FFCP PHASE1:Hg19::chr4:176734316..176734327,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2823 | |EntrezGene=2823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4460 | |HGNC=4460 | ||
|TSSclassifier=strong | |||
|UniProt=P51674,Q86YB0 | |UniProt=P51674,Q86YB0 | ||
|association_with_transcript=-134bp_to_NM_201591,uc003iuf.2_5end | |association_with_transcript=-134bp_to_NM_201591,uc003iuf.2_5end | ||
|cluster_id=chr4:176734316..176734327,- | |||
|coexpression_cluster_id=C1259 | |||
|description=CAGE_peak_25_at_GPM6A_5end | |description=CAGE_peak_25_at_GPM6A_5end | ||
|id=chr4:176734316..176734327,- | |id=chr4:176734316..176734327,- | ||
|ontology_enrichment_celltype=CL:0000540!1.24e-08!6;CL:0000031!1.24e-08!6;CL:0000404!1.24e-08!6 | |ontology_enrichment_celltype=CL:0000540!1.24e-08!6;CL:0000031!1.24e-08!6;CL:0000404!1.24e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;8.08e-09;6!CL:0000404;8.08e-09;6!CL:0002319;3.03e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.77e-09,6;CL:0000031,6.77e-09,6;CL:0000404,6.77e-09,6;CL:0002319,2.61e-07,25;CL:0000047,7.01e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.43e-10;10!CL:0000031;8.08e-09;6!UBERON:0006601;3.02e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.21e-71!32;UBERON:0002619!9.16e-70!22;UBERON:0001017!5.12e-69!82;UBERON:0001893!5.05e-67!34;UBERON:0002020!8.81e-67!34;UBERON:0003528!8.81e-67!34;UBERON:0005743!1.40e-65!86;UBERON:0002791!9.77e-63!33;UBERON:0000956!3.00e-61!25;UBERON:0000203!3.00e-61!25;UBERON:0001950!1.40e-60!20;UBERON:0002780!3.43e-60!41;UBERON:0001890!3.43e-60!41;UBERON:0006240!3.43e-60!41;UBERON:0000955!1.51e-59!69;UBERON:0006238!1.51e-59!69;UBERON:0000073!7.01e-59!94;UBERON:0001016!7.01e-59!94;UBERON:0003080!1.13e-58!42;UBERON:0001049!2.67e-54!57;UBERON:0005068!2.67e-54!57;UBERON:0006241!2.67e-54!57;UBERON:0007135!2.67e-54!57;UBERON:0002616!2.66e-52!59;UBERON:0003075!2.98e-40!86;UBERON:0007284!2.98e-40!86;UBERON:0003056!4.02e-39!61;UBERON:0002346!3.20e-38!90;UBERON:0000033!1.31e-33!123;UBERON:0000153!8.91e-32!129;UBERON:0007811!8.91e-32!129;UBERON:0000200!4.24e-31!6;UBERON:0004121!2.83e-30!169;UBERON:0000924!1.97e-29!173;UBERON:0006601!1.97e-29!173;UBERON:0007023!1.69e-26!115;UBERON:0001871!1.81e-23!7;UBERON:0001872!6.49e-17!5;UBERON:0000349!9.02e-17!5;UBERON:0002771!1.97e-16!3;UBERON:0000025!3.51e-12!194;UBERON:0000369!7.48e-12!4;UBERON:0002435!7.48e-12!4;UBERON:0000204!7.48e-12!4;UBERON:0010082!7.48e-12!4;UBERON:0001870!8.37e-12!2;UBERON:0001954!3.29e-11!2;UBERON:0003022!3.29e-11!2;UBERON:0002421!3.29e-11!2;UBERON:0002600!3.29e-11!2;UBERON:0002360!7.49e-11!2;UBERON:0000094!7.49e-11!2;UBERON:0007645!7.49e-11!2;UBERON:0002021!6.15e-10!5;UBERON:0000064!3.42e-09!219;UBERON:0002420!3.42e-09!9;UBERON:0007245!3.42e-09!9;UBERON:0010009!3.42e-09!9;UBERON:0010011!3.42e-09!9;UBERON:0000454!3.42e-09!9;UBERON:0002308!4.85e-09!9;UBERON:0000125!4.85e-09!9;UBERON:0004111!9.70e-09!241;UBERON:0000475!6.26e-08!365;UBERON:0005383!1.79e-07!3;UBERON:0005382!1.79e-07!3;UBERON:0000477!2.65e-07!286;UBERON:0000483!5.05e-07!309;UBERON:0009663!5.69e-07!7;UBERON:0000119!6.70e-07!312;UBERON:0003112!8.67e-07!1;UBERON:0000032!8.67e-07!1;UBERON:0005253!8.67e-07!1;UBERON:0003128!8.67e-07!1;UBERON:0002241!8.67e-07!1;UBERON:0001703!8.67e-07!1;UBERON:0004761!8.67e-07!1;UBERON:0009617!8.67e-07!1;UBERON:0002702!9.15e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.10e-44;20!UBERON:0002619;5.51e-40;22!UBERON:0000956;2.86e-35;25!UBERON:0000203;2.86e-35;25!UBERON:0001870;3.19e-35;3!UBERON:0000200;4.68e-31;6!UBERON:0001869;6.17e-30;32!UBERON:0001893;1.94e-27;34!UBERON:0002791;4.90e-25;32!UBERON:0002702;4.22e-24;2!UBERON:0003528;5.36e-24;34!UBERON:0002020;5.36e-24;34!UBERON:0002780;4.04e-16;41!UBERON:0001890;4.04e-16;41!UBERON:0001871;1.21e-15;6!UBERON:0000955;6.66e-15;68!UBERON:0002022;6.05e-13;1!UBERON:0003112;6.05e-13;1!UBERON:0011158;6.05e-13;1!UBERON:0007190;6.05e-13;1!UBERON:0003128;6.05e-13;1!UBERON:0001703;6.05e-13;1!UBERON:0002241;6.05e-13;1!UBERON:0000073;2.04e-12;53!UBERON:0002616;2.04e-12;53!UBERON:0001017;6.36e-11;75!UBERON:0001016;1.74e-10;83!UBERON:0002771;4.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.09e-43,20;UBERON:0002619,8.16e-40,22;UBERON:0001870,3.60e-35,3;UBERON:0000956,4.04e-35,25;UBERON:0000203,4.04e-35,25;UBERON:0001869,7.75e-34,32;UBERON:0001893,7.68e-32,34;UBERON:0000200,9.45e-31,6;UBERON:0001017,7.74e-30,81;UBERON:0002791,1.77e-27,32;UBERON:0001016,9.56e-27,89;UBERON:0000955,1.75e-26,68;UBERON:0006238,1.75e-26,68;UBERON:0002780,2.39e-26,41;UBERON:0001890,2.39e-26,41;UBERON:0003080,2.39e-26,41;UBERON:0006240,2.39e-26,41;UBERON:0003528,7.45e-26,34;UBERON:0002020,7.45e-26,34;UBERON:0002702,4.23e-24,2;UBERON:0000073,3.10e-20,53;UBERON:0002616,3.10e-20,53;UBERON:0001049,4.16e-19,56;UBERON:0005068,4.16e-19,56;UBERON:0006241,4.16e-19,56;UBERON:0007135,4.16e-19,56;UBERON:0003056,1.81e-17,61;UBERON:0001871,1.44e-15,6;UBERON:0004121,2.96e-13,171;UBERON:0000924,2.96e-13,171;UBERON:0006601,2.96e-13,171;UBERON:0003112,4.23e-13,1;UBERON:0011158,4.23e-13,1;UBERON:0003128,4.23e-13,1;UBERON:0001703,4.23e-13,1;UBERON:0002241,4.23e-13,1;UBERON:0004761,4.23e-13,1;UBERON:0009617,4.23e-13,1;UBERON:0011216,6.05e-13,223;UBERON:0002022,8.64e-13,1;UBERON:0003075,9.75e-13,82;UBERON:0007284,9.75e-13,82;UBERON:0007190,1.09e-12,1;UBERON:0002346,4.29e-12,86;UBERON:0010371,8.43e-10,104;UBERON:0010314,3.94e-09,132;UBERON:0005253,3.48e-07,2;UBERON:0002771,5.28e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,3.51784157202132,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927680981618513,3.99227596002388,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75465485467441,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45614830698521,0,0,0,0,0,0,0,0,0,0,1.9026588850306,4.39331954511799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,1.27574068981852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.09823638411767,1.3771002377715,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,0,0,0.41023272848151,4.03314713954749,0.276629009856872,1.77623210195036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08060135389431,0,0.413373593002368,0.887821342714695,2.7348740450911,0,0,0,0,0,0,0,0,0,0,0,0,0.789273282754189,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63179576458195,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,3.51784157202132,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927680981618513,3.99227596002388,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75465485467441,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45614830698521,0,0,0,0,0,0,0,0,0,0,1.9026588850306,4.39331954511799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,1.27574068981852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.09823638411767,1.3771002377715,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,0,0,0.41023272848151,4.03314713954749,0.276629009856872,1.77623210195036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08060135389431,0,0.413373593002368,0.887821342714695,2.7348740450911,0,0,0,0,0,0,0,0,0,0,0,0,0.789273282754189,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63179576458195,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p25@GPM6A | |short_description=p25@GPM6A | ||
}} | }} |
Latest revision as of 22:01, 16 September 2015
Short description: | p25@GPM6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_GPM6A_5end |
Coexpression cluster: | C1259_Neurons_parietal_occipital_temporal_brain_duodenum_glioblastoma |
Association with transcript: | -134bp_to_NM_201591, uc003iuf.2_5end |
EntrezGene: | GPM6A |
HGNC: | 4460 |
UniProt: | P51674Q86YB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.77e-09 | 6 |
neuroblast | 6.77e-09 | 6 |
electrically signaling cell | 6.77e-09 | 6 |
neural cell | 2.61e-07 | 25 |
neuronal stem cell | 7.01e-07 | 8 |