FFCP PHASE1:Hg19::chr20:49639612..49639615,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:49639612..49639615,-
|short_description=p2@KCNG1
|description=CAGE_peak_2_at_KCNG1_5end
|association_with_transcript=1bp_to_ENST00000396017,uc002xwb.2_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3755 | |EntrezGene=3755 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6248 | |HGNC=6248 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UIX4 | |UniProt=Q9UIX4 | ||
|association_with_transcript=1bp_to_ENST00000396017,uc002xwb.2_5end | |||
|cluster_id=chr20:49639612..49639615,- | |||
|description=CAGE_peak_2_at_KCNG1_5end | |||
|id=chr20:49639612..49639615,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.15e-11;3!CL:0000067;1.15e-11;3!CL:0005012;1.15e-11;3!CL:0002304;1.15e-11;3!CL:0002591;2.24e-09;1!CL:0000062;1.39e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.36e-12,3;CL:0000067,8.36e-12,3;CL:0005012,8.36e-12,3;CL:0002304,8.36e-12,3;CL:0002591,3.00e-09,1;CL:0000062,4.71e-07,11;CL:0000375,4.71e-07,11;CL:0000335,4.71e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.94e-10;1!CL:0000335;4.18e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;2.24e-09;1!DOID:4235;2.24e-09;1!DOID:3571;2.24e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.43e-09,1;DOID:3347,1.84e-09,1;DOID:4235,5.28e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.15e-11;3!UBERON:0001775;1.15e-11;3!UBERON:0000488;5.71e-09;4!UBERON:0007625;4.18e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,8.36e-12,3;UBERON:0001775,8.36e-12,3;UBERON:0000488,4.51e-09,4;UBERON:0003498,2.68e-07,5;UBERON:0005985,2.68e-07,5;UBERON:0007625,3.02e-07,11 | |||
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| ||
|short_description=p2@KCNG1 | |||
}} | }} |
Latest revision as of 22:48, 16 September 2015
Short description: | p2@KCNG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000396017, uc002xwb.2_5end |
EntrezGene: | KCNG1 |
HGNC: | 6248 |
UniProt: | Q9UIX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.36e-12 | 3 |
ciliated epithelial cell | 8.36e-12 | 3 |
multi-ciliated epithelial cell | 8.36e-12 | 3 |
non-pigmented ciliary epithelial cell | 8.36e-12 | 3 |
smooth muscle cell of the pulmonary artery | 3.00e-09 | 1 |
osteoblast | 4.71e-07 | 11 |
osteoprogenitor cell | 4.71e-07 | 11 |
mesenchyme condensation cell | 4.71e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 8.36e-12 | 3 |
ciliary body | 8.36e-12 | 3 |
atypical epithelium | 4.51e-09 | 4 |
heart blood vessel | 2.68e-07 | 5 |
coronary vessel | 2.68e-07 | 5 |
pigment epithelium of eye | 3.02e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.43e-09 | 1 |
osteosarcoma | 1.84e-09 | 1 |
spindle cell sarcoma | 5.28e-09 | 1 |