FFCP PHASE1:Hg19::chr19:20607724..20607748,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=664701 | |EntrezGene=664701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=33875 | |HGNC=33875 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000502675,uc002now.1,uc002noz.2,uc010ecl.1,uc010ecm.2,uc010xrf.1_5end | |association_with_transcript=13bp_to_ENST00000502675,uc002now.1,uc002noz.2,uc010ecl.1,uc010ecm.2,uc010xrf.1_5end | ||
|cluster_id=chr19:20607724..20607748,- | |||
|coexpression_cluster_id=C1240 | |coexpression_cluster_id=C1240 | ||
|description=CAGE_peak_1_at_ZNF826P_5end | |description=CAGE_peak_1_at_ZNF826P_5end | ||
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|ontology_enrichment_celltype=CL:0002319!2.40e-07!25 | |ontology_enrichment_celltype=CL:0002319!2.40e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.62e-07;25 | |ontology_enrichment_celltype_v019=CL:0002319;1.62e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.60e-07,25;CL:0000047,9.23e-07,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.80e-19!86;UBERON:0002346!8.24e-19!90;UBERON:0000073!2.23e-18!94;UBERON:0001016!2.23e-18!94;UBERON:0003075!4.04e-18!86;UBERON:0007284!4.04e-18!86;UBERON:0001017!6.06e-18!82;UBERON:0000924!8.57e-18!173;UBERON:0006601!8.57e-18!173;UBERON:0004121!4.51e-17!169;UBERON:0003056!1.05e-15!61;UBERON:0001049!1.93e-13!57;UBERON:0005068!1.93e-13!57;UBERON:0006241!1.93e-13!57;UBERON:0007135!1.93e-13!57;UBERON:0000153!2.35e-13!129;UBERON:0007811!2.35e-13!129;UBERON:0000955!3.96e-13!69;UBERON:0006238!3.96e-13!69;UBERON:0002616!4.59e-13!59;UBERON:0000033!1.49e-12!123;UBERON:0002780!7.04e-11!41;UBERON:0001890!7.04e-11!41;UBERON:0006240!7.04e-11!41;UBERON:0003080!1.35e-10!42;UBERON:0007023!6.16e-09!115;UBERON:0002020!1.96e-08!34;UBERON:0003528!1.96e-08!34;UBERON:0001893!2.44e-08!34;UBERON:0002791!3.37e-08!33;UBERON:0001869!1.89e-07!32 | |ontology_enrichment_uberon=UBERON:0005743!3.80e-19!86;UBERON:0002346!8.24e-19!90;UBERON:0000073!2.23e-18!94;UBERON:0001016!2.23e-18!94;UBERON:0003075!4.04e-18!86;UBERON:0007284!4.04e-18!86;UBERON:0001017!6.06e-18!82;UBERON:0000924!8.57e-18!173;UBERON:0006601!8.57e-18!173;UBERON:0004121!4.51e-17!169;UBERON:0003056!1.05e-15!61;UBERON:0001049!1.93e-13!57;UBERON:0005068!1.93e-13!57;UBERON:0006241!1.93e-13!57;UBERON:0007135!1.93e-13!57;UBERON:0000153!2.35e-13!129;UBERON:0007811!2.35e-13!129;UBERON:0000955!3.96e-13!69;UBERON:0006238!3.96e-13!69;UBERON:0002616!4.59e-13!59;UBERON:0000033!1.49e-12!123;UBERON:0002780!7.04e-11!41;UBERON:0001890!7.04e-11!41;UBERON:0006240!7.04e-11!41;UBERON:0003080!1.35e-10!42;UBERON:0007023!6.16e-09!115;UBERON:0002020!1.96e-08!34;UBERON:0003528!1.96e-08!34;UBERON:0001893!2.44e-08!34;UBERON:0002791!3.37e-08!33;UBERON:0001869!1.89e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.26e-08;41!UBERON:0001890;1.26e-08;41!UBERON:0000073;1.28e-08;53!UBERON:0002616;1.28e-08;53!UBERON:0001893;2.91e-08;34!UBERON:0003528;3.26e-08;34!UBERON:0002020;3.26e-08;34!UBERON:0002791;8.45e-08;32!UBERON:0001869;1.37e-07;32!UBERON:0001017;3.03e-07;75!UBERON:0000955;3.36e-07;68!UBERON:0001016;6.86e-07;83 | |ontology_enrichment_uberon_v019=UBERON:0002780;1.26e-08;41!UBERON:0001890;1.26e-08;41!UBERON:0000073;1.28e-08;53!UBERON:0002616;1.28e-08;53!UBERON:0001893;2.91e-08;34!UBERON:0003528;3.26e-08;34!UBERON:0002020;3.26e-08;34!UBERON:0002791;8.45e-08;32!UBERON:0001869;1.37e-07;32!UBERON:0001017;3.03e-07;75!UBERON:0000955;3.36e-07;68!UBERON:0001016;6.86e-07;83 | ||
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|phase1_expression=2.90685406832891,1.2846031433459,2.11431606143957,3.00219895059391,2.68176656656373,0,0,1.26343974685366,0.261185628199839,3.44027511102112,0.697801167972428,7.20856528029568,1.84636884759917,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0,4.062994916534,0.816002764977012,0.626909442956176,6.01095572975219,6.29622355335267,4.77062030460251,0.764134057479513,0.656804715599566,0.865818594450472,0,0.383829398097213,0.309632246632152,0,1.8072355126695,0.369754010166788,2.78881922089086,8.38798471675787,3.22960483268332,0.553995408531877,0,0.434021741431704,2.01523926815932,1.6194683300949,2.06060454107349,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.628975936525128,0.561643155732475,0.600707571366025,1.12507910687956,1.14005097496499,0.39783335439818,0.182664153764634,1.75996244461323,2.73069305631066,3.55803701545422,3.84057200309856,5.20514783146816,3.4485146397269,4.62731410949403,3.81621501814146,0.569212969109448,2.93618594685469,0.382273228125229,2.64342657158052,2.80254281490768,4.47752944117631,1.57367816091066,0,0.822405995998037,3.17654341242288,2.60737813306872,2.36723902867367,3.89653456815823,0.668462741311041,2.3568472597987,2.43687284041983,5.95768500283034,0.512365278902701,1.69077151827842,0.493313713811028,1.38175008892924,1.15921234294021,1.33457906845854,1.87278579662799,1.04535523804977,1.35971211237079,1.91610246800961,2.74901956386104,3.28925599625354,2.54852331459277,0.651083453856419,0.950452044448374,1.50575119077773,1.79181255616186,2.49861453104692,1.89421801635213,1.64225599384209,0.80642697289893,1.87208137048455,0.579297615531196,0,3.35350429851818,1.66221330396589,0,0,0.289693037921647,1.5905718941022,0.486634870302636,5.0103453096956,3.99112915432615,3.68906099911129,2.16115474571226,0.728590576585084,2.96627554227544,0.324547393654683,0.348259474598534,1.32957960518865,0,0,0.74291500265913,0.39752481473341,0,0.347140501607594,0,0,0,0.208994966536811,0.775250277507987,0,1.00416183829401,0.402829317109147,0,0.24406205754817,1.10298924103761,0,4.10778750106767,3.59246996201872,2.92789849256638,0,0,0,0,0,3.92484646928281,1.98788780678127,0.379891534993739,0.529636723252875,0.860509862246441,1.06400514659507,0,0,0,4.04574346019696,1.75123873690594,4.08654757783647,2.57307626996383,0.576175924479999,3.28050004567315,1.24864030732128,0.570471821544449,0.896692083310806,5.16711794032565,8.7411389958791,8.14614678873041,2.24569588380383,4.54486974053541,0.413303124703062,0,0.741800787835671,0.910161361938026,0.718618141816238,6.73344455816265,5.38009635449446,2.77064115484183,1.75591048352335,0.612975591598039,0.300476117813194,1.92834711372036,2.51145489964407,0.85422955527427,1.90738711043606,1.20036438433761,1.54578793857658,1.03056216018252,1.67505170698431,0.337552664482532,0.779496041289589,0.757301322732344,0.920498986422993,1.13152239773168,0.355009592516614,2.01504196455281,2.37384829234683,0.57978255948989,1.09098448236334,0,13.7830287926443,12.5903279905411,12.2003640012994,6.94529068602982,19.1763846665478,39.4175547801896,1.56449532329816,1.28648187638577,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,2.21446636387394,2.80483547606892,1.6462960453256,1.47008711385542,0,0,0,6.18048339180511,0,4.80389868835872,2.52425656439839,1.1240175325762,3.31745608958382,1.01847289674383,0.977424915930974,3.11980435583874,2.88662684050547,4.40535538905292,1.05667824812239,0.721832238805369,2.77791307545966,0.570762456703795,0,0,0.738651018262192,0.468008530278475,0.891786973732369,0.93733833986777,3.19166043577833,2.41017665312057,1.16426079513703,4.06887513919547,1.15014803749563,0,0.176096868026452,0,1.58531948758658,0.75745460055828,0.444485260045183,0,0,0,0.205654985406647,0,0.571652865261156,5.7186853016134,2.61576041299968,8.43390286940925,0,0,8.45302752556,1.59562869950922,0,1.28603687131071,5.67396528093113,0.266422179016099,3.43147184779554,0,1.64648067356154,5.5375151329935,2.84313558994037,4.75171123760058,0.602878754119172,0.871533458600294,1.69954085009497,0,2.00902836572851,0,0.718874566474748,0,1.42636905040718,2.31650090668127,0.61642896765115,2.32779252211864,2.35378802386407,0.591092280605782,0.646882724578552,0.641715181398742,7.87693335089637,9.10978977003352,3.09315525111078,8.54332953205179,3.82763250991898,0,0,0,0.49076596687656,2.00068208423871,0.271265023699736,0.831883446123229,0.892144943985809,1.41932173530541,1.17141414992713,0.300946099727719,2.27407504055985,1.03473071292505,0.664225598535437,1.29058417979192,0.781952530212746,0.979005787313703,0.343143423810856,1.6541442089831,1.50999940573032,0.960548020230999,0.909382714338778,1.66435439510497,3.32629322662648,1.24053903909388,0.767309866440312,0.841980283299221,1.28139149255701,1.02341449813341,1.28683136914886,0,3.70103265126373,1.06537035187876,2.05317890034523,3.11552657510173,3.1376802184189,0,0.802025881213139,0.1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| ||
|short_description=p1@ZNF826P | |short_description=p1@ZNF826P | ||
}} | }} |
Latest revision as of 21:30, 16 September 2015
Short description: | p1@ZNF826P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF826P_5end |
Coexpression cluster: | C1240_testicular_iPS_HES3GFP_H9_teratocarcinoma_non_gall |
Association with transcript: | 13bp_to_ENST00000502675, uc002now.1, uc002noz.2, uc010ecl.1, uc010ecm.2, uc010xrf.1_5end |
EntrezGene: | ZNF826P |
HGNC: | 33875 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.60e-07 | 25 |
neuronal stem cell | 9.23e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.01e-19 | 81 |
nervous system | 6.82e-19 | 89 |
neurectoderm | 3.87e-18 | 86 |
neural plate | 1.87e-17 | 82 |
presumptive neural plate | 1.87e-17 | 82 |
structure with developmental contribution from neural crest | 3.92e-17 | 132 |
pre-chordal neural plate | 4.35e-17 | 61 |
ectoderm-derived structure | 5.32e-17 | 171 |
ectoderm | 5.32e-17 | 171 |
presumptive ectoderm | 5.32e-17 | 171 |
ecto-epithelium | 4.00e-15 | 104 |
neural tube | 1.12e-14 | 56 |
neural rod | 1.12e-14 | 56 |
future spinal cord | 1.12e-14 | 56 |
neural keel | 1.12e-14 | 56 |
brain | 5.14e-14 | 68 |
future brain | 5.14e-14 | 68 |
regional part of nervous system | 8.64e-14 | 53 |
regional part of brain | 8.64e-14 | 53 |
regional part of forebrain | 4.00e-12 | 41 |
forebrain | 4.00e-12 | 41 |
anterior neural tube | 4.00e-12 | 41 |
future forebrain | 4.00e-12 | 41 |
brain grey matter | 2.35e-09 | 34 |
gray matter | 2.35e-09 | 34 |
telencephalon | 3.01e-09 | 34 |
regional part of telencephalon | 1.30e-08 | 32 |
cerebral hemisphere | 3.07e-08 | 32 |
adult organism | 3.12e-07 | 114 |
cerebral cortex | 9.16e-07 | 25 |
pallium | 9.16e-07 | 25 |