FFCP PHASE1:Hg19::chr17:64960810..64960831,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:64960810..64960831,+ to FFCP PHASE1:Hg19::chr17:64960810..64960831,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27092 | |EntrezGene=27092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1408 | |HGNC=1408 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBN1 | |UniProt=Q9UBN1 | ||
|association_with_transcript=-148bp_to_NM_014405_5end | |||
|cluster_id=chr17:64960810..64960831,+ | |||
|coexpression_cluster_id=C3666 | |||
|description=CAGE_peak_1_at_CACNG4_5end | |||
|id=chr17:64960810..64960831,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.61e-10!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.24e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.00e-10,25;CL:0000133,4.70e-08,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.42e-09;82 | |||
|ontology_enrichment_disease=DOID:0050687!6.38e-13!143;DOID:305!3.06e-11!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.17e-08,143;DOID:305,6.21e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.14e-40!82;UBERON:0005743!7.10e-40!86;UBERON:0000073!6.27e-39!94;UBERON:0001016!6.27e-39!94;UBERON:0001049!1.11e-32!57;UBERON:0005068!1.11e-32!57;UBERON:0006241!1.11e-32!57;UBERON:0007135!1.11e-32!57;UBERON:0000955!3.76e-32!69;UBERON:0006238!3.76e-32!69;UBERON:0002616!8.10e-28!59;UBERON:0003075!1.38e-27!86;UBERON:0007284!1.38e-27!86;UBERON:0002346!2.83e-27!90;UBERON:0000924!6.42e-27!173;UBERON:0006601!6.42e-27!173;UBERON:0004121!8.00e-27!169;UBERON:0003080!1.44e-25!42;UBERON:0002780!3.69e-25!41;UBERON:0001890!3.69e-25!41;UBERON:0006240!3.69e-25!41;UBERON:0001893!8.63e-25!34;UBERON:0002020!1.33e-24!34;UBERON:0003528!1.33e-24!34;UBERON:0002791!4.37e-24!33;UBERON:0001869!1.60e-23!32;UBERON:0003056!6.05e-21!61;UBERON:0000033!1.85e-20!123;UBERON:0000153!9.66e-20!129;UBERON:0007811!9.66e-20!129;UBERON:0000956!4.02e-18!25;UBERON:0000203!4.02e-18!25;UBERON:0002619!8.27e-16!22;UBERON:0007023!1.42e-15!115;UBERON:0001950!1.36e-14!20;UBERON:0000064!4.87e-12!219;UBERON:0000062!1.80e-09!511;UBERON:0000475!5.00e-09!365;UBERON:0003076!3.06e-08!15;UBERON:0003057!3.06e-08!15;UBERON:0002420!5.04e-08!9;UBERON:0007245!5.04e-08!9;UBERON:0010009!5.04e-08!9;UBERON:0010011!5.04e-08!9;UBERON:0000454!5.04e-08!9;UBERON:0002308!6.29e-08!9;UBERON:0000125!6.29e-08!9;UBERON:0004732!4.37e-07!13;UBERON:0005631!7.96e-07!14;UBERON:0000158!7.96e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.25e-28;32!UBERON:0001893;2.51e-28;34!UBERON:0002791;2.55e-28;32!UBERON:0003528;2.96e-28;34!UBERON:0002020;2.96e-28;34!UBERON:0002780;1.41e-24;41!UBERON:0001890;1.41e-24;41!UBERON:0000956;7.31e-24;25!UBERON:0000203;7.31e-24;25!UBERON:0000073;6.78e-23;53!UBERON:0002616;6.78e-23;53!UBERON:0002619;1.02e-20;22!UBERON:0001950;4.67e-19;20!UBERON:0000955;4.61e-18;68!UBERON:0001017;1.60e-17;75!UBERON:0001016;3.47e-16;83!UBERON:0002420;2.46e-10;9!UBERON:0007245;2.46e-10;9!UBERON:0010009;2.46e-10;9!UBERON:0010011;2.46e-10;9!UBERON:0000454;2.46e-10;9!UBERON:0000125;3.41e-10;9!UBERON:0002308;3.41e-10;9!UBERON:0009663;1.45e-08;7!UBERON:0004732;3.32e-08;13!UBERON:0001871;1.23e-07;6!UBERON:0004733;2.90e-07;12!UBERON:0002028;2.90e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.94e-47,81;UBERON:0001016,1.97e-47,89;UBERON:0001049,9.21e-43,56;UBERON:0005068,9.21e-43,56;UBERON:0006241,9.21e-43,56;UBERON:0007135,9.21e-43,56;UBERON:0000073,5.44e-40,53;UBERON:0002616,5.44e-40,53;UBERON:0000955,4.11e-39,68;UBERON:0006238,4.11e-39,68;UBERON:0002780,4.76e-34,41;UBERON:0001890,4.76e-34,41;UBERON:0003080,4.76e-34,41;UBERON:0006240,4.76e-34,41;UBERON:0001893,5.33e-33,34;UBERON:0003528,9.60e-33,34;UBERON:0002020,9.60e-33,34;UBERON:0003075,1.90e-32,82;UBERON:0007284,1.90e-32,82;UBERON:0001869,2.79e-31,32;UBERON:0002791,5.19e-31,32;UBERON:0002346,6.23e-30,86;UBERON:0003056,7.76e-28,61;UBERON:0004121,4.90e-26,171;UBERON:0000924,4.90e-26,171;UBERON:0006601,4.90e-26,171;UBERON:0010371,1.91e-24,104;UBERON:0000956,5.83e-24,25;UBERON:0000203,5.83e-24,25;UBERON:0011216,1.42e-23,223;UBERON:0002619,7.94e-21,22;UBERON:0001950,3.52e-19,20;UBERON:0010314,2.46e-16,132;UBERON:0007023,4.18e-12,114;UBERON:0002420,2.66e-10,9;UBERON:0007245,2.66e-10,9;UBERON:0010009,2.66e-10,9;UBERON:0010011,2.66e-10,9;UBERON:0000454,2.66e-10,9;UBERON:0000125,3.59e-10,9;UBERON:0002308,3.59e-10,9;UBERON:0003076,8.32e-10,15;UBERON:0003057,8.32e-10,15;UBERON:0009663,1.63e-08,7;UBERON:0000025,2.39e-08,192;UBERON:0004732,2.86e-08,13;UBERON:0005631,5.21e-08,14;UBERON:0000158,5.21e-08,14;UBERON:0001871,1.06e-07,6;UBERON:0004733,2.50e-07,12;UBERON:0002028,2.50e-07,12;UBERON:0007277,2.50e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.09340350391728,6.99012390816551,14.7709507807934,0,0,0,0,0,0,8.37223194922158,0.408001382488506,11.2843699732112,30.6272506230231,44.4841881486874,10.2944964467738,0,0.164201178899891,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,2.3633704291017,0.665188192387692,1.22968699970376,4.06035134042909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,1.31693286264251,0,0,0,2.33206526395521,0.427114777637135,0,0,0,0,0,0,0,0,0,0,0.710019185033229,4.63459651847145,0.847802961552438,0,0,0,0.975789649036763,1.98794652482228,3.25343040034651,4.5610864206763,3.02785021050754,1.45990943630332,0,0,0,0,0,0.473227200159376,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,5.88034845542168,0,0,0,0,3.07471096357784,0.171567810298526,0.219500570817251,0,0,0.277765335475589,0,0,0,8.57884996815569,0,0,0,0,187.278442316348,173.414204743164,0,0,0,0,0.503946384596579,0,0,0,0.766765358330422,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,70.1301162853999,54.6587386202011,53.356928081661,29.8178952295141,52.9489163872125,0,0,0,0,0,0,2.28767947683888,4.46072471992904,2.05013139544115,1.40569697991256,0,0,1.03473071292505,0,0,0,0,8.92172901908225,0,0,0,7.27506171471023,19.9722527412596,15.7242952531434,0,0,0,0,0,0,0,0,0,0,0,0,7.00984807631409,0,0,0,0,0,1.35359883872224,0.616122696835318,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,1.31205858279882,0,1.44257416306811,2.7470839445503,1.32015199872941,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0.137836572484531,0,0.580066775656914,0.767039646744908,11.8412607410161,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0.86101074534246,0,3.10401107475673,2.75668080248351,0,0,0,0,0,0,0,0,1.1750647824022,0.962479855263359,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58116727106535,10.9876931908076,3.99308912729002,7.95318118213038,17.020999385672,0,0,0.422250816255987,0.597743964753209,0,4.53478946137697,24.8512898480236,0,0,1.79736702294654,7.16084698702437,0,0.295930216910801,0,0,16.4786566836187,5.75162208603478,55.8918634403344,141.151846508196,12.7691599994446,2.89999830173917,0.568967241427498,0,1.18193840883968,9.30807107751954,0.291604613383254,10.9383746807974,23.0292760311598,41.6057713257657,0,6.19243855614858,8.57088094965288,6.3621765174652,0,17.9856630119398,0.923403102045565,0,0.922255617552241,2.51321404347362,0.54323685961004,1.5950057986596,4.76307485689684,1.5991043280559,0,0,0,0,0,0,0,0,0,15.507116775119,5.08871057162187,0.432777279484182,0,0.0884575645033392,0,0,0,0.104421949505455,16.5806787132466,1.60515529459758,24.1292379097099,0,20.5447849878694,1.69946265673865,0.789168805698781,4.83962864194656,63.6631344191419,0.379119477770928,0.150323419414493,0.103688191397247,4.6525771089503,0.992975867626496,0.941798755221676,0,0.284609546029793,0.138674673013139,8.50442717842141,2.05784034570193,0.261177619741208,0.17472666824203,0,0,0,0,0.484945082442097,0,3.84167259326905,0,0,12.2822944154405,8.40870945759653,0,0.213452994739353,0.999048047910651,0.864542502924636,0.114536596165916,8.75134489096019,0,0,9.66345541928861,12.2313785466253,15.7950297931623,3.67193583490758,0,15.0105072177447,10.2679034168995,0,13.7524941254386,0,0.279282401272254,0.229160424011684,0.717873024576814,5.99037001496973,0,0,0.604651252380536,0,6.98975697164723,0.0787831823072236,0.0824158583811665,0,1.57483970423598,0,5.56660782866512,14.5737644539386,0.964518890790115,1.10031549277787,1.66176135211674,0,0,17.192124534221,9.39217125277945,0,0.83927341015997,0.211200673038813,0.717149357331379,27.2519580193612,0,0,3.051222451857,0,0,0,19.156830649998,0,0,2.49286601344276,0,0,10.9890512907318,7.40502569759064,1.88195521672762,40.1744562720503,3.63077202730162,1.25763444079733,5.79934677486074,0,0,0,0.638341257770182,0,0,0,0,3.76929831000562,7.08854543973589,7.80968095372564,8.76336514945499,1.72022758707021,5.87923973145317,11.8604129618042,0.276697269872462,0.249960815924213,0,0,0,19.670066043889,3.33318365804898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,1.26184898228651,0.192619830407303,5.36103978437314,1.56596575179127,4.0807066592209,0,0.489473409012935,6.62628712001503,25.0129172200387,1.97355644620836,0.883445729729405,1.15748422962549,0.675769762612291,1.53744911152768,17.96237777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| ||
|short_description=p1@CACNG4 | |||
}} | }} |
Latest revision as of 21:36, 16 September 2015
Short description: | p1@CACNG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CACNG4_5end |
Coexpression cluster: | C3666_MCF7_breast_Neural_brain_duodenum_temporal_parietal |
Association with transcript: | -148bp_to_NM_014405_5end |
EntrezGene: | CACNG4 |
HGNC: | 1408 |
UniProt: | Q9UBN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.00e-10 | 25 |
neurectodermal cell | 4.70e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.17e-08 | 143 |
carcinoma | 6.21e-08 | 106 |