FFCP PHASE1:Hg19::chr5:170736216..170736238,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30012 | |EntrezGene=30012 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13532 | |HGNC=13532 | ||
|TSSclassifier=strong | |||
|UniProt=O43711 | |UniProt=O43711 | ||
|association_with_transcript=-49bp_to_ENST00000296921,NM_021025,uc003mbf.2_5end | |association_with_transcript=-49bp_to_ENST00000296921,NM_021025,uc003mbf.2_5end | ||
|cluster_id=chr5:170736216..170736238,+ | |||
|coexpression_cluster_id=C46 | |coexpression_cluster_id=C46 | ||
|description=CAGE_peak_2_at_TLX3_5end | |description=CAGE_peak_2_at_TLX3_5end | ||
|id=chr5:170736216..170736238,+ | |id=chr5:170736216..170736238,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.48e-10!254;CL:0002150!2.18e-07!3;CL:0000861!2.18e-07!3;CL:0000039!9.72e-07!7;CL:0000586!9.72e-07!7 | |ontology_enrichment_celltype=CL:0000066!2.48e-10!254;CL:0002150!2.18e-07!3;CL:0000861!2.18e-07!3;CL:0000039!9.72e-07!7;CL:0000586!9.72e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000123;3.18e-09;2!CL:0000242;3.18e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.18e-09,2;CL:0000066,6.19e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.02e-14;29!UBERON:0006215;7.66e-13;3 | |||
|ontology_enrichment_disease=DOID:305!1.14e-17!106;DOID:0050687!6.79e-17!143;DOID:162!2.22e-12!235;DOID:14566!8.01e-12!239;DOID:5409!1.74e-07!4 | |ontology_enrichment_disease=DOID:305!1.14e-17!106;DOID:0050687!6.79e-17!143;DOID:162!2.22e-12!235;DOID:14566!8.01e-12!239;DOID:5409!1.74e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:305;9.25e-09;106!DOID:4468;1.97e-08;2!DOID:154;3.08e-08;2!DOID:4236;3.08e-08;2!DOID:4362;5.32e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.14e-23,143;DOID:305,1.14e-22,106;DOID:162,8.47e-21,235;DOID:14566,3.69e-20,239;DOID:4468,2.25e-08,2;DOID:154,2.81e-08,2;DOID:4236,2.81e-08,2;DOID:4362,4.12e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.54e-19!9;UBERON:0003076!2.18e-19!15;UBERON:0003057!2.18e-19!15;UBERON:0004733!9.47e-18!12;UBERON:0002028!9.47e-18!12;UBERON:0007277!9.47e-18!12;UBERON:0004732!3.55e-16!13;UBERON:0002680!3.77e-13!9;UBERON:0001895!3.77e-13!9;UBERON:0010092!3.77e-13!9;UBERON:0002037!5.28e-12!6;UBERON:0006215!5.28e-12!6;UBERON:0000063!1.66e-09!97;UBERON:0000065!6.68e-09!53;UBERON:0008947!8.87e-09!38;UBERON:0003258!8.87e-09!38;UBERON:0001557!4.26e-08!19;UBERON:0000473!1.06e-07!8;UBERON:0001004!8.32e-07!72 | |ontology_enrichment_uberon=UBERON:0001737!1.54e-19!9;UBERON:0003076!2.18e-19!15;UBERON:0003057!2.18e-19!15;UBERON:0004733!9.47e-18!12;UBERON:0002028!9.47e-18!12;UBERON:0007277!9.47e-18!12;UBERON:0004732!3.55e-16!13;UBERON:0002680!3.77e-13!9;UBERON:0001895!3.77e-13!9;UBERON:0010092!3.77e-13!9;UBERON:0002037!5.28e-12!6;UBERON:0006215!5.28e-12!6;UBERON:0000063!1.66e-09!97;UBERON:0000065!6.68e-09!53;UBERON:0008947!8.87e-09!38;UBERON:0003258!8.87e-09!38;UBERON:0001557!4.26e-08!19;UBERON:0000473!1.06e-07!8;UBERON:0001004!8.32e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.21e-34;9!UBERON:0001557;6.21e-34;9!UBERON:0000072;1.46e-09;37!UBERON:0000065;1.84e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.34e-34,9;UBERON:0001557,3.92e-15,19;UBERON:0008947,5.66e-10,38;UBERON:0003258,5.66e-10,38;UBERON:0000072,1.24e-07,47 | |||
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| ||
|short_description=p2@TLX3 | |short_description=p2@TLX3 | ||
}} | }} |
Latest revision as of 22:31, 16 September 2015
Short description: | p2@TLX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TLX3_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | -49bp_to_ENST00000296921, NM_021025, uc003mbf.2_5end |
EntrezGene: | TLX3 |
HGNC: | 13532 |
UniProt: | O43711 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.18e-09 | 2 |
epithelial cell | 6.19e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.34e-34 | 9 |
upper respiratory tract | 3.92e-15 | 19 |
respiratory primordium | 5.66e-10 | 38 |
endoderm of foregut | 5.66e-10 | 38 |
segment of respiratory tract | 1.24e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.14e-23 | 143 |
carcinoma | 1.14e-22 | 106 |
cancer | 8.47e-21 | 235 |
disease of cellular proliferation | 3.69e-20 | 239 |
clear cell adenocarcinoma | 2.25e-08 | 2 |
mixed cell type cancer | 2.81e-08 | 2 |
carcinosarcoma | 2.81e-08 | 2 |
cervical cancer | 4.12e-07 | 5 |