FFCP PHASE1:Hg19::chr1:246469406..246469412,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64754 | |EntrezGene=64754 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15513 | |HGNC=15513 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-95bp_to_ENST00000492487_5end | |association_with_transcript=-95bp_to_ENST00000492487_5end | ||
|cluster_id=chr1:246469406..246469412,- | |||
|coexpression_cluster_id=C137 | |coexpression_cluster_id=C137 | ||
|description=CAGE_peak_18_at_SMYD3_5end | |description=CAGE_peak_18_at_SMYD3_5end | ||
|id=chr1:246469406..246469412,- | |id=chr1:246469406..246469412,- | ||
|ontology_enrichment_celltype=CL:0000319!2.78e-26!1;CL:0000159!7.30e-14!2 | |ontology_enrichment_celltype=CL:0000319!2.78e-26!1;CL:0000159!7.30e-14!2 | ||
|ontology_enrichment_celltype_v019=CL:0000319;2.55e-98;1!CL:0000159;4.52e-50;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,2.55e-98,1;CL:0000159,4.52e-50,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3030!2.78e-26!1;DOID:4556!1.01e-09!3 | |ontology_enrichment_disease=DOID:3030!2.78e-26!1;DOID:4556!1.01e-09!3 | ||
|ontology_enrichment_disease_v019=DOID:3030;2.55e-98;1!DOID:4556;4.27e-34;3!DOID:3908;4.21e-21;5!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.55e-98,1;DOID:4556,4.27e-34,3;DOID:3908,4.21e-21,5;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p18@SMYD3 | |short_description=p18@SMYD3 | ||
}} | }} |
Latest revision as of 22:38, 16 September 2015
Short description: | p18@SMYD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SMYD3_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | -95bp_to_ENST00000492487_5end |
EntrezGene: | SMYD3 |
HGNC: | 15513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 2.55e-98 | 1 |
seromucus secreting cell | 4.52e-50 | 2 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.55e-98 | 1 |
lung large cell carcinoma | 4.27e-34 | 3 |
non-small cell lung carcinoma | 4.21e-21 | 5 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |