FFCP PHASE1:Hg19::chr12:121735586..121735631,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:121735586..121735631,- to FFCP PHASE1:Hg19::chr12:121735586..121735631,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10645 | |EntrezGene=10645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1470 | |HGNC=1470 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4I7 | |UniProt=F5H4I7 | ||
|association_with_transcript=-220bp_to_ENST00000543477_5end | |||
|cluster_id=chr12:121735586..121735631,- | |||
|description=CAGE_peak_2_at_CAMKK2_5end | |||
|id=chr12:121735586..121735631,- | |||
|ontology_enrichment_celltype=CL:0002057!1.75e-20!42;CL:0000860!7.07e-18!45;CL:0000766!1.24e-10!76;CL:0000839!1.77e-10!70;CL:0002194!2.92e-10!63;CL:0000576!2.92e-10!63;CL:0000040!2.92e-10!63;CL:0000559!2.92e-10!63;CL:0000557!1.39e-09!71;CL:0002009!1.82e-09!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.19e-33;33!CL:0002057;5.19e-33;33!CL:0000473;1.23e-23;39!CL:0000234;1.23e-23;39!CL:0000576;7.76e-19;48!CL:0000766;5.21e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.22e-34,42;CL:0002057,3.22e-34,42;CL:0000473,4.44e-31,48;CL:0000234,4.44e-31,48;CL:0002194,3.88e-23,59;CL:0000576,3.88e-23,59;CL:0000040,3.88e-23,59;CL:0000559,3.88e-23,59;CL:0002009,4.06e-22,61;CL:0000766,1.61e-20,72;CL:0000839,7.68e-20,66;CL:0000557,1.99e-19,67;CL:0000763,5.95e-11,108;CL:0000049,5.95e-11,108;CL:0002087,5.99e-09,115;CL:0002031,2.81e-08,120;CL:0000738,8.45e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;3.92e-25;42!UBERON:0006215;2.00e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.02e-13!32;UBERON:0001893!2.04e-13!34;UBERON:0002020!1.06e-12!34;UBERON:0003528!1.06e-12!34;UBERON:0002791!1.08e-12!33;UBERON:0001950!2.54e-12!20;UBERON:0002780!3.95e-12!41;UBERON:0001890!3.95e-12!41;UBERON:0006240!3.95e-12!41;UBERON:0001049!4.94e-12!57;UBERON:0005068!4.94e-12!57;UBERON:0006241!4.94e-12!57;UBERON:0007135!4.94e-12!57;UBERON:0002619!7.83e-12!22;UBERON:0003080!1.60e-11!42;UBERON:0005743!5.85e-11!86;UBERON:0003056!8.87e-11!61;UBERON:0002346!1.13e-10!90;UBERON:0001017!1.43e-10!82;UBERON:0000922!1.77e-10!612;UBERON:0003075!2.64e-10!86;UBERON:0007284!2.64e-10!86;UBERON:0000073!3.38e-10!94;UBERON:0001016!3.38e-10!94;UBERON:0000956!4.64e-10!25;UBERON:0000203!4.64e-10!25;UBERON:0002616!6.79e-10!59;UBERON:0000062!7.30e-10!511;UBERON:0007023!1.78e-09!115;UBERON:0002371!1.95e-09!80;UBERON:0000923!4.81e-09!604;UBERON:0005291!4.81e-09!604;UBERON:0006598!4.81e-09!604;UBERON:0002532!4.81e-09!604;UBERON:0002050!6.58e-09!605;UBERON:0005423!6.58e-09!605;UBERON:0000955!8.74e-09!69;UBERON:0006238!8.74e-09!69;UBERON:0000480!1.49e-08!626;UBERON:0000467!2.41e-08!625;UBERON:0000468!2.60e-08!659;UBERON:0001474!4.21e-08!86;UBERON:0002390!8.93e-08!102;UBERON:0003061!8.93e-08!102;UBERON:0004765!9.45e-08!101;UBERON:0001434!9.45e-08!101;UBERON:0000033!5.40e-07!123;UBERON:0000924!9.19e-07!173;UBERON:0006601!9.19e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.24e-24;20!UBERON:0001869;1.06e-22;32!UBERON:0002619;4.37e-22;22!UBERON:0001893;9.59e-22;34!UBERON:0002791;1.64e-20;32!UBERON:0003528;3.03e-19;34!UBERON:0002020;3.03e-19;34!UBERON:0000956;5.23e-19;25!UBERON:0000203;5.23e-19;25!UBERON:0000200;9.04e-14;6!UBERON:0002780;2.54e-13;41!UBERON:0001890;2.54e-13;41!UBERON:0000073;1.32e-10;53!UBERON:0002616;1.32e-10;53!UBERON:0000955;1.07e-09;68!UBERON:0001017;4.19e-09;75!UBERON:0001872;7.94e-08;5!UBERON:0002021;8.08e-08;5!UBERON:0001870;8.74e-08;3!UBERON:0001016;7.28e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.55e-26,32;UBERON:0001950,6.62e-25,20;UBERON:0001893,5.88e-24,34;UBERON:0002791,4.98e-23,32;UBERON:0002619,2.47e-22,22;UBERON:0003528,2.25e-21,34;UBERON:0002020,2.25e-21,34;UBERON:0002780,4.75e-21,41;UBERON:0001890,4.75e-21,41;UBERON:0003080,4.75e-21,41;UBERON:0006240,4.75e-21,41;UBERON:0000073,1.78e-20,53;UBERON:0002616,1.78e-20,53;UBERON:0000956,3.18e-19,25;UBERON:0000203,3.18e-19,25;UBERON:0001049,5.26e-19,56;UBERON:0005068,5.26e-19,56;UBERON:0006241,5.26e-19,56;UBERON:0007135,5.26e-19,56;UBERON:0002371,1.53e-17,76;UBERON:0000955,4.59e-17,68;UBERON:0006238,4.59e-17,68;UBERON:0001017,6.29e-17,81;UBERON:0001474,1.14e-15,82;UBERON:0001016,1.56e-15,89;UBERON:0002390,2.25e-15,98;UBERON:0003061,2.25e-15,98;UBERON:0000200,1.19e-13,6;UBERON:0003056,1.40e-13,61;UBERON:0004765,1.43e-13,90;UBERON:0002193,3.84e-13,108;UBERON:0002405,6.98e-13,93;UBERON:0001434,1.83e-12,100;UBERON:0003075,6.13e-12,82;UBERON:0007284,6.13e-12,82;UBERON:0002346,4.58e-11,86;UBERON:0010371,1.51e-10,104;UBERON:0007023,2.99e-09,114;UBERON:0000922,2.58e-08,592;UBERON:0001872,5.22e-08,5;UBERON:0002021,7.72e-08,5;UBERON:0000923,8.25e-08,560;UBERON:0010316,8.25e-08,560;UBERON:0005291,8.25e-08,560;UBERON:0006598,8.25e-08,560;UBERON:0010317,8.25e-08,560;UBERON:0002532,8.25e-08,560;UBERON:0001870,1.01e-07,3;UBERON:0002050,1.28e-07,564;UBERON:0005423,2.58e-07,581;UBERON:0004121,3.03e-07,171;UBERON:0000924,3.03e-07,171;UBERON:0006601,3.03e-07,171 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.534893840235659,0.246301768349837,0.708397031823113,0.393364276848904,0,1.23852898652861,0,0,0,0,0,0,1.10799081706375,0.601633342410425,1.08505435357926,0,0,0.257575567634187,1.30858414901608,3.02300754951048,1.4555043671269,1.85943229524548,2.05583944010913,4.33588919253145,1.43846196161075,0.512321413058201,1.41889337933151,4.48169384957604,2.5819387343353,4.06279459783025,1.50593871634084,2.18324920046277,2.9214052977861,4.59125838556354,6.09765151444578,1.27867425159808,0.329851300186716,0.398927315243264,0,4.06292934080018,5.10646702222026,5.60540024096017,1.50749199154046,2.08593167368081,0.868755378820466,1.81619850790011,3.68277635987565,8.22802207346299,0.633765858935825,1.06302149982522,0.628975936525128,0,0.600707571366025,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.665188192387692,0.087834785693126,0.982343066232845,0.728590576585084,0.741568885568859,0,0,0,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0,2.63560834872127,0,1.3082821564276,0,0.12663051166458,0,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0.448346041655403,0,0,0,0,0,0.309977343527296,0,0,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0.168776332241266,0.292311015483596,0,0.184099797284599,0,0,0.10075209822764,0.169560592310488,0.57978255948989,0,0.286804595389004,0.609868530647977,0.795178609928912,1.16193942869518,1.14027160516907,1.51392510525377,0.72995471815166,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,1.59884970106048,0,0.219500570817251,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0.335964256397719,0.283550194484773,0.179117045405697,0.290633938513962,0,0,0.792435906119034,0.207328115540772,0.144119953416961,0.50496973370552,0.126995788584338,1.52795370223311,0,0,0.205654985406647,0.600686115687835,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0,0,0,0.197030760201927,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.502548796003046,0,0,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0.431428401637234,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.232420756919918,1.81289174387433,0.200506470303285,0.184161977871793,0.114814448164607,0,0.131124414959424,1.35359883872224,0.385076685522074,0,0,0.422206515571503,0,0.170093705276516,0,1.54227252690289,0,0.501689773854853,0.254876273045038,0,0.447749509444357,0.219259876645935,0,0,0.656029291399411,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.413509717453592,0.214840489736547,0.290033387828457,0.426133137080504,0,0,0.192190067365106,0.382838137483752,0.10115778085555,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0.379473173765715,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0.962479855263359,0,0.185803175125719,0,0.355709216742071,0,0,0.383010740264733,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.935702702041099,0.146508179271894,0.242721043499027,0,0,0,0.296964680832639,0,1.9882952955326,0.703347082052564,0.445234820091624,0,1.05562704063997,0.19924798825107,0.276283915531148,0,0.306806047506464,0,0.311039587661807,0.179736702294654,0,0,0,0,0,3.87733098438087,3.15411533750294,0,0,0,0,0,0,0,0,0,0.347249989866585,3.54296554325536,0.120596438625408,6.10326945268333,4.86548743697388,6.50204761697804,3.07139556015562,0,0,0.461701551022782,0,0,1.34636466614658,0.325942115766024,0,0.366390373607449,0,0,0,0,0.225595660617181,0,0,0,0,0.210998064528027,0.652931232636591,0.989471500037586,0.432777279484182,0.995261931078505,0.530745387020035,0,5.04085918757057,4.4483018020741,3.65476823269094,0.202203398942031,0,3.51396668588009,0,0.586993856796269,0,0.789168805698781,0,0.91821828489147,0.126373159256976,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0.520679215005393,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.290967049465258,0.353024506766001,0.225980740780532,0,0,5.00155288051442,0.391102765469606,0,0,0.599428828746391,0.576361668616424,0.229073192331831,0.171594997861965,1.1524383839052,0.49701014226173,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0.525774708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| ||
|short_description=p2@CAMKK2 | |||
}} | }} |
Latest revision as of 21:52, 16 September 2015
Short description: | p2@CAMKK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAMKK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -220bp_to_ENST00000543477_5end |
EntrezGene: | CAMKK2 |
HGNC: | 1470 |
UniProt: | F5H4I7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.22e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.22e-34 | 42 |
defensive cell | 4.44e-31 | 48 |
phagocyte | 4.44e-31 | 48 |
monopoietic cell | 3.88e-23 | 59 |
monocyte | 3.88e-23 | 59 |
monoblast | 3.88e-23 | 59 |
promonocyte | 3.88e-23 | 59 |
macrophage dendritic cell progenitor | 4.06e-22 | 61 |
myeloid leukocyte | 1.61e-20 | 72 |
myeloid lineage restricted progenitor cell | 7.68e-20 | 66 |
granulocyte monocyte progenitor cell | 1.99e-19 | 67 |
myeloid cell | 5.95e-11 | 108 |
common myeloid progenitor | 5.95e-11 | 108 |
nongranular leukocyte | 5.99e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 2.81e-08 | 120 |
leukocyte | 8.45e-08 | 136 |