FFCP PHASE1:Hg19::chr9:2017063..2017144,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6595 | |EntrezGene=6595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11098 | |HGNC=11098 | ||
|TSSclassifier=strong | |||
|UniProt=F6RS74 | |UniProt=F6RS74 | ||
|association_with_transcript=0bp_to_ENST00000457226_5end | |association_with_transcript=0bp_to_ENST00000457226_5end | ||
|cluster_id=chr9:2017063..2017144,+ | |||
|description=CAGE_peak_4_at_SMARCA2_5end | |description=CAGE_peak_4_at_SMARCA2_5end | ||
|id=chr9:2017063..2017144,+ | |id=chr9:2017063..2017144,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.20e-07!52;CL:0000542!2.17e-07!53;CL:0000051!2.17e-07!53;CL:0000134!5.11e-07!358;CL:0000945!9.03e-07!24;CL:0000826!9.03e-07!24 | |ontology_enrichment_celltype=CL:0000838!1.20e-07!52;CL:0000542!2.17e-07!53;CL:0000051!2.17e-07!53;CL:0000134!5.11e-07!358;CL:0000945!9.03e-07!24;CL:0000826!9.03e-07!24 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.31e-07,52;CL:0000542,2.36e-07,53;CL:0000051,2.36e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.25e-08!115 | |ontology_enrichment_uberon=UBERON:0007023!4.25e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.47e-08,114 | |||
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| ||
|short_description=p4@SMARCA2 | |short_description=p4@SMARCA2 | ||
}} | }} |
Latest revision as of 21:38, 16 September 2015
Short description: | p4@SMARCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SMARCA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000457226_5end |
EntrezGene: | SMARCA2 |
HGNC: | 11098 |
UniProt: | F6RS74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.31e-07 | 52 |
lymphocyte | 2.36e-07 | 53 |
common lymphoid progenitor | 2.36e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.47e-08 | 114 |