FFCP PHASE1:Hg19::chr19:21688458..21688467,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:21688458..21688467,+
|short_description=p3@ZNF429
|description=CAGE_peak_3_at_ZNF429_5end
|association_with_transcript=21bp_to_ENST00000358491,NM_00100141...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=353088 | |EntrezGene=353088 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20817 | |HGNC=20817 | ||
|TSSclassifier=strong | |||
|UniProt=Q86V71 | |UniProt=Q86V71 | ||
|association_with_transcript=21bp_to_ENST00000358491,NM_001001415,uc002nqd.1,uc010ecu.1_5end | |||
|cluster_id=chr19:21688458..21688467,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_ZNF429_5end | |||
|id=chr19:21688458..21688467,+ | |||
|ontology_enrichment_celltype=CL:0000094!4.48e-11!8;CL:0000766!5.50e-11!76;CL:0002057!3.02e-09!42;CL:0000860!2.83e-08!45;CL:0000738!3.28e-08!140;CL:0000081!1.34e-07!11;CL:0000763!3.11e-07!112;CL:0000049!3.11e-07!112;CL:0002032!7.50e-07!165;CL:0000837!7.50e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.79e-74;8!CL:0000081;3.31e-54;11!CL:0000775;1.35e-50;3!CL:0000771;1.31e-34;2!CL:0000226;9.37e-07;3!CL:0000767;9.37e-07;3!CL:0000842;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.30e-74,8;CL:0000081,2.64e-54,11;CL:0000775,1.35e-50,3;CL:0000771,1.31e-34,2;CL:0000766,4.52e-08,72;CL:0000763,4.11e-07,108;CL:0000049,4.11e-07,108;CL:0000767,8.15e-07,3;CL:0000226,8.62e-07,3;CL:0000842,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.12e-17;1!UBERON:0003056;9.37e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.50e-11!115;UBERON:0005743!1.12e-07!86;UBERON:0001017!1.16e-07!82;UBERON:0001049!1.26e-07!57;UBERON:0005068!1.26e-07!57;UBERON:0006241!1.26e-07!57;UBERON:0007135!1.26e-07!57;UBERON:0000073!1.43e-07!94;UBERON:0001016!1.43e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.12e-17;1!UBERON:0001785;1.12e-17;1!UBERON:0002464;1.12e-17;1!UBERON:0004904;1.12e-17;1!UBERON:0001021;1.12e-17;1!UBERON:0003714;1.64e-09;2!UBERON:0005162;1.64e-09;2!UBERON:0000122;1.64e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.03e-17,1;UBERON:0001785,1.03e-17,1;UBERON:0002464,1.03e-17,1;UBERON:0004904,1.03e-17,1;UBERON:0001021,1.03e-17,1;UBERON:0003902,1.03e-17,1;UBERON:0005425,1.03e-17,1;UBERON:0003714,1.57e-09,2;UBERON:0005162,1.57e-09,2;UBERON:0000122,1.57e-09,2 | |||
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| ||
|short_description=p3@ZNF429 | |||
}} | }} |
Latest revision as of 22:34, 16 September 2015
Short description: | p3@ZNF429 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF429_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 21bp_to_ENST00000358491, NM_001001415, uc002nqd.1, uc010ecu.1_5end |
EntrezGene: | ZNF429 |
HGNC: | 20817 |
UniProt: | Q86V71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.30e-74 | 8 |
blood cell | 2.64e-54 | 11 |
neutrophil | 1.35e-50 | 3 |
eosinophil | 1.31e-34 | 2 |
myeloid leukocyte | 4.52e-08 | 72 |
myeloid cell | 4.11e-07 | 108 |
common myeloid progenitor | 4.11e-07 | 108 |
basophil | 8.15e-07 | 3 |
single nucleate cell | 8.62e-07 | 3 |
mononuclear cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.03e-17 | 1 |
cranial nerve | 1.03e-17 | 1 |
nerve trunk | 1.03e-17 | 1 |
nerve connecting eye with brain | 1.03e-17 | 1 |
nerve | 1.03e-17 | 1 |
retinal neural layer | 1.03e-17 | 1 |
presumptive neural retina | 1.03e-17 | 1 |
neural tissue | 1.57e-09 | 2 |
multi cell component structure | 1.57e-09 | 2 |
neuron projection bundle | 1.57e-09 | 2 |