FFCP PHASE1:Hg19::chr2:30143805..30143814,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=238 | |EntrezGene=238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=427 | |HGNC=427 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPW7 | |UniProt=E7EPW7 | ||
|association_with_transcript=-280bp_to_ENST00000431873_5end | |association_with_transcript=-280bp_to_ENST00000431873_5end | ||
|cluster_id=chr2:30143805..30143814,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_6_at_ALK_5end | |description=CAGE_peak_6_at_ALK_5end | ||
|id=chr2:30143805..30143814,- | |id=chr2:30143805..30143814,- | ||
|ontology_enrichment_celltype=CL:0000242!1.49e-19!2;CL:0000312!2.28e-08!5;CL:0000240!4.13e-07!6;CL:0000311!4.13e-07!6;CL:0000079!4.13e-07!6;CL:0000237!4.13e-07!6;CL:0000036!4.13e-07!6;CL:0000357!4.13e-07!6;CL:0000114!4.13e-07!6 | |ontology_enrichment_celltype=CL:0000242!1.49e-19!2;CL:0000312!2.28e-08!5;CL:0000240!4.13e-07!6;CL:0000311!4.13e-07!6;CL:0000079!4.13e-07!6;CL:0000237!4.13e-07!6;CL:0000036!4.13e-07!6;CL:0000357!4.13e-07!6;CL:0000114!4.13e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.52e-50;2!CL:0000333;4.21e-21;5!CL:0002321;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.07e-13,8;CL:0000133,9.44e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000133;7.96e-07;59 | |||
|ontology_enrichment_disease=DOID:169!3.24e-07!6 | |ontology_enrichment_disease=DOID:169!3.24e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:169;7.67e-18;6!DOID:171;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.67e-18,6;DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.34e-20!32;UBERON:0002780!8.35e-20!41;UBERON:0001890!8.35e-20!41;UBERON:0006240!8.35e-20!41;UBERON:0001893!2.36e-19!34;UBERON:0003080!2.60e-19!42;UBERON:0001049!6.40e-17!57;UBERON:0005068!6.40e-17!57;UBERON:0006241!6.40e-17!57;UBERON:0007135!6.40e-17!57;UBERON:0002616!2.67e-16!59;UBERON:0000073!6.02e-16!94;UBERON:0001016!6.02e-16!94;UBERON:0002791!9.11e-16!33;UBERON:0002020!2.74e-15!34;UBERON:0003528!2.74e-15!34;UBERON:0001950!8.69e-15!20;UBERON:0000955!1.64e-13!69;UBERON:0006238!1.64e-13!69;UBERON:0002619!1.81e-13!22;UBERON:0001017!1.86e-13!82;UBERON:0003056!6.02e-13!61;UBERON:0005743!9.30e-13!86;UBERON:0000956!7.22e-12!25;UBERON:0000203!7.22e-12!25;UBERON:0004121!7.42e-11!169;UBERON:0001871!1.01e-10!7;UBERON:0003075!1.03e-10!86;UBERON:0007284!1.03e-10!86;UBERON:0001874!1.19e-10!1;UBERON:0000924!1.51e-10!173;UBERON:0006601!1.51e-10!173;UBERON:0007190!2.28e-10!1;UBERON:0001882!3.61e-10!1;UBERON:0005403!3.61e-10!1;UBERON:0002346!3.62e-10!90;UBERON:0002022!4.75e-10!1;UBERON:0000369!5.21e-10!4;UBERON:0002435!5.21e-10!4;UBERON:0000204!5.21e-10!4;UBERON:0010082!5.21e-10!4;UBERON:0002420!1.22e-09!9;UBERON:0007245!1.22e-09!9;UBERON:0010009!1.22e-09!9;UBERON:0010011!1.22e-09!9;UBERON:0000454!1.22e-09!9;UBERON:0000013!1.70e-08!5;UBERON:0002410!1.70e-08!5;UBERON:0000349!4.22e-08!5;UBERON:0007023!1.09e-07!115;UBERON:0000200!6.11e-07!6;UBERON:0000033!6.18e-07!123 | |ontology_enrichment_uberon=UBERON:0001869!1.34e-20!32;UBERON:0002780!8.35e-20!41;UBERON:0001890!8.35e-20!41;UBERON:0006240!8.35e-20!41;UBERON:0001893!2.36e-19!34;UBERON:0003080!2.60e-19!42;UBERON:0001049!6.40e-17!57;UBERON:0005068!6.40e-17!57;UBERON:0006241!6.40e-17!57;UBERON:0007135!6.40e-17!57;UBERON:0002616!2.67e-16!59;UBERON:0000073!6.02e-16!94;UBERON:0001016!6.02e-16!94;UBERON:0002791!9.11e-16!33;UBERON:0002020!2.74e-15!34;UBERON:0003528!2.74e-15!34;UBERON:0001950!8.69e-15!20;UBERON:0000955!1.64e-13!69;UBERON:0006238!1.64e-13!69;UBERON:0002619!1.81e-13!22;UBERON:0001017!1.86e-13!82;UBERON:0003056!6.02e-13!61;UBERON:0005743!9.30e-13!86;UBERON:0000956!7.22e-12!25;UBERON:0000203!7.22e-12!25;UBERON:0004121!7.42e-11!169;UBERON:0001871!1.01e-10!7;UBERON:0003075!1.03e-10!86;UBERON:0007284!1.03e-10!86;UBERON:0001874!1.19e-10!1;UBERON:0000924!1.51e-10!173;UBERON:0006601!1.51e-10!173;UBERON:0007190!2.28e-10!1;UBERON:0001882!3.61e-10!1;UBERON:0005403!3.61e-10!1;UBERON:0002346!3.62e-10!90;UBERON:0002022!4.75e-10!1;UBERON:0000369!5.21e-10!4;UBERON:0002435!5.21e-10!4;UBERON:0000204!5.21e-10!4;UBERON:0010082!5.21e-10!4;UBERON:0002420!1.22e-09!9;UBERON:0007245!1.22e-09!9;UBERON:0010009!1.22e-09!9;UBERON:0010011!1.22e-09!9;UBERON:0000454!1.22e-09!9;UBERON:0000013!1.70e-08!5;UBERON:0002410!1.70e-08!5;UBERON:0000349!4.22e-08!5;UBERON:0007023!1.09e-07!115;UBERON:0000200!6.11e-07!6;UBERON:0000033!6.18e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0000010;2.19e-12;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0000010,2.19e-12,8 | |||
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|short_description=p6@ALK | |short_description=p6@ALK | ||
}} | }} |
Latest revision as of 21:31, 16 September 2015
Short description: | p6@ALK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ALK_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | -280bp_to_ENST00000431873_5end |
EntrezGene: | ALK |
HGNC: | 427 |
UniProt: | E7EPW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.07e-13 | 8 |
neurectodermal cell | 9.44e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.21e-21 | 5 |
autonomic nervous system | 4.21e-21 | 5 |
peripheral nervous system | 2.19e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.67e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |