
B cell | 2.17e-09 | 14 |
nongranular leukocyte | 8.63e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.66e-09 | 120 |
connective tissue cell | 1.75e-08 | 361 |
motile cell | 4.48e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.24e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.75e-07 | 31 |
hematologic cancer | 3.79e-07 | 51 |
immune system cancer | 3.79e-07 | 51 |